RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 PODXL2Q9NZ53 605 aa22.48■■□□□ 1.19
RETREG1-201ENST00000306320 CDK19Q9BWU1 502 aa22.47■■□□□ 1.19
RETREG1-201ENST00000306320 KDM5AP29375 1690 aaKnown RBP22.47■■□□□ 1.19
RETREG1-201ENST00000306320 KIF1BO60333 1816 aa22.47■■□□□ 1.19
RETREG1-201ENST00000306320 RWDD1Q9H446 243 aaPredicted RBP22.46■■□□□ 1.19
RETREG1-201ENST00000306320 FSD2A1L4K1 749 aa22.46■■□□□ 1.19
RETREG1-201ENST00000306320 ITPRIPQ8IWB1 547 aa22.46■■□□□ 1.19
RETREG1-201ENST00000306320 DEPDC5O75140 1603 aa22.45■■□□□ 1.19
RETREG1-201ENST00000306320 PRDM10Q9NQV6 1147 aa22.45■■□□□ 1.18
RETREG1-201ENST00000306320 NKTRP30414 1462 aaKnown RBP22.45■■□□□ 1.18
RETREG1-201ENST00000306320 TXNDC2Q86VQ3 553 aa22.44■■□□□ 1.18
RETREG1-201ENST00000306320 VWDEQ8N2E2 1590 aa22.44■■□□□ 1.18
RETREG1-201ENST00000306320 MYOM1P52179 1685 aa22.44■■□□□ 1.18
RETREG1-201ENST00000306320 FRMPD1Q5SYB0 1578 aa22.43■■□□□ 1.18
RETREG1-201ENST00000306320 ARAP3Q8WWN8 1544 aa22.43■■□□□ 1.18
RETREG1-201ENST00000306320 RARSP54136 660 aaKnown RBP22.43■■□□□ 1.18
RETREG1-201ENST00000306320 TRMT2AQ8IZ69 625 aaKnown RBP22.43■■□□□ 1.18
RETREG1-201ENST00000306320 EXOSC9Q06265 439 aaKnown RBP22.43■■□□□ 1.18
RETREG1-201ENST00000306320 MPNDQ8N594 471 aa22.43■■□□□ 1.18
RETREG1-201ENST00000306320 DDX11L8A8MPP1 907 aa22.42■■□□□ 1.18
RETREG1-201ENST00000306320 FYB1O15117 783 aa22.42■■□□□ 1.18
RETREG1-201ENST00000306320 A0A1W2PP64 1363 aa22.42■■□□□ 1.18
RETREG1-201ENST00000306320 TNPO1Q92973 898 aaKnown RBP22.42■■□□□ 1.18
RETREG1-201ENST00000306320 FOXD4L5Q5VV16 416 aaPredicted RBP22.42■■□□□ 1.18
RETREG1-201ENST00000306320 FOXD4L4Q8WXT5 416 aaPredicted RBP22.42■■□□□ 1.18
RETREG1-201ENST00000306320 LNPKQ9C0E8 428 aa22.42■■□□□ 1.18
RETREG1-201ENST00000306320 MYOM2P54296 1465 aa22.41■■□□□ 1.18
RETREG1-201ENST00000306320 SLC24A1O60721 1099 aa22.41■■□□□ 1.18
RETREG1-201ENST00000306320 PDE3AQ14432 1141 aa22.4■■□□□ 1.18
RETREG1-201ENST00000306320 SMC4Q9NTJ3 1288 aa22.4■■□□□ 1.18
RETREG1-201ENST00000306320 DDX49Q9Y6V7 483 aaKnown RBP22.4■■□□□ 1.18
RETREG1-201ENST00000306320 RIPK4P57078 832 aa22.4■■□□□ 1.18
RETREG1-201ENST00000306320 ESF1Q9H501 851 aaKnown RBP22.4■■□□□ 1.18
RETREG1-201ENST00000306320 NASPP49321 788 aaPredicted RBP22.39■■□□□ 1.17
RETREG1-201ENST00000306320 ABCC3O15438 1527 aa22.38■■□□□ 1.17
RETREG1-201ENST00000306320 GBP4Q96PP9 640 aa22.37■■□□□ 1.17
RETREG1-201ENST00000306320 RPGRIP1LQ68CZ1 1315 aa22.37■■□□□ 1.17
RETREG1-201ENST00000306320 POLR3AO14802 1390 aaPredicted RBP22.37■■□□□ 1.17
RETREG1-201ENST00000306320 XPCQ01831 940 aaPredicted RBP22.36■■□□□ 1.17
RETREG1-201ENST00000306320 RRS1Q15050 365 aaKnown RBP22.36■■□□□ 1.17
RETREG1-201ENST00000306320 RBM42Q9BTD8 480 aaKnown RBP22.36■■□□□ 1.17
RETREG1-201ENST00000306320 NPC1L1Q9UHC9 1359 aa22.36■■□□□ 1.17
RETREG1-201ENST00000306320 SLC52A1Q9NWF4 448 aa22.36■■□□□ 1.17
RETREG1-201ENST00000306320 ADGRB3O60242 1522 aa22.35■■□□□ 1.17
RETREG1-201ENST00000306320 TERF2IPQ9NYB0 399 aa22.35■■□□□ 1.17
RETREG1-201ENST00000306320 EMILIN1Q9Y6C2 1016 aa22.35■■□□□ 1.17
RETREG1-201ENST00000306320 MLH3Q9UHC1 1453 aa22.35■■□□□ 1.17
RETREG1-201ENST00000306320 HDGFL2Q7Z4V5 671 aaPredicted RBP22.35■■□□□ 1.17
RETREG1-201ENST00000306320 NME9Q86XW9 330 aa22.34■■□□□ 1.17
RETREG1-201ENST00000306320 TMPOP42166 694 aaKnown RBP22.33■■□□□ 1.17
RETREG1-201ENST00000306320 SSFA2P28290 1259 aa22.33■■□□□ 1.16
RETREG1-201ENST00000306320 ZHX1Q9UKY1 873 aaPredicted RBP22.33■■□□□ 1.16
RETREG1-201ENST00000306320 HECW2Q9P2P5 1572 aa22.33■■□□□ 1.16
RETREG1-201ENST00000306320 INSRP06213 1382 aa22.32■■□□□ 1.16
RETREG1-201ENST00000306320 PRKAR2BP31323 418 aa22.32■■□□□ 1.16
RETREG1-201ENST00000306320 DIAPH1O60610 1272 aaKnown RBP22.32■■□□□ 1.16
RETREG1-201ENST00000306320 CEBPAP49715 358 aaPredicted RBP22.31■■□□□ 1.16
RETREG1-201ENST00000306320 ANKRD36BQ8N2N9 1353 aa22.31■■□□□ 1.16
RETREG1-201ENST00000306320 GOLGA6L22H0YM25 854 aa22.31■■□□□ 1.16
RETREG1-201ENST00000306320 DCTN1Q14203 1278 aa22.31■■□□□ 1.16
RETREG1-201ENST00000306320 FOXD4L6Q3SYB3 417 aaPredicted RBP22.31■■□□□ 1.16
RETREG1-201ENST00000306320 DNTTIP2Q5QJE6 756 aaKnown RBP22.31■■□□□ 1.16
RETREG1-201ENST00000306320 CAVIN1Q6NZI2 390 aaKnown RBP22.31■■□□□ 1.16
RETREG1-201ENST00000306320 FOXD4L3Q6VB84 417 aaPredicted RBP22.31■■□□□ 1.16
RETREG1-201ENST00000306320 SSH1Q8WYL5 1049 aa22.31■■□□□ 1.16
RETREG1-201ENST00000306320 ADGRB1O14514 1584 aa22.3■■□□□ 1.16
RETREG1-201ENST00000306320 TSPOAP1O95153 1857 aa22.3■■□□□ 1.16
RETREG1-201ENST00000306320 MCTP1Q6DN14 999 aa22.3■■□□□ 1.16
RETREG1-201ENST00000306320 PDCL3Q9H2J4 239 aa22.3■■□□□ 1.16
RETREG1-201ENST00000306320 SIGLEC1Q9BZZ2 1709 aa22.29■■□□□ 1.16
RETREG1-201ENST00000306320 TPM2P07951 284 aa22.29■■□□□ 1.16
RETREG1-201ENST00000306320 PHACTR3Q96KR7 559 aa22.29■■□□□ 1.16
RETREG1-201ENST00000306320 C1orf115Q9H7X2 142 aa22.29■■□□□ 1.16
RETREG1-201ENST00000306320 NOB1Q9ULX3 412 aaKnown RBP22.29■■□□□ 1.16
RETREG1-201ENST00000306320 QRICH2Q9H0J4 1663 aa22.29■■□□□ 1.16
RETREG1-201ENST00000306320 TULP4Q9NRJ4 1543 aa22.29■■□□□ 1.16
RETREG1-201ENST00000306320 RNF214Q8ND24 703 aa22.28■■□□□ 1.16
RETREG1-201ENST00000306320 DZIP1LQ8IYY4 767 aaKnown RBP22.28■■□□□ 1.16
RETREG1-201ENST00000306320 TRIM35Q9UPQ4 493 aa22.28■■□□□ 1.16
RETREG1-201ENST00000306320 NRXN1Q9ULB1 1477 aa22.27■■□□□ 1.16
RETREG1-201ENST00000306320 APBB1O00213 710 aa22.27■■□□□ 1.16
RETREG1-201ENST00000306320 FAM83GA6ND36 823 aa22.26■■□□□ 1.15
RETREG1-201ENST00000306320 SBNO2Q9Y2G9 1366 aa22.26■■□□□ 1.15
RETREG1-201ENST00000306320 CD2BP2O95400 341 aaKnown RBP22.26■■□□□ 1.15
RETREG1-201ENST00000306320 GLI2P10070 1586 aa22.26■■□□□ 1.15
RETREG1-201ENST00000306320 PTMAP06454 111 aaKnown RBP22.25■■□□□ 1.15
RETREG1-201ENST00000306320 ZKSCAN2Q63HK3 967 aa22.25■■□□□ 1.15
RETREG1-201ENST00000306320 CHAMP1Q96JM3 812 aa22.25■■□□□ 1.15
RETREG1-201ENST00000306320 SLC26A8Q96RN1 970 aa22.25■■□□□ 1.15
RETREG1-201ENST00000306320 UQCRHLA0A096LP55 91 aa22.25■■□□□ 1.15
RETREG1-201ENST00000306320 UQCRHP07919 91 aa22.25■■□□□ 1.15
RETREG1-201ENST00000306320 ANKRD45Q5TZF3 282 aa22.24■■□□□ 1.15
RETREG1-201ENST00000306320 WDR63Q8IWG1 891 aa22.24■■□□□ 1.15
RETREG1-201ENST00000306320 TRIM27P14373 513 aa22.24■■□□□ 1.15
RETREG1-201ENST00000306320 ZSCAN30Q86W11 494 aa22.24■■□□□ 1.15
RETREG1-201ENST00000306320 YTHDC2Q9H6S0 1430 aaKnown RBP22.24■■□□□ 1.15
RETREG1-201ENST00000306320 MVPQ14764 893 aaKnown RBP22.23■■□□□ 1.15
RETREG1-201ENST00000306320 POLKQ9UBT6 870 aa22.22■■□□□ 1.15
RETREG1-201ENST00000306320 LMTK2Q8IWU2 1503 aa22.22■■□□□ 1.15
RETREG1-201ENST00000306320 NLRP1Q9C000 1473 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms