RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 NKTRP30414 1462 aaKnown RBP25.51■■□□□ 1.67
HOXC4-201ENST00000303406 PIK3R4Q99570 1358 aa25.51■■□□□ 1.67
HOXC4-201ENST00000303406 XRN1Q8IZH2 1706 aaKnown RBP25.5■■□□□ 1.67
HOXC4-201ENST00000303406 ZNF692Q9BU19 519 aaPredicted RBP25.5■■□□□ 1.67
HOXC4-201ENST00000303406 B4GALNT3Q6L9W6 998 aa25.49■■□□□ 1.67
HOXC4-201ENST00000303406 AATKQ6ZMQ8 1374 aa25.48■■□□□ 1.67
HOXC4-201ENST00000303406 WDR63Q8IWG1 891 aa25.47■■□□□ 1.67
HOXC4-201ENST00000303406 WWC1Q8IX03 1113 aa25.47■■□□□ 1.67
HOXC4-201ENST00000303406 TCP11L2Q8N4U5 519 aa25.46■■□□□ 1.67
HOXC4-201ENST00000303406 NRKQ7Z2Y5 1582 aa25.46■■□□□ 1.67
HOXC4-201ENST00000303406 PRR36Q9H6K5 1346 aa25.45■■□□□ 1.67
HOXC4-201ENST00000303406 PLEKHG3A1L390 1219 aa25.44■■□□□ 1.66
HOXC4-201ENST00000303406 CCDC136Q96JN2 1154 aa25.44■■□□□ 1.66
HOXC4-201ENST00000303406 U2AF1L5P0DN76 240 aaPredicted RBP25.43■■□□□ 1.66
HOXC4-201ENST00000303406 U2AF1Q01081 240 aaKnown RBP eCLIP25.43■■□□□ 1.66
HOXC4-201ENST00000303406 SLC26A8Q96RN1 970 aa25.43■■□□□ 1.66
HOXC4-201ENST00000303406 PNNQ9H307 717 aaKnown RBP25.43■■□□□ 1.66
HOXC4-201ENST00000303406 AMOTL2Q9Y2J4 779 aa25.43■■□□□ 1.66
HOXC4-201ENST00000303406 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.42■■□□□ 1.66
HOXC4-201ENST00000303406 CDK12Q9NYV4 1490 aaPredicted RBP25.41■■□□□ 1.66
HOXC4-201ENST00000303406 DIAPH1O60610 1272 aaKnown RBP25.41■■□□□ 1.66
HOXC4-201ENST00000303406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.41■■□□□ 1.66
HOXC4-201ENST00000303406 SPINK5Q9NQ38 1064 aaPredicted RBP25.4■■□□□ 1.66
HOXC4-201ENST00000303406 PLEKHF1Q96S99 279 aa25.39■■□□□ 1.66
HOXC4-201ENST00000303406 MAP2P11137 1827 aaKnown RBP25.39■■□□□ 1.65
HOXC4-201ENST00000303406 EXOC6Q8TAG9 804 aa25.38■■□□□ 1.65
HOXC4-201ENST00000303406 POLKQ9UBT6 870 aa25.38■■□□□ 1.65
HOXC4-201ENST00000303406 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
HOXC4-201ENST00000303406 SETD1BQ9UPS6 1966 aaKnown RBP25.37■■□□□ 1.65
HOXC4-201ENST00000303406 COG3Q96JB2 828 aa25.36■■□□□ 1.65
HOXC4-201ENST00000303406 USP6P35125 1406 aa25.35■■□□□ 1.65
HOXC4-201ENST00000303406 ANKARQ7Z5J8 1434 aa25.35■■□□□ 1.65
HOXC4-201ENST00000303406 PLPPR3Q6T4P5 718 aa25.35■■□□□ 1.65
HOXC4-201ENST00000303406 NME9Q86XW9 330 aa25.35■■□□□ 1.65
HOXC4-201ENST00000303406 DMRT2Q9Y5R5 561 aa25.35■■□□□ 1.65
HOXC4-201ENST00000303406 U2SURPO15042 1029 aaKnown RBP25.33■■□□□ 1.65
HOXC4-201ENST00000303406 SSH2Q76I76 1423 aa25.33■■□□□ 1.65
HOXC4-201ENST00000303406 NCKAP5LQ9HCH0 1330 aa25.33■■□□□ 1.64
HOXC4-201ENST00000303406 FCHSD2O94868 740 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 NALCNQ8IZF0 1738 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 OVOS2A0A0J9YW53 1432 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 OVOS2Q6IE36 1432 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 ACEP12821 1306 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 TTC21BQ7Z4L5 1316 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 MAPK8IP3Q9UPT6 1336 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 ANKLE2Q86XL3 938 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 CHD2O14647 1828 aaKnown RBP25.31■■□□□ 1.64
HOXC4-201ENST00000303406 PLIN1O60240 522 aa25.3■■□□□ 1.64
HOXC4-201ENST00000303406 MYH16Q9H6N6 1097 aa25.3■■□□□ 1.64
HOXC4-201ENST00000303406 RRP7AQ9Y3A4 280 aaKnown RBP25.3■■□□□ 1.64
HOXC4-201ENST00000303406 LRRC7Q96NW7 1537 aa25.3■■□□□ 1.64
HOXC4-201ENST00000303406 IL16Q14005 1332 aa25.29■■□□□ 1.64
HOXC4-201ENST00000303406 FMN2Q9NZ56 1722 aa25.29■■□□□ 1.64
HOXC4-201ENST00000303406 TMPOP42166 694 aaKnown RBP25.29■■□□□ 1.64
HOXC4-201ENST00000303406 CRBNQ96SW2 442 aa25.29■■□□□ 1.64
HOXC4-201ENST00000303406 TTC21AQ8NDW8 1320 aa25.29■■□□□ 1.64
HOXC4-201ENST00000303406 NEUROD2Q15784 382 aa25.27■■□□□ 1.64
HOXC4-201ENST00000303406 CT47B1P0C2W7 299 aaPredicted RBP25.27■■□□□ 1.64
HOXC4-201ENST00000303406 USP31Q70CQ4 1352 aa25.27■■□□□ 1.64
HOXC4-201ENST00000303406 IL13P35225 146 aa25.25■■□□□ 1.63
HOXC4-201ENST00000303406 RSPH6AQ9H0K4 717 aa25.25■■□□□ 1.63
HOXC4-201ENST00000303406 RBM19Q9Y4C8 960 aaKnown RBP25.24■■□□□ 1.63
HOXC4-201ENST00000303406 KCNA6P17658 529 aa25.23■■□□□ 1.63
HOXC4-201ENST00000303406 ZRANB1Q9UGI0 708 aa25.23■■□□□ 1.63
HOXC4-201ENST00000303406 EMILIN1Q9Y6C2 1016 aa25.23■■□□□ 1.63
HOXC4-201ENST00000303406 TRIM35Q9UPQ4 493 aa25.22■■□□□ 1.63
HOXC4-201ENST00000303406 USP54Q70EL1 1684 aa25.22■■□□□ 1.63
HOXC4-201ENST00000303406 NEFMP07197 916 aa25.22■■□□□ 1.63
HOXC4-201ENST00000303406 PDE3AQ14432 1141 aa25.22■■□□□ 1.63
HOXC4-201ENST00000303406 C20orf194Q5TEA3 1177 aa25.21■■□□□ 1.63
HOXC4-201ENST00000303406 RGPD8O14715 1765 aaPredicted RBP25.2■■□□□ 1.62
HOXC4-201ENST00000303406 PPM1GO15355 546 aaPredicted RBP25.18■■□□□ 1.62
HOXC4-201ENST00000303406 NPHP4O75161 1426 aaPredicted RBP25.18■■□□□ 1.62
HOXC4-201ENST00000303406 BCAR3O75815 825 aa25.17■■□□□ 1.62
HOXC4-201ENST00000303406 FBLN1P23142 703 aa25.17■■□□□ 1.62
HOXC4-201ENST00000303406 RARSP54136 660 aaKnown RBP25.17■■□□□ 1.62
HOXC4-201ENST00000303406 RIPK4P57078 832 aa25.17■■□□□ 1.62
HOXC4-201ENST00000303406 PRKAR2BP31323 418 aa25.17■■□□□ 1.62
HOXC4-201ENST00000303406 NWD1Q149M9 1564 aa25.15■■□□□ 1.62
HOXC4-201ENST00000303406 NFE2L2Q16236 605 aa25.15■■□□□ 1.62
HOXC4-201ENST00000303406 FANCIQ9NVI1 1328 aa25.14■■□□□ 1.62
HOXC4-201ENST00000303406 NUTM2FA1L443 756 aa25.13■■□□□ 1.61
HOXC4-201ENST00000303406 AAMPQ13685 434 aa25.13■■□□□ 1.61
HOXC4-201ENST00000303406 RRS1Q15050 365 aaKnown RBP25.13■■□□□ 1.61
HOXC4-201ENST00000303406 NGDNQ8NEJ9 315 aaKnown RBP25.13■■□□□ 1.61
HOXC4-201ENST00000303406 PIK3C2AO00443 1686 aa25.13■■□□□ 1.61
HOXC4-201ENST00000303406 ADGRL3Q9HAR2 1447 aa25.13■■□□□ 1.61
HOXC4-201ENST00000303406 RGPD1P0DJD0 1748 aa25.13■■□□□ 1.61
HOXC4-201ENST00000303406 PEAK1Q9H792 1746 aa25.13■■□□□ 1.61
HOXC4-201ENST00000303406 CALD1Q05682 793 aaKnown RBP25.12■■□□□ 1.61
HOXC4-201ENST00000303406 KDM2BQ8NHM5 1336 aa25.1■■□□□ 1.61
HOXC4-201ENST00000303406 TCERG1O14776 1098 aaKnown RBP25.1■■□□□ 1.61
HOXC4-201ENST00000303406 LMOD3Q0VAK6 560 aa25.1■■□□□ 1.61
HOXC4-201ENST00000303406 PMFBP1Q8TBY8 1022 aa25.1■■□□□ 1.61
HOXC4-201ENST00000303406 KIF24Q5T7B8 1368 aa25.1■■□□□ 1.61
HOXC4-201ENST00000303406 CENPQQ7L2Z9 268 aaPredicted RBP25.09■■□□□ 1.61
HOXC4-201ENST00000303406 SBNO1A3KN83 1393 aa25.07■■□□□ 1.6
HOXC4-201ENST00000303406 HMOX1P09601 288 aa25.07■■□□□ 1.6
HOXC4-201ENST00000303406 CANXP27824 592 aaKnown RBP25.07■■□□□ 1.6
HOXC4-201ENST00000303406 EIF4A2Q14240 407 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms