RNA–Protein interactions for RNA: ENST00000306006.10

ZNF239-201, Transcript of zinc finger protein 239, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF239, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-201ENST00000306006 FBLN1P23142 703 aa12.51□□□□□ -0.41
ZNF239-201ENST00000306006 DUSP27Q5VZP5 1158 aa12.51□□□□□ -0.41
ZNF239-201ENST00000306006 ITSN1Q15811 1721 aa12.51□□□□□ -0.41
ZNF239-201ENST00000306006 NGEFQ8N5V2 710 aa12.5□□□□□ -0.41
ZNF239-201ENST00000306006 ZNF692Q9BU19 519 aaPredicted RBP12.5□□□□□ -0.41
ZNF239-201ENST00000306006 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
ZNF239-201ENST00000306006 PIK3R4Q99570 1358 aa12.5□□□□□ -0.41
ZNF239-201ENST00000306006 U2AF1L5P0DN76 240 aaPredicted RBP12.5□□□□□ -0.41
ZNF239-201ENST00000306006 RRP1P56182 461 aaKnown RBP12.5□□□□□ -0.41
ZNF239-201ENST00000306006 U2AF1Q01081 240 aaKnown RBP eCLIP12.5□□□□□ -0.41
ZNF239-201ENST00000306006 SLFN5Q08AF3 891 aa12.5□□□□□ -0.41
ZNF239-201ENST00000306006 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
ZNF239-201ENST00000306006 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
ZNF239-201ENST00000306006 IQSEC2Q5JU85 1478 aa12.49□□□□□ -0.41
ZNF239-201ENST00000306006 PNPLA6Q8IY17 1366 aa12.49□□□□□ -0.41
ZNF239-201ENST00000306006 NKTRP30414 1462 aaKnown RBP12.49□□□□□ -0.41
ZNF239-201ENST00000306006 TRMT2AQ8IZ69 625 aaKnown RBP12.49□□□□□ -0.41
ZNF239-201ENST00000306006 TCP11L2Q8N4U5 519 aa12.49□□□□□ -0.41
ZNF239-201ENST00000306006 POLKQ9UBT6 870 aa12.49□□□□□ -0.41
ZNF239-201ENST00000306006 DMRT2Q9Y5R5 561 aa12.49□□□□□ -0.41
ZNF239-201ENST00000306006 ACEP12821 1306 aa12.49□□□□□ -0.41
ZNF239-201ENST00000306006 RRP7AQ9Y3A4 280 aaKnown RBP12.48□□□□□ -0.41
ZNF239-201ENST00000306006 U2SURPO15042 1029 aaKnown RBP12.48□□□□□ -0.41
ZNF239-201ENST00000306006 WWC1Q8IX03 1113 aa12.48□□□□□ -0.41
ZNF239-201ENST00000306006 NEUROD2Q15784 382 aa12.47□□□□□ -0.41
ZNF239-201ENST00000306006 MAP2P11137 1827 aaKnown RBP12.47□□□□□ -0.41
ZNF239-201ENST00000306006 DIAPH1O60610 1272 aaKnown RBP12.47□□□□□ -0.41
ZNF239-201ENST00000306006 COG3Q96JB2 828 aa12.47□□□□□ -0.41
ZNF239-201ENST00000306006 PPM1GO15355 546 aaPredicted RBP12.46□□□□□ -0.41
ZNF239-201ENST00000306006 B4GALNT3Q6L9W6 998 aa12.46□□□□□ -0.41
ZNF239-201ENST00000306006 TTC21BQ7Z4L5 1316 aa12.46□□□□□ -0.41
ZNF239-201ENST00000306006 NRKQ7Z2Y5 1582 aa12.46□□□□□ -0.41
ZNF239-201ENST00000306006 CHD2O14647 1828 aaKnown RBP12.46□□□□□ -0.41
ZNF239-201ENST00000306006 USP6P35125 1406 aa12.46□□□□□ -0.42
ZNF239-201ENST00000306006 E9PSI1 815 aa12.45□□□□□ -0.42
ZNF239-201ENST00000306006 PHF23Q9BUL5 403 aaPredicted RBP12.45□□□□□ -0.42
ZNF239-201ENST00000306006 EMILIN1Q9Y6C2 1016 aa12.45□□□□□ -0.42
ZNF239-201ENST00000306006 RGPD8O14715 1765 aaPredicted RBP12.45□□□□□ -0.42
ZNF239-201ENST00000306006 PMFBP1Q8TBY8 1022 aa12.45□□□□□ -0.42
ZNF239-201ENST00000306006 PLEKHF1Q96S99 279 aa12.45□□□□□ -0.42
ZNF239-201ENST00000306006 AATKQ6ZMQ8 1374 aa12.45□□□□□ -0.42
ZNF239-201ENST00000306006 NPHP4O75161 1426 aaPredicted RBP12.44□□□□□ -0.42
ZNF239-201ENST00000306006 PLIN1O60240 522 aa12.43□□□□□ -0.42
ZNF239-201ENST00000306006 SSH2Q76I76 1423 aa12.43□□□□□ -0.42
ZNF239-201ENST00000306006 CCDC27Q2M243 656 aa12.43□□□□□ -0.42
ZNF239-201ENST00000306006 RRS1Q15050 365 aaKnown RBP12.42□□□□□ -0.42
ZNF239-201ENST00000306006 NCBP3Q53F19 620 aaKnown RBP12.42□□□□□ -0.42
ZNF239-201ENST00000306006 CDK12Q9NYV4 1490 aaPredicted RBP12.42□□□□□ -0.42
ZNF239-201ENST00000306006 RBM33Q96EV2 1170 aaKnown RBP12.42□□□□□ -0.42
ZNF239-201ENST00000306006 ANKARQ7Z5J8 1434 aa12.42□□□□□ -0.42
ZNF239-201ENST00000306006 FMN2Q9NZ56 1722 aa12.42□□□□□ -0.42
ZNF239-201ENST00000306006 OVOS2A0A0J9YW53 1432 aa12.41□□□□□ -0.42
ZNF239-201ENST00000306006 OVOS2Q6IE36 1432 aa12.41□□□□□ -0.42
ZNF239-201ENST00000306006 WDR63Q8IWG1 891 aa12.41□□□□□ -0.42
ZNF239-201ENST00000306006 NGDNQ8NEJ9 315 aaKnown RBP12.41□□□□□ -0.42
ZNF239-201ENST00000306006 EXOC6Q8TAG9 804 aa12.41□□□□□ -0.42
ZNF239-201ENST00000306006 NALCNQ8IZF0 1738 aa12.41□□□□□ -0.42
ZNF239-201ENST00000306006 IL13P35225 146 aa12.4□□□□□ -0.42
ZNF239-201ENST00000306006 TMPOP42166 694 aaKnown RBP12.4□□□□□ -0.42
ZNF239-201ENST00000306006 TSHZ2Q9NRE2 1034 aa12.4□□□□□ -0.42
ZNF239-201ENST00000306006 MAPK8IP3Q9UPT6 1336 aa12.4□□□□□ -0.42
ZNF239-201ENST00000306006 FCHSD2O94868 740 aa12.4□□□□□ -0.43
ZNF239-201ENST00000306006 TTC21AQ8NDW8 1320 aa12.39□□□□□ -0.43
ZNF239-201ENST00000306006 RSPH6AQ9H0K4 717 aa12.39□□□□□ -0.43
ZNF239-201ENST00000306006 LRRC7Q96NW7 1537 aa12.39□□□□□ -0.43
ZNF239-201ENST00000306006 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
ZNF239-201ENST00000306006 PNNQ9H307 717 aaKnown RBP12.38□□□□□ -0.43
ZNF239-201ENST00000306006 TRIM35Q9UPQ4 493 aa12.38□□□□□ -0.43
ZNF239-201ENST00000306006 USP31Q70CQ4 1352 aa12.38□□□□□ -0.43
ZNF239-201ENST00000306006 HMOX1P09601 288 aa12.37□□□□□ -0.43
ZNF239-201ENST00000306006 PRKAR2BP31323 418 aa12.37□□□□□ -0.43
ZNF239-201ENST00000306006 C20orf194Q5TEA3 1177 aa12.37□□□□□ -0.43
ZNF239-201ENST00000306006 ADGRL3Q9HAR2 1447 aa12.37□□□□□ -0.43
ZNF239-201ENST00000306006 CRBNQ96SW2 442 aa12.36□□□□□ -0.43
ZNF239-201ENST00000306006 BCAR3O75815 825 aa12.36□□□□□ -0.43
ZNF239-201ENST00000306006 RIPK4P57078 832 aa12.36□□□□□ -0.43
ZNF239-201ENST00000306006 PIK3C2AO00443 1686 aa12.35□□□□□ -0.43
ZNF239-201ENST00000306006 SOX12O15370 315 aa12.35□□□□□ -0.43
ZNF239-201ENST00000306006 PHACTR3Q96KR7 559 aa12.35□□□□□ -0.43
ZNF239-201ENST00000306006 PEAK1Q9H792 1746 aa12.35□□□□□ -0.43
ZNF239-201ENST00000306006 MYH16Q9H6N6 1097 aa12.35□□□□□ -0.43
ZNF239-201ENST00000306006 NWD1Q149M9 1564 aa12.34□□□□□ -0.43
ZNF239-201ENST00000306006 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.34□□□□□ -0.43
ZNF239-201ENST00000306006 PHF8Q9UPP1 1060 aa12.34□□□□□ -0.43
ZNF239-201ENST00000306006 EIF4A2Q14240 407 aaKnown RBP12.34□□□□□ -0.43
ZNF239-201ENST00000306006 NEFMP07197 916 aa12.33□□□□□ -0.44
ZNF239-201ENST00000306006 C14orf37Q86TY3 774 aa12.33□□□□□ -0.44
ZNF239-201ENST00000306006 NLRP6P59044 892 aa12.33□□□□□ -0.44
ZNF239-201ENST00000306006 HSP90AB2PQ58FF8 381 aa12.33□□□□□ -0.44
ZNF239-201ENST00000306006 MAP3K19Q56UN5 1328 aa12.33□□□□□ -0.44
ZNF239-201ENST00000306006 NFE2L2Q16236 605 aa12.32□□□□□ -0.44
ZNF239-201ENST00000306006 NUTM2GQ5VZR2 741 aa12.32□□□□□ -0.44
ZNF239-201ENST00000306006 TSR2Q969E8 191 aaKnown RBP12.32□□□□□ -0.44
ZNF239-201ENST00000306006 IL16Q14005 1332 aa12.32□□□□□ -0.44
ZNF239-201ENST00000306006 FANCIQ9NVI1 1328 aa12.32□□□□□ -0.44
ZNF239-201ENST00000306006 RARSP54136 660 aaKnown RBP12.32□□□□□ -0.44
ZNF239-201ENST00000306006 PROSER2Q86WR7 435 aaPredicted RBP12.32□□□□□ -0.44
ZNF239-201ENST00000306006 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
ZNF239-201ENST00000306006 ESCO1Q5FWF5 840 aa12.31□□□□□ -0.44
ZNF239-201ENST00000306006 MARF1Q9Y4F3 1742 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms