RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 CBX1P83916 185 aa16.9■□□□□ 0.3
HIPK3-201ENST00000303296 STIM1Q13586 685 aa16.9■□□□□ 0.3
HIPK3-201ENST00000303296 ZNF76P36508 570 aa16.89■□□□□ 0.29
HIPK3-201ENST00000303296 KIF3BO15066 747 aa16.89■□□□□ 0.29
HIPK3-201ENST00000303296 ZWINTO95229 277 aa16.89■□□□□ 0.29
HIPK3-201ENST00000303296 CCDC102AQ96A19 550 aa16.89■□□□□ 0.29
HIPK3-201ENST00000303296 KAT6BQ8WYB5 2073 aa16.89■□□□□ 0.29
HIPK3-201ENST00000303296 NUCB2P80303 420 aa16.88■□□□□ 0.29
HIPK3-201ENST00000303296 CCP110O43303 1012 aa16.88■□□□□ 0.29
HIPK3-201ENST00000303296 CAVIN1Q6NZI2 390 aaKnown RBP16.88■□□□□ 0.29
HIPK3-201ENST00000303296 FSD1Q9BTV5 496 aa16.88■□□□□ 0.29
HIPK3-201ENST00000303296 LNPKQ9C0E8 428 aa16.88■□□□□ 0.29
HIPK3-201ENST00000303296 STK3Q13188 491 aa16.88■□□□□ 0.29
HIPK3-201ENST00000303296 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
HIPK3-201ENST00000303296 DRC1Q96MC2 740 aa16.87■□□□□ 0.29
HIPK3-201ENST00000303296 TMCO5BA8MYB1 307 aa16.87■□□□□ 0.29
HIPK3-201ENST00000303296 TSPYL4Q9UJ04 414 aa16.87■□□□□ 0.29
HIPK3-201ENST00000303296 KIAA1328Q86T90 577 aa16.87■□□□□ 0.29
HIPK3-201ENST00000303296 NINLQ9Y2I6 1382 aa16.86■□□□□ 0.29
HIPK3-201ENST00000303296 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
HIPK3-201ENST00000303296 PSMA5P28066 241 aa16.86■□□□□ 0.29
HIPK3-201ENST00000303296 NUP133Q8WUM0 1156 aa16.86■□□□□ 0.29
HIPK3-201ENST00000303296 JAKMIP3Q5VZ66 844 aa16.86■□□□□ 0.29
HIPK3-201ENST00000303296 E9PSI1 815 aa16.86■□□□□ 0.29
HIPK3-201ENST00000303296 NUTM2GQ5VZR2 741 aa16.86■□□□□ 0.29
HIPK3-201ENST00000303296 SPATA24Q86W54 205 aa16.86■□□□□ 0.29
HIPK3-201ENST00000303296 KIF6Q6ZMV9 814 aa16.86■□□□□ 0.29
HIPK3-201ENST00000303296 CTNNBL1Q8WYA6 563 aaPredicted RBP16.86■□□□□ 0.29
HIPK3-201ENST00000303296 TTC39AQ5SRH9 613 aa16.85■□□□□ 0.29
HIPK3-201ENST00000303296 CNNM1Q9NRU3 951 aa16.85■□□□□ 0.29
HIPK3-201ENST00000303296 USP5P45974 858 aa16.85■□□□□ 0.29
HIPK3-201ENST00000303296 STK38Q15208 465 aa16.85■□□□□ 0.29
HIPK3-201ENST00000303296 CNTROBQ8N137 903 aa16.85■□□□□ 0.29
HIPK3-201ENST00000303296 TSHZ2Q9NRE2 1034 aa16.85■□□□□ 0.29
HIPK3-201ENST00000303296 CEP162Q5TB80 1403 aa16.84■□□□□ 0.29
HIPK3-201ENST00000303296 MRPS9P82933 396 aaKnown RBP16.84■□□□□ 0.29
HIPK3-201ENST00000303296 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
HIPK3-201ENST00000303296 WASHC2AQ641Q2 1341 aa16.83■□□□□ 0.29
HIPK3-201ENST00000303296 GOLGA3Q08378 1498 aa16.83■□□□□ 0.29
HIPK3-201ENST00000303296 MACROD2A1Z1Q3 448 aa16.83■□□□□ 0.29
HIPK3-201ENST00000303296 TSPY26PQ9H489 355 aa16.83■□□□□ 0.28
HIPK3-201ENST00000303296 SOGA3Q5TF21 947 aa16.83■□□□□ 0.28
HIPK3-201ENST00000303296 FIBPO43427 364 aa16.83■□□□□ 0.28
HIPK3-201ENST00000303296 EPB41L2O43491 1005 aaKnown RBP16.83■□□□□ 0.28
HIPK3-201ENST00000303296 GSTTP1A0A1W2PQM5 241 aa16.82■□□□□ 0.28
HIPK3-201ENST00000303296 TNNT1P13805 278 aa16.82■□□□□ 0.28
HIPK3-201ENST00000303296 EXOC6Q8TAG9 804 aa16.82■□□□□ 0.28
HIPK3-201ENST00000303296 RAPGEF4Q8WZA2 1011 aa16.82■□□□□ 0.28
HIPK3-201ENST00000303296 BMS1Q14692 1282 aaKnown RBP16.82■□□□□ 0.28
HIPK3-201ENST00000303296 MINK1Q8N4C8 1332 aaPredicted RBP16.82■□□□□ 0.28
HIPK3-201ENST00000303296 CCDC69A6NI79 296 aa16.81■□□□□ 0.28
HIPK3-201ENST00000303296 RIPK4P57078 832 aa16.81■□□□□ 0.28
HIPK3-201ENST00000303296 ROCK1Q13464 1354 aa16.81■□□□□ 0.28
HIPK3-201ENST00000303296 POTEJP0CG39 1038 aa16.81■□□□□ 0.28
HIPK3-201ENST00000303296 NUP155O75694 1391 aa16.81■□□□□ 0.28
HIPK3-201ENST00000303296 PABPN1LA6NDY0 278 aaKnown RBP16.81■□□□□ 0.28
HIPK3-201ENST00000303296 HMOX1P09601 288 aa16.81■□□□□ 0.28
HIPK3-201ENST00000303296 DNA2P51530 1060 aa16.81■□□□□ 0.28
HIPK3-201ENST00000303296 PODXL2Q9NZ53 605 aa16.81■□□□□ 0.28
HIPK3-201ENST00000303296 ARL1P40616 181 aaPredicted RBP16.81■□□□□ 0.28
HIPK3-201ENST00000303296 USP8P40818 1118 aa16.81■□□□□ 0.28
HIPK3-201ENST00000303296 PIP4K2AP48426 406 aaPredicted RBP16.81■□□□□ 0.28
HIPK3-201ENST00000303296 ZNF526Q8TF50 670 aaPredicted RBP16.81■□□□□ 0.28
HIPK3-201ENST00000303296 CFAP57Q96MR6 1250 aa16.8■□□□□ 0.28
HIPK3-201ENST00000303296 DDX19BQ9UMR2 479 aa16.8■□□□□ 0.28
HIPK3-201ENST00000303296 ZNF396Q96N95 335 aaPredicted RBP16.8■□□□□ 0.28
HIPK3-201ENST00000303296 TAF4BQ92750 862 aa16.8■□□□□ 0.28
HIPK3-201ENST00000303296 APBB1IPQ7Z5R6 666 aaPredicted RBP16.8■□□□□ 0.28
HIPK3-201ENST00000303296 TXLNBQ8N3L3 684 aa16.8■□□□□ 0.28
HIPK3-201ENST00000303296 ME1P48163 572 aa16.79■□□□□ 0.28
HIPK3-201ENST00000303296 UBTFL1P0CB47 393 aaPredicted RBP16.79■□□□□ 0.28
HIPK3-201ENST00000303296 ERLIN1O75477 346 aa16.79■□□□□ 0.28
HIPK3-201ENST00000303296 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
HIPK3-201ENST00000303296 LETM1O95202 739 aaPredicted RBP16.79■□□□□ 0.28
HIPK3-201ENST00000303296 PRPF40AO75400 957 aaKnown RBP16.79■□□□□ 0.28
HIPK3-201ENST00000303296 AEBP1Q8IUX7 1158 aa16.79■□□□□ 0.28
HIPK3-201ENST00000303296 GPATCH11Q8N954 259 aa16.79■□□□□ 0.28
HIPK3-201ENST00000303296 TIGD1Q96MW7 591 aa16.78■□□□□ 0.28
HIPK3-201ENST00000303296 LIG1P18858 919 aa16.78■□□□□ 0.28
HIPK3-201ENST00000303296 CCDC178Q5BJE1 867 aa16.78■□□□□ 0.28
HIPK3-201ENST00000303296 IQCEQ6IPM2 695 aa16.78■□□□□ 0.28
HIPK3-201ENST00000303296 MTERF4Q7Z6M4 381 aaKnown RBP16.78■□□□□ 0.28
HIPK3-201ENST00000303296 NLRP2Q9NX02 1062 aa16.78■□□□□ 0.28
HIPK3-201ENST00000303296 PANK3Q9H999 370 aa16.78■□□□□ 0.28
HIPK3-201ENST00000303296 MAP4K4O95819 1239 aaPredicted RBP16.77■□□□□ 0.28
HIPK3-201ENST00000303296 ATF3P18847 181 aa16.77■□□□□ 0.28
HIPK3-201ENST00000303296 EIF5P55010 431 aaKnown RBP16.77■□□□□ 0.28
HIPK3-201ENST00000303296 TMCO3Q6UWJ1 677 aa16.77■□□□□ 0.28
HIPK3-201ENST00000303296 C22orf23Q9BZE7 217 aa16.77■□□□□ 0.28
HIPK3-201ENST00000303296 DNAI2Q9GZS0 605 aa16.77■□□□□ 0.28
HIPK3-201ENST00000303296 CETN2P41208 172 aa16.77■□□□□ 0.27
HIPK3-201ENST00000303296 IPO4Q8TEX9 1081 aaKnown RBP16.77■□□□□ 0.27
HIPK3-201ENST00000303296 BMP2KQ9NSY1 1161 aaPredicted RBP16.77■□□□□ 0.27
HIPK3-201ENST00000303296 CCDC175P0C221 793 aa16.77■□□□□ 0.27
HIPK3-201ENST00000303296 RNF187Q5TA31 235 aaPredicted RBP16.77■□□□□ 0.27
HIPK3-201ENST00000303296 NLRP13Q86W25 1043 aa16.76■□□□□ 0.27
HIPK3-201ENST00000303296 HOOK3Q86VS8 718 aa16.76■□□□□ 0.27
HIPK3-201ENST00000303296 IFFO1Q0D2I5 559 aa16.76■□□□□ 0.27
HIPK3-201ENST00000303296 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
HIPK3-201ENST00000303296 SSX2IPQ9Y2D8 614 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms