RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 IL16Q14005 1332 aa30.86■■■□□ 2.53
FOXA3-201ENST00000302177 CD163L1Q9NR16 1453 aa30.86■■■□□ 2.53
FOXA3-201ENST00000302177 FYB1O15117 783 aa30.86■■■□□ 2.53
FOXA3-201ENST00000302177 SAFB2Q14151 953 aaKnown RBP eCLIP30.86■■■□□ 2.53
FOXA3-201ENST00000302177 PNNQ9H307 717 aaKnown RBP30.86■■■□□ 2.53
FOXA3-201ENST00000302177 PRAM1Q96QH2 718 aa30.85■■■□□ 2.53
FOXA3-201ENST00000302177 POGKQ9P215 609 aa30.85■■■□□ 2.53
FOXA3-201ENST00000302177 NLRP1Q9C000 1473 aa30.85■■■□□ 2.53
FOXA3-201ENST00000302177 RLBP1P12271 317 aa30.83■■■□□ 2.53
FOXA3-201ENST00000302177 RWDD1Q9H446 243 aaPredicted RBP30.83■■■□□ 2.53
FOXA3-201ENST00000302177 ALKQ9UM73 1620 aa30.83■■■□□ 2.53
FOXA3-201ENST00000302177 TMPOP42166 694 aaKnown RBP30.83■■■□□ 2.53
FOXA3-201ENST00000302177 HDGFL2Q7Z4V5 671 aaPredicted RBP30.83■■■□□ 2.53
FOXA3-201ENST00000302177 GGNBP2Q9H3C7 697 aa30.83■■■□□ 2.53
FOXA3-201ENST00000302177 PNPLA6Q8IY17 1366 aa30.82■■■□□ 2.52
FOXA3-201ENST00000302177 ZKSCAN2Q63HK3 967 aa30.82■■■□□ 2.52
FOXA3-201ENST00000302177 PCDHB15Q9Y5E8 787 aa30.81■■■□□ 2.52
FOXA3-201ENST00000302177 MVPQ14764 893 aaKnown RBP30.8■■■□□ 2.52
FOXA3-201ENST00000302177 MINK1Q8N4C8 1332 aaPredicted RBP30.8■■■□□ 2.52
FOXA3-201ENST00000302177 DLC1Q96QB1 1528 aa30.78■■■□□ 2.52
FOXA3-201ENST00000302177 U2SURPO15042 1029 aaKnown RBP30.77■■■□□ 2.52
FOXA3-201ENST00000302177 CEBPAP49715 358 aaPredicted RBP30.77■■■□□ 2.52
FOXA3-201ENST00000302177 ESF1Q9H501 851 aaKnown RBP30.77■■■□□ 2.52
FOXA3-201ENST00000302177 TRIM35Q9UPQ4 493 aa30.77■■■□□ 2.52
FOXA3-201ENST00000302177 RIMS1Q86UR5 1692 aaKnown RBP30.77■■■□□ 2.52
FOXA3-201ENST00000302177 USP19O94966 1318 aa30.76■■■□□ 2.52
FOXA3-201ENST00000302177 DZIP1LQ8IYY4 767 aaKnown RBP30.76■■■□□ 2.51
FOXA3-201ENST00000302177 CDK19Q9BWU1 502 aa30.76■■■□□ 2.51
FOXA3-201ENST00000302177 DIAPH1O60610 1272 aaKnown RBP30.75■■■□□ 2.51
FOXA3-201ENST00000302177 BCL2L13Q9BXK5 485 aa30.75■■■□□ 2.51
FOXA3-201ENST00000302177 FBXO31Q5XUX0 539 aaPredicted RBP30.74■■■□□ 2.51
FOXA3-201ENST00000302177 FER1L4A9Z1Z3 1794 aa30.74■■■□□ 2.51
FOXA3-201ENST00000302177 SLC4A3P48751 1232 aa30.74■■■□□ 2.51
FOXA3-201ENST00000302177 TNNQ9UQP3 1299 aa30.74■■■□□ 2.51
FOXA3-201ENST00000302177 NFKBIBQ15653 356 aa30.73■■■□□ 2.51
FOXA3-201ENST00000302177 CDC42BPGQ6DT37 1551 aa30.72■■■□□ 2.51
FOXA3-201ENST00000302177 EXOSC9Q06265 439 aaKnown RBP30.71■■■□□ 2.51
FOXA3-201ENST00000302177 FTSJ3Q8IY81 847 aaKnown RBP30.71■■■□□ 2.51
FOXA3-201ENST00000302177 PDZRN3Q9UPQ7 1066 aa30.71■■■□□ 2.51
FOXA3-201ENST00000302177 FCHSD2O94868 740 aa30.7■■■□□ 2.51
FOXA3-201ENST00000302177 STAG3Q9UJ98 1225 aa30.7■■■□□ 2.51
FOXA3-201ENST00000302177 ATP7BP35670 1465 aa30.7■■■□□ 2.5
FOXA3-201ENST00000302177 KIF20BQ96Q89 1820 aa30.7■■■□□ 2.5
FOXA3-201ENST00000302177 CABP1Q9NZU7 370 aa30.69■■■□□ 2.5
FOXA3-201ENST00000302177 TSR2Q969E8 191 aaKnown RBP30.68■■■□□ 2.5
FOXA3-201ENST00000302177 SMC4Q9NTJ3 1288 aa30.68■■■□□ 2.5
FOXA3-201ENST00000302177 RIPK4P57078 832 aa30.67■■■□□ 2.5
FOXA3-201ENST00000302177 DDX19BQ9UMR2 479 aa30.67■■■□□ 2.5
FOXA3-201ENST00000302177 SPATA31D1Q6ZQQ2 1576 aa30.66■■■□□ 2.5
FOXA3-201ENST00000302177 A2ML1A8K2U0 1454 aa30.66■■■□□ 2.5
FOXA3-201ENST00000302177 HDAC1Q13547 482 aaPredicted RBP30.66■■■□□ 2.5
FOXA3-201ENST00000302177 ATF7IPQ6VMQ6 1270 aa30.65■■■□□ 2.5
FOXA3-201ENST00000302177 BECN1Q14457 450 aa30.65■■■□□ 2.5
FOXA3-201ENST00000302177 SSH1Q8WYL5 1049 aa30.65■■■□□ 2.5
FOXA3-201ENST00000302177 ZNF428Q96B54 188 aa30.64■■■□□ 2.5
FOXA3-201ENST00000302177 UPF2Q9HAU5 1272 aaKnown RBP30.64■■■□□ 2.5
FOXA3-201ENST00000302177 SEC24BO95487 1268 aa30.63■■■□□ 2.49
FOXA3-201ENST00000302177 TRIM27P14373 513 aa30.63■■■□□ 2.49
FOXA3-201ENST00000302177 IPO8O15397 1037 aaKnown RBP30.63■■■□□ 2.49
FOXA3-201ENST00000302177 ALDH1L2Q3SY69 923 aa30.63■■■□□ 2.49
FOXA3-201ENST00000302177 KIF16BQ96L93 1317 aa30.61■■■□□ 2.49
FOXA3-201ENST00000302177 RIMS2Q9UQ26 1411 aa30.6■■■□□ 2.49
FOXA3-201ENST00000302177 BRPF1P55201 1214 aaPredicted RBP30.59■■■□□ 2.49
FOXA3-201ENST00000302177 SETD1AO15047 1707 aaKnown RBP30.59■■■□□ 2.49
FOXA3-201ENST00000302177 GSE1Q14687 1217 aa30.59■■■□□ 2.49
FOXA3-201ENST00000302177 FAM135BQ49AJ0 1406 aa30.58■■■□□ 2.49
FOXA3-201ENST00000302177 PPIP5K1Q6PFW1 1433 aa30.58■■■□□ 2.49
FOXA3-201ENST00000302177 POLKQ9UBT6 870 aa30.58■■■□□ 2.49
FOXA3-201ENST00000302177 RSPH6AQ9H0K4 717 aa30.57■■■□□ 2.48
FOXA3-201ENST00000302177 NOB1Q9ULX3 412 aaKnown RBP30.57■■■□□ 2.48
FOXA3-201ENST00000302177 TBC1D32Q96NH3 1257 aa30.56■■■□□ 2.48
FOXA3-201ENST00000302177 SENP3Q9H4L4 574 aaPredicted RBP30.56■■■□□ 2.48
FOXA3-201ENST00000302177 CPSF1Q10570 1443 aaKnown RBP30.55■■■□□ 2.48
FOXA3-201ENST00000302177 CALD1Q05682 793 aaKnown RBP30.55■■■□□ 2.48
FOXA3-201ENST00000302177 LRRC7Q96NW7 1537 aa30.54■■■□□ 2.48
FOXA3-201ENST00000302177 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.54■■■□□ 2.48
FOXA3-201ENST00000302177 SIRT1Q96EB6 747 aa30.54■■■□□ 2.48
FOXA3-201ENST00000302177 EDC4Q6P2E9 1401 aaKnown RBP30.54■■■□□ 2.48
FOXA3-201ENST00000302177 SMC5Q8IY18 1101 aa30.54■■■□□ 2.48
FOXA3-201ENST00000302177 ITPRIPQ8IWB1 547 aa30.53■■■□□ 2.48
FOXA3-201ENST00000302177 C3P01024 1663 aa30.53■■■□□ 2.48
FOXA3-201ENST00000302177 WAPLQ7Z5K2 1190 aa30.52■■■□□ 2.48
FOXA3-201ENST00000302177 ZBTB40Q9NUA8 1239 aa30.52■■■□□ 2.48
FOXA3-201ENST00000302177 AATKQ6ZMQ8 1374 aa30.51■■■□□ 2.47
FOXA3-201ENST00000302177 PRKAR2BP31323 418 aa30.5■■■□□ 2.47
FOXA3-201ENST00000302177 WASLO00401 505 aaPredicted RBP30.5■■■□□ 2.47
FOXA3-201ENST00000302177 NFE2L2Q16236 605 aa30.5■■■□□ 2.47
FOXA3-201ENST00000302177 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.49■■■□□ 2.47
FOXA3-201ENST00000302177 TMEM57Q8N5G2 664 aa30.48■■■□□ 2.47
FOXA3-201ENST00000302177 CHMP4BQ9H444 224 aaKnown RBP30.48■■■□□ 2.47
FOXA3-201ENST00000302177 CDK12Q9NYV4 1490 aaPredicted RBP30.47■■■□□ 2.47
FOXA3-201ENST00000302177 ARHGAP45Q92619 1136 aa30.46■■■□□ 2.47
FOXA3-201ENST00000302177 HDGFP51858 240 aaKnown RBP30.45■■■□□ 2.47
FOXA3-201ENST00000302177 NRXN3Q9Y4C0 1643 aa30.45■■■□□ 2.46
FOXA3-201ENST00000302177 FRAT2O75474 233 aaPredicted RBP30.45■■■□□ 2.46
FOXA3-201ENST00000302177 MAP2P11137 1827 aaKnown RBP30.44■■■□□ 2.46
FOXA3-201ENST00000302177 IL13P35225 146 aa30.44■■■□□ 2.46
FOXA3-201ENST00000302177 TECPR2O15040 1411 aa30.43■■■□□ 2.46
FOXA3-201ENST00000302177 GNAI1P63096 354 aa30.43■■■□□ 2.46
FOXA3-201ENST00000302177 IFT57Q9NWB7 429 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms