RNA–Protein interactions for RNA: ENST00000305510.3

CNNM3-201, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNNM3, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-201ENST00000305510 CHMP5Q9NZZ3 219 aa22.55■■□□□ 1.2
CNNM3-201ENST00000305510 R3HCC1Q9Y3T6 440 aaKnown RBP22.55■■□□□ 1.2
CNNM3-201ENST00000305510 PTPRTO14522 1441 aa22.55■■□□□ 1.2
CNNM3-201ENST00000305510 RRS1Q15050 365 aaKnown RBP22.54■■□□□ 1.2
CNNM3-201ENST00000305510 POLR3AO14802 1390 aaPredicted RBP22.53■■□□□ 1.2
CNNM3-201ENST00000305510 MSNP26038 577 aaKnown RBP22.53■■□□□ 1.2
CNNM3-201ENST00000305510 GAS2L3Q86XJ1 694 aa22.53■■□□□ 1.2
CNNM3-201ENST00000305510 RTEL1-TNFRSF6BF6WH68 1400 aa22.52■■□□□ 1.2
CNNM3-201ENST00000305510 PDE4CQ08493 712 aa22.52■■□□□ 1.2
CNNM3-201ENST00000305510 ATF7IPQ6VMQ6 1270 aa22.51■■□□□ 1.19
CNNM3-201ENST00000305510 TXNDC2Q86VQ3 553 aa22.51■■□□□ 1.19
CNNM3-201ENST00000305510 C22orf23Q9BZE7 217 aa22.51■■□□□ 1.19
CNNM3-201ENST00000305510 EMILIN1Q9Y6C2 1016 aa22.51■■□□□ 1.19
CNNM3-201ENST00000305510 MADDQ8WXG6 1647 aa22.51■■□□□ 1.19
CNNM3-201ENST00000305510 TBC1D32Q96NH3 1257 aa22.5■■□□□ 1.19
CNNM3-201ENST00000305510 TRPM2O94759 1503 aa22.5■■□□□ 1.19
CNNM3-201ENST00000305510 NPATQ14207 1427 aa22.5■■□□□ 1.19
CNNM3-201ENST00000305510 PLXNC1O60486 1568 aa22.5■■□□□ 1.19
CNNM3-201ENST00000305510 NGEFQ8N5V2 710 aa22.5■■□□□ 1.19
CNNM3-201ENST00000305510 ZFYVE16Q7Z3T8 1539 aa22.49■■□□□ 1.19
CNNM3-201ENST00000305510 FAM83GA6ND36 823 aa22.48■■□□□ 1.19
CNNM3-201ENST00000305510 DDX11L8A8MPP1 907 aa22.48■■□□□ 1.19
CNNM3-201ENST00000305510 ANP32BQ92688 251 aaKnown RBP22.48■■□□□ 1.19
CNNM3-201ENST00000305510 INSRP06213 1382 aa22.48■■□□□ 1.19
CNNM3-201ENST00000305510 DDX19BQ9UMR2 479 aa22.48■■□□□ 1.19
CNNM3-201ENST00000305510 IPO8O15397 1037 aaKnown RBP22.47■■□□□ 1.19
CNNM3-201ENST00000305510 PHACTR3Q96KR7 559 aa22.47■■□□□ 1.19
CNNM3-201ENST00000305510 NPC1L1Q9UHC9 1359 aa22.47■■□□□ 1.19
CNNM3-201ENST00000305510 FAM69CQ0P6D2 419 aa22.47■■□□□ 1.19
CNNM3-201ENST00000305510 A0A1W2PP64 1363 aa22.46■■□□□ 1.19
CNNM3-201ENST00000305510 TPRNQ4KMQ1 711 aa22.46■■□□□ 1.19
CNNM3-201ENST00000305510 NME9Q86XW9 330 aa22.46■■□□□ 1.19
CNNM3-201ENST00000305510 TRIM35Q9UPQ4 493 aa22.46■■□□□ 1.19
CNNM3-201ENST00000305510 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.46■■□□□ 1.19
CNNM3-201ENST00000305510 HSCBQ8IWL3 235 aa22.45■■□□□ 1.19
CNNM3-201ENST00000305510 OFD1O75665 1012 aa22.45■■□□□ 1.18
CNNM3-201ENST00000305510 HSP90AB1P08238 724 aaKnown RBP22.45■■□□□ 1.18
CNNM3-201ENST00000305510 ZSCAN30Q86W11 494 aa22.45■■□□□ 1.18
CNNM3-201ENST00000305510 TSPYL6Q8N831 410 aa22.45■■□□□ 1.18
CNNM3-201ENST00000305510 MAP7D2Q96T17 732 aa22.43■■□□□ 1.18
CNNM3-201ENST00000305510 SYNMO15061 1565 aa22.43■■□□□ 1.18
CNNM3-201ENST00000305510 ISY1Q9ULR0 285 aaKnown RBP22.42■■□□□ 1.18
CNNM3-201ENST00000305510 NECTIN2Q92692 538 aa22.41■■□□□ 1.18
CNNM3-201ENST00000305510 UQCRHLA0A096LP55 91 aa22.41■■□□□ 1.18
CNNM3-201ENST00000305510 UQCRHP07919 91 aa22.41■■□□□ 1.18
CNNM3-201ENST00000305510 NASPP49321 788 aaPredicted RBP22.4■■□□□ 1.18
CNNM3-201ENST00000305510 C14orf37Q86TY3 774 aa22.4■■□□□ 1.18
CNNM3-201ENST00000305510 MIS18AQ9NYP9 233 aa22.4■■□□□ 1.18
CNNM3-201ENST00000305510 KDM5AP29375 1690 aaKnown RBP22.4■■□□□ 1.18
CNNM3-201ENST00000305510 SLC4A10Q6U841 1118 aa22.4■■□□□ 1.18
CNNM3-201ENST00000305510 KRT24Q2M2I5 525 aa22.39■■□□□ 1.18
CNNM3-201ENST00000305510 ANKRD36BQ8N2N9 1353 aa22.39■■□□□ 1.17
CNNM3-201ENST00000305510 RPGRIP1LQ68CZ1 1315 aa22.39■■□□□ 1.17
CNNM3-201ENST00000305510 CCDC173Q0VFZ6 552 aa22.38■■□□□ 1.17
CNNM3-201ENST00000305510 BBXQ8WY36 941 aaPredicted RBP22.38■■□□□ 1.17
CNNM3-201ENST00000305510 SMAP1Q8IYB5 467 aaPredicted RBP22.38■■□□□ 1.17
CNNM3-201ENST00000305510 XPCQ01831 940 aaPredicted RBP22.37■■□□□ 1.17
CNNM3-201ENST00000305510 SPHKAPQ2M3C7 1700 aa22.37■■□□□ 1.17
CNNM3-201ENST00000305510 NCLP19338 710 aaKnown RBP22.37■■□□□ 1.17
CNNM3-201ENST00000305510 SLC52A1Q9NWF4 448 aa22.37■■□□□ 1.17
CNNM3-201ENST00000305510 ATAD2Q6PL18 1390 aa22.36■■□□□ 1.17
CNNM3-201ENST00000305510 ZNF518AQ6AHZ1 1483 aa22.36■■□□□ 1.17
CNNM3-201ENST00000305510 POLKQ9UBT6 870 aa22.35■■□□□ 1.17
CNNM3-201ENST00000305510 NLRP1Q9C000 1473 aa22.35■■□□□ 1.17
CNNM3-201ENST00000305510 NUTM2GQ5VZR2 741 aa22.34■■□□□ 1.17
CNNM3-201ENST00000305510 TNPO1Q92973 898 aaKnown RBP22.34■■□□□ 1.17
CNNM3-201ENST00000305510 COG3Q96JB2 828 aa22.34■■□□□ 1.17
CNNM3-201ENST00000305510 RBM42Q9BTD8 480 aaKnown RBP22.34■■□□□ 1.17
CNNM3-201ENST00000305510 ABCA6Q8N139 1617 aa22.34■■□□□ 1.17
CNNM3-201ENST00000305510 TWISTNBQ3B726 338 aaPredicted RBP22.34■■□□□ 1.17
CNNM3-201ENST00000305510 FOXD4L5Q5VV16 416 aaPredicted RBP22.33■■□□□ 1.17
CNNM3-201ENST00000305510 FOXD4L4Q8WXT5 416 aaPredicted RBP22.33■■□□□ 1.17
CNNM3-201ENST00000305510 GBP4Q96PP9 640 aa22.33■■□□□ 1.16
CNNM3-201ENST00000305510 LTV1Q96GA3 475 aaPredicted RBP22.32■■□□□ 1.16
CNNM3-201ENST00000305510 MCM10Q7L590 875 aa22.32■■□□□ 1.16
CNNM3-201ENST00000305510 PLEKHF1Q96S99 279 aa22.32■■□□□ 1.16
CNNM3-201ENST00000305510 CHD1LQ86WJ1 897 aa22.32■■□□□ 1.16
CNNM3-201ENST00000305510 BCL11BQ9C0K0 894 aaPredicted RBP22.32■■□□□ 1.16
CNNM3-201ENST00000305510 KIF16BQ96L93 1317 aa22.32■■□□□ 1.16
CNNM3-201ENST00000305510 CCDC27Q2M243 656 aa22.31■■□□□ 1.16
CNNM3-201ENST00000305510 SULT6B1Q6IMI4 303 aa22.31■■□□□ 1.16
CNNM3-201ENST00000305510 MAP3K4Q9Y6R4 1608 aa22.31■■□□□ 1.16
CNNM3-201ENST00000305510 AEBP1Q8IUX7 1158 aa22.31■■□□□ 1.16
CNNM3-201ENST00000305510 NOL8Q76FK4 1167 aaKnown RBP22.3■■□□□ 1.16
CNNM3-201ENST00000305510 C8orf58Q8NAV2 365 aa22.3■■□□□ 1.16
CNNM3-201ENST00000305510 UHRF1BP1LA0JNW5 1464 aa22.3■■□□□ 1.16
CNNM3-201ENST00000305510 IQGAP1P46940 1657 aa22.3■■□□□ 1.16
CNNM3-201ENST00000305510 MBIPQ9NS73 344 aa22.29■■□□□ 1.16
CNNM3-201ENST00000305510 FCHSD2O94868 740 aa22.29■■□□□ 1.16
CNNM3-201ENST00000305510 TET3O43151 1660 aa22.29■■□□□ 1.16
CNNM3-201ENST00000305510 LAMC1P11047 1609 aa22.29■■□□□ 1.16
CNNM3-201ENST00000305510 ZBTB40Q9NUA8 1239 aa22.28■■□□□ 1.16
CNNM3-201ENST00000305510 NINLQ9Y2I6 1382 aa22.28■■□□□ 1.16
CNNM3-201ENST00000305510 C16orf71Q8IYS4 520 aaPredicted RBP22.28■■□□□ 1.16
CNNM3-201ENST00000305510 ZNF428Q96B54 188 aa22.28■■□□□ 1.16
CNNM3-201ENST00000305510 SMARCA5O60264 1052 aaPredicted RBP22.27■■□□□ 1.16
CNNM3-201ENST00000305510 SLC26A8Q96RN1 970 aa22.27■■□□□ 1.16
CNNM3-201ENST00000305510 RNF17Q9BXT8 1623 aaKnown RBP22.27■■□□□ 1.16
CNNM3-201ENST00000305510 YEATS2Q9ULM3 1422 aa22.27■■□□□ 1.16
CNNM3-201ENST00000305510 SKOR2Q2VWA4 1001 aaPredicted RBP22.27■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms