RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 LRRC59Q96AG4 307 aaKnown RBP18.6■□□□□ 0.57
RAB40A-201ENST00000304236 CARD14Q9BXL6 1004 aa18.6■□□□□ 0.57
RAB40A-201ENST00000304236 SHPRHQ149N8 1683 aa18.59■□□□□ 0.57
RAB40A-201ENST00000304236 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.59■□□□□ 0.57
RAB40A-201ENST00000304236 MS4A1P11836 297 aa18.59■□□□□ 0.57
RAB40A-201ENST00000304236 ZNF772Q68DY9 489 aaPredicted RBP18.59■□□□□ 0.57
RAB40A-201ENST00000304236 SETD1AO15047 1707 aaKnown RBP18.59■□□□□ 0.57
RAB40A-201ENST00000304236 POLR3AO14802 1390 aaPredicted RBP18.58■□□□□ 0.57
RAB40A-201ENST00000304236 NALCNQ8IZF0 1738 aa18.58■□□□□ 0.57
RAB40A-201ENST00000304236 NUTM2BA6NNL0 878 aaPredicted RBP18.58■□□□□ 0.56
RAB40A-201ENST00000304236 NUTM2EB1AL46 878 aaPredicted RBP18.58■□□□□ 0.56
RAB40A-201ENST00000304236 NUTM2AQ8IVF1 878 aaPredicted RBP18.58■□□□□ 0.56
RAB40A-201ENST00000304236 ANP32AP39687 249 aaKnown RBP18.57■□□□□ 0.56
RAB40A-201ENST00000304236 SLFN5Q08AF3 891 aa18.57■□□□□ 0.56
RAB40A-201ENST00000304236 C1orf167Q5SNV9 1468 aa18.57■□□□□ 0.56
RAB40A-201ENST00000304236 CRBNQ96SW2 442 aa18.57■□□□□ 0.56
RAB40A-201ENST00000304236 TRAK1Q9UPV9 953 aa18.57■□□□□ 0.56
RAB40A-201ENST00000304236 TRMT2AQ8IZ69 625 aaKnown RBP18.56■□□□□ 0.56
RAB40A-201ENST00000304236 NHSL1Q5SYE7 1610 aa18.55■□□□□ 0.56
RAB40A-201ENST00000304236 USP32Q8NFA0 1604 aa18.55■□□□□ 0.56
RAB40A-201ENST00000304236 PLIN1O60240 522 aa18.55■□□□□ 0.56
RAB40A-201ENST00000304236 DDX17Q92841 729 aaKnown RBP18.55■□□□□ 0.56
RAB40A-201ENST00000304236 NSD3Q9BZ95 1437 aa18.54■□□□□ 0.56
RAB40A-201ENST00000304236 NOP58Q9Y2X3 529 aaKnown RBP18.53■□□□□ 0.56
RAB40A-201ENST00000304236 E9PSI1 815 aa18.52■□□□□ 0.56
RAB40A-201ENST00000304236 ORAI2Q96SN7 254 aa18.52■□□□□ 0.56
RAB40A-201ENST00000304236 APAF1O14727 1248 aa18.51■□□□□ 0.55
RAB40A-201ENST00000304236 MORC1Q86VD1 984 aa18.51■□□□□ 0.55
RAB40A-201ENST00000304236 STK26Q9P289 416 aa18.51■□□□□ 0.55
RAB40A-201ENST00000304236 PNPLA6Q8IY17 1366 aa18.51■□□□□ 0.55
RAB40A-201ENST00000304236 CCDC146Q8IYE0 955 aa18.51■□□□□ 0.55
RAB40A-201ENST00000304236 IPO9Q96P70 1041 aaKnown RBP18.51■□□□□ 0.55
RAB40A-201ENST00000304236 EVC2Q86UK5 1308 aa18.51■□□□□ 0.55
RAB40A-201ENST00000304236 TMEM132EQ6IEE7 984 aa18.5■□□□□ 0.55
RAB40A-201ENST00000304236 ARHGEF28Q8N1W1 1705 aaKnown RBP18.49■□□□□ 0.55
RAB40A-201ENST00000304236 SOS2Q07890 1332 aaPredicted RBP18.49■□□□□ 0.55
RAB40A-201ENST00000304236 NSD2O96028 1365 aa18.49■□□□□ 0.55
RAB40A-201ENST00000304236 ABCC11Q96J66 1382 aa18.49■□□□□ 0.55
RAB40A-201ENST00000304236 TECPR2O15040 1411 aa18.48■□□□□ 0.55
RAB40A-201ENST00000304236 SLC12A5Q9H2X9 1139 aa18.48■□□□□ 0.55
RAB40A-201ENST00000304236 AFF2P51816 1311 aa18.48■□□□□ 0.55
RAB40A-201ENST00000304236 CGNL1Q0VF96 1302 aa18.48■□□□□ 0.55
RAB40A-201ENST00000304236 RXRBP28702 533 aa18.48■□□□□ 0.55
RAB40A-201ENST00000304236 WAPLQ7Z5K2 1190 aa18.48■□□□□ 0.55
RAB40A-201ENST00000304236 PDE4AP27815 886 aa18.47■□□□□ 0.55
RAB40A-201ENST00000304236 ESCO1Q5FWF5 840 aa18.47■□□□□ 0.55
RAB40A-201ENST00000304236 BACH2Q9BYV9 841 aa18.46■□□□□ 0.55
RAB40A-201ENST00000304236 C20orf194Q5TEA3 1177 aa18.46■□□□□ 0.55
RAB40A-201ENST00000304236 CENPQQ7L2Z9 268 aaPredicted RBP18.46■□□□□ 0.55
RAB40A-201ENST00000304236 C8orf37Q96NL8 207 aa18.46■□□□□ 0.55
RAB40A-201ENST00000304236 CDC42BPGQ6DT37 1551 aa18.45■□□□□ 0.54
RAB40A-201ENST00000304236 ANKRD36BQ8N2N9 1353 aa18.45■□□□□ 0.54
RAB40A-201ENST00000304236 NINLQ9Y2I6 1382 aa18.45■□□□□ 0.54
RAB40A-201ENST00000304236 CFAP53Q96M91 514 aa18.44■□□□□ 0.54
RAB40A-201ENST00000304236 NPHP3Q7Z494 1330 aa18.44■□□□□ 0.54
RAB40A-201ENST00000304236 KDM2BQ8NHM5 1336 aa18.44■□□□□ 0.54
RAB40A-201ENST00000304236 NCBP3Q53F19 620 aaKnown RBP18.44■□□□□ 0.54
RAB40A-201ENST00000304236 RUNDC1Q96C34 613 aa18.44■□□□□ 0.54
RAB40A-201ENST00000304236 YTHDC2Q9H6S0 1430 aaKnown RBP18.44■□□□□ 0.54
RAB40A-201ENST00000304236 TULP4Q9NRJ4 1543 aa18.44■□□□□ 0.54
RAB40A-201ENST00000304236 SIRT1Q96EB6 747 aa18.43■□□□□ 0.54
RAB40A-201ENST00000304236 ZBTB47Q9UFB7 747 aaPredicted RBP18.43■□□□□ 0.54
RAB40A-201ENST00000304236 ADAMTS2O95450 1211 aa18.42■□□□□ 0.54
RAB40A-201ENST00000304236 NGLY1Q96IV0 654 aa18.42■□□□□ 0.54
RAB40A-201ENST00000304236 SPINK5Q9NQ38 1064 aaPredicted RBP18.41■□□□□ 0.54
RAB40A-201ENST00000304236 NUTM2FA1L443 756 aa18.41■□□□□ 0.54
RAB40A-201ENST00000304236 WWC1Q8IX03 1113 aa18.41■□□□□ 0.54
RAB40A-201ENST00000304236 QTRT2Q9H974 415 aaKnown RBP18.41■□□□□ 0.54
RAB40A-201ENST00000304236 KNDC1Q76NI1 1749 aa18.4■□□□□ 0.54
RAB40A-201ENST00000304236 FOXO3O43524 673 aa18.4■□□□□ 0.54
RAB40A-201ENST00000304236 CDK12Q9NYV4 1490 aaPredicted RBP18.4■□□□□ 0.54
RAB40A-201ENST00000304236 RBM6P78332 1123 aaKnown RBP18.38■□□□□ 0.53
RAB40A-201ENST00000304236 PDE3AQ14432 1141 aa18.38■□□□□ 0.53
RAB40A-201ENST00000304236 CCDC27Q2M243 656 aa18.38■□□□□ 0.53
RAB40A-201ENST00000304236 WDR63Q8IWG1 891 aa18.38■□□□□ 0.53
RAB40A-201ENST00000304236 MTHFSP49914 203 aa18.37■□□□□ 0.53
RAB40A-201ENST00000304236 PAK3O75914 559 aaPredicted RBP18.37■□□□□ 0.53
RAB40A-201ENST00000304236 XPCQ01831 940 aaPredicted RBP18.37■□□□□ 0.53
RAB40A-201ENST00000304236 PXDNQ92626 1479 aa18.36■□□□□ 0.53
RAB40A-201ENST00000304236 ATAD2Q6PL18 1390 aa18.36■□□□□ 0.53
RAB40A-201ENST00000304236 TNNT2P45379 298 aaPredicted RBP18.35■□□□□ 0.53
RAB40A-201ENST00000304236 UPF1Q92900 1129 aaKnown RBP eCLIP18.35■□□□□ 0.53
RAB40A-201ENST00000304236 TCP11L2Q8N4U5 519 aa18.35■□□□□ 0.53
RAB40A-201ENST00000304236 CABP2Q9NPB3 220 aa18.35■□□□□ 0.53
RAB40A-201ENST00000304236 USP21Q9UK80 565 aa18.35■□□□□ 0.53
RAB40A-201ENST00000304236 BCAR3O75815 825 aa18.34■□□□□ 0.53
RAB40A-201ENST00000304236 PRAM1Q96QH2 718 aa18.34■□□□□ 0.53
RAB40A-201ENST00000304236 COL22A1Q8NFW1 1626 aaPredicted RBP18.34■□□□□ 0.53
RAB40A-201ENST00000304236 FNBP4Q8N3X1 1017 aaPredicted RBP18.33■□□□□ 0.53
RAB40A-201ENST00000304236 POGKQ9P215 609 aa18.33■□□□□ 0.53
RAB40A-201ENST00000304236 AAMPQ13685 434 aa18.33■□□□□ 0.52
RAB40A-201ENST00000304236 FMN2Q9NZ56 1722 aa18.33■□□□□ 0.52
RAB40A-201ENST00000304236 SAFB2Q14151 953 aaKnown RBP eCLIP18.32■□□□□ 0.52
RAB40A-201ENST00000304236 TERF2IPQ9NYB0 399 aa18.32■□□□□ 0.52
RAB40A-201ENST00000304236 TRPC5Q9UL62 973 aaPredicted RBP18.32■□□□□ 0.52
RAB40A-201ENST00000304236 SRPK2P78362 688 aaKnown RBP18.31■□□□□ 0.52
RAB40A-201ENST00000304236 NPM2Q86SE8 214 aaKnown RBP18.31■□□□□ 0.52
RAB40A-201ENST00000304236 KRT28Q7Z3Y7 464 aa18.31■□□□□ 0.52
RAB40A-201ENST00000304236 DDRGK1Q96HY6 314 aa18.31■□□□□ 0.52
RAB40A-201ENST00000304236 PHF8Q9UPP1 1060 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms