RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 RCAN3Q9UKA8 241 aa19.09■□□□□ 0.65
SHCBP1-201ENST00000303383 CDC42BPGQ6DT37 1551 aa19.08■□□□□ 0.65
SHCBP1-201ENST00000303383 KIF20BQ96Q89 1820 aa19.08■□□□□ 0.65
SHCBP1-201ENST00000303383 PMFBP1Q8TBY8 1022 aa19.08■□□□□ 0.64
SHCBP1-201ENST00000303383 ADGRB2O60241 1585 aa19.08■□□□□ 0.64
SHCBP1-201ENST00000303383 ERICH6BQ5W0A0 696 aa19.08■□□□□ 0.64
SHCBP1-201ENST00000303383 DIAPH1O60610 1272 aaKnown RBP19.07■□□□□ 0.64
SHCBP1-201ENST00000303383 ANKRD26Q9UPS8 1709 aa19.06■□□□□ 0.64
SHCBP1-201ENST00000303383 PLEKHG3A1L390 1219 aa19.06■□□□□ 0.64
SHCBP1-201ENST00000303383 ITSN1Q15811 1721 aa19.05■□□□□ 0.64
SHCBP1-201ENST00000303383 NPHP4O75161 1426 aaPredicted RBP19.05■□□□□ 0.64
SHCBP1-201ENST00000303383 NEFMP07197 916 aa19.04■□□□□ 0.64
SHCBP1-201ENST00000303383 MAPK8IP3Q9UPT6 1336 aa19.04■□□□□ 0.64
SHCBP1-201ENST00000303383 ZRANB1Q9UGI0 708 aa19.04■□□□□ 0.64
SHCBP1-201ENST00000303383 TCP11L2Q8N4U5 519 aa19.04■□□□□ 0.64
SHCBP1-201ENST00000303383 RRP7AQ9Y3A4 280 aaKnown RBP19.04■□□□□ 0.64
SHCBP1-201ENST00000303383 TTC21BQ7Z4L5 1316 aa19.03■□□□□ 0.64
SHCBP1-201ENST00000303383 FBLN1P23142 703 aa19.03■□□□□ 0.64
SHCBP1-201ENST00000303383 PNNQ9H307 717 aaKnown RBP19.03■□□□□ 0.64
SHCBP1-201ENST00000303383 XRN1Q8IZH2 1706 aaKnown RBP19.02■□□□□ 0.64
SHCBP1-201ENST00000303383 RBM33Q96EV2 1170 aaKnown RBP19.02■□□□□ 0.64
SHCBP1-201ENST00000303383 POLKQ9UBT6 870 aa19.02■□□□□ 0.63
SHCBP1-201ENST00000303383 PPP4R2Q9NY27 417 aa19.01■□□□□ 0.63
SHCBP1-201ENST00000303383 SHPRHQ149N8 1683 aa19.01■□□□□ 0.63
SHCBP1-201ENST00000303383 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
SHCBP1-201ENST00000303383 E9PSI1 815 aa18.99■□□□□ 0.63
SHCBP1-201ENST00000303383 SOX12O15370 315 aa18.99■□□□□ 0.63
SHCBP1-201ENST00000303383 MON2Q7Z3U7 1717 aa18.99■□□□□ 0.63
SHCBP1-201ENST00000303383 USP6P35125 1406 aa18.99■□□□□ 0.63
SHCBP1-201ENST00000303383 ZNF521Q96K83 1311 aa18.98■□□□□ 0.63
SHCBP1-201ENST00000303383 RRP1P56182 461 aaKnown RBP18.98■□□□□ 0.63
SHCBP1-201ENST00000303383 AKAP12Q02952 1782 aa18.98■□□□□ 0.63
SHCBP1-201ENST00000303383 RRS1Q15050 365 aaKnown RBP18.98■□□□□ 0.63
SHCBP1-201ENST00000303383 SLFN5Q08AF3 891 aa18.98■□□□□ 0.63
SHCBP1-201ENST00000303383 WWC1Q8IX03 1113 aa18.97■□□□□ 0.63
SHCBP1-201ENST00000303383 DUSP27Q5VZP5 1158 aa18.97■□□□□ 0.63
SHCBP1-201ENST00000303383 TTC21AQ8NDW8 1320 aa18.96■□□□□ 0.63
SHCBP1-201ENST00000303383 NKTRP30414 1462 aaKnown RBP18.96■□□□□ 0.63
SHCBP1-201ENST00000303383 PAK3O75914 559 aaPredicted RBP18.96■□□□□ 0.63
SHCBP1-201ENST00000303383 ANKARQ7Z5J8 1434 aa18.96■□□□□ 0.63
SHCBP1-201ENST00000303383 CHD2O14647 1828 aaKnown RBP18.96■□□□□ 0.63
SHCBP1-201ENST00000303383 RNF123Q5XPI4 1314 aa18.96■□□□□ 0.63
SHCBP1-201ENST00000303383 PROSER2Q86WR7 435 aaPredicted RBP18.96■□□□□ 0.63
SHCBP1-201ENST00000303383 AATKQ6ZMQ8 1374 aa18.95■□□□□ 0.62
SHCBP1-201ENST00000303383 TOPAZ1Q8N9V7 1692 aa18.95■□□□□ 0.62
SHCBP1-201ENST00000303383 MAP2P11137 1827 aaKnown RBP18.95■□□□□ 0.62
SHCBP1-201ENST00000303383 PNPLA6Q8IY17 1366 aa18.94■□□□□ 0.62
SHCBP1-201ENST00000303383 PHF8Q9UPP1 1060 aa18.93■□□□□ 0.62
SHCBP1-201ENST00000303383 ESCO1Q5FWF5 840 aa18.93■□□□□ 0.62
SHCBP1-201ENST00000303383 COL3A1P02461 1466 aaPredicted RBP18.92■□□□□ 0.62
SHCBP1-201ENST00000303383 FCHSD2O94868 740 aa18.92■□□□□ 0.62
SHCBP1-201ENST00000303383 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.92■□□□□ 0.62
SHCBP1-201ENST00000303383 NLRP6P59044 892 aa18.92■□□□□ 0.62
SHCBP1-201ENST00000303383 HMOX1P09601 288 aa18.91■□□□□ 0.62
SHCBP1-201ENST00000303383 B4GALNT3Q6L9W6 998 aa18.91■□□□□ 0.62
SHCBP1-201ENST00000303383 RGPD8O14715 1765 aaPredicted RBP18.91■□□□□ 0.62
SHCBP1-201ENST00000303383 WDR63Q8IWG1 891 aa18.91■□□□□ 0.62
SHCBP1-201ENST00000303383 PRKAR2BP31323 418 aa18.9■□□□□ 0.62
SHCBP1-201ENST00000303383 SPINK5Q9NQ38 1064 aaPredicted RBP18.9■□□□□ 0.62
SHCBP1-201ENST00000303383 ADGRL3Q9HAR2 1447 aa18.9■□□□□ 0.62
SHCBP1-201ENST00000303383 HSPA2P54652 639 aa18.9■□□□□ 0.62
SHCBP1-201ENST00000303383 CCDC136Q96JN2 1154 aa18.9■□□□□ 0.62
SHCBP1-201ENST00000303383 TMPOP42166 694 aaKnown RBP18.9■□□□□ 0.62
SHCBP1-201ENST00000303383 CCDC27Q2M243 656 aa18.9■□□□□ 0.62
SHCBP1-201ENST00000303383 ABTB2Q8N961 1025 aa18.9■□□□□ 0.62
SHCBP1-201ENST00000303383 CDK12Q9NYV4 1490 aaPredicted RBP18.89■□□□□ 0.62
SHCBP1-201ENST00000303383 PSME1Q06323 249 aa18.89■□□□□ 0.61
SHCBP1-201ENST00000303383 RIPK4P57078 832 aa18.89■□□□□ 0.61
SHCBP1-201ENST00000303383 NUTM2GQ5VZR2 741 aa18.89■□□□□ 0.61
SHCBP1-201ENST00000303383 PLIN1O60240 522 aa18.88■□□□□ 0.61
SHCBP1-201ENST00000303383 MYH16Q9H6N6 1097 aa18.88■□□□□ 0.61
SHCBP1-201ENST00000303383 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
SHCBP1-201ENST00000303383 FMN2Q9NZ56 1722 aa18.88■□□□□ 0.61
SHCBP1-201ENST00000303383 PLEKHF1Q96S99 279 aa18.88■□□□□ 0.61
SHCBP1-201ENST00000303383 IQSEC2Q5JU85 1478 aa18.87■□□□□ 0.61
SHCBP1-201ENST00000303383 IL13P35225 146 aa18.87■□□□□ 0.61
SHCBP1-201ENST00000303383 AMPHP49418 695 aa18.87■□□□□ 0.61
SHCBP1-201ENST00000303383 OVOS2A0A0J9YW53 1432 aa18.87■□□□□ 0.61
SHCBP1-201ENST00000303383 OVOS2Q6IE36 1432 aa18.87■□□□□ 0.61
SHCBP1-201ENST00000303383 TRMT2AQ8IZ69 625 aaKnown RBP18.87■□□□□ 0.61
SHCBP1-201ENST00000303383 NALCNQ8IZF0 1738 aa18.86■□□□□ 0.61
SHCBP1-201ENST00000303383 NCBP3Q53F19 620 aaKnown RBP18.86■□□□□ 0.61
SHCBP1-201ENST00000303383 NRKQ7Z2Y5 1582 aa18.86■□□□□ 0.61
SHCBP1-201ENST00000303383 RSPH6AQ9H0K4 717 aa18.85■□□□□ 0.61
SHCBP1-201ENST00000303383 CANXP27824 592 aaKnown RBP18.85■□□□□ 0.61
SHCBP1-201ENST00000303383 SSH2Q76I76 1423 aa18.84■□□□□ 0.61
SHCBP1-201ENST00000303383 EXOC6Q8TAG9 804 aa18.83■□□□□ 0.61
SHCBP1-201ENST00000303383 ATF3P18847 181 aa18.83■□□□□ 0.6
SHCBP1-201ENST00000303383 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.6
SHCBP1-201ENST00000303383 LMOD2Q6P5Q4 547 aa18.83■□□□□ 0.6
SHCBP1-201ENST00000303383 C19orf44Q9H6X5 657 aa18.83■□□□□ 0.6
SHCBP1-201ENST00000303383 USP31Q70CQ4 1352 aa18.82■□□□□ 0.6
SHCBP1-201ENST00000303383 HSP90AB2PQ58FF8 381 aa18.82■□□□□ 0.6
SHCBP1-201ENST00000303383 EIF4A2Q14240 407 aaKnown RBP18.82■□□□□ 0.6
SHCBP1-201ENST00000303383 MAP3K19Q56UN5 1328 aa18.81■□□□□ 0.6
SHCBP1-201ENST00000303383 LRRC7Q96NW7 1537 aa18.8■□□□□ 0.6
SHCBP1-201ENST00000303383 FOXO3O43524 673 aa18.8■□□□□ 0.6
SHCBP1-201ENST00000303383 PLEKHG5O94827 1062 aa18.8■□□□□ 0.6
SHCBP1-201ENST00000303383 NFE2L2Q16236 605 aa18.8■□□□□ 0.6
SHCBP1-201ENST00000303383 SULT6B1Q6IMI4 303 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms