RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 ATAD2Q6PL18 1390 aa25.65■■□□□ 1.7
SPSB3-201ENST00000301717 TMC1Q8TDI8 760 aa25.63■■□□□ 1.69
SPSB3-201ENST00000301717 ABCA3Q99758 1704 aa25.63■■□□□ 1.69
SPSB3-201ENST00000301717 USP6P35125 1406 aa25.63■■□□□ 1.69
SPSB3-201ENST00000301717 ZNF772Q68DY9 489 aaPredicted RBP25.62■■□□□ 1.69
SPSB3-201ENST00000301717 SLC12A5Q9H2X9 1139 aa25.61■■□□□ 1.69
SPSB3-201ENST00000301717 ABTB2Q8N961 1025 aa25.6■■□□□ 1.69
SPSB3-201ENST00000301717 USP21Q9UK80 565 aa25.58■■□□□ 1.69
SPSB3-201ENST00000301717 SSH2Q76I76 1423 aa25.58■■□□□ 1.69
SPSB3-201ENST00000301717 CD163L1Q9NR16 1453 aa25.58■■□□□ 1.68
SPSB3-201ENST00000301717 FNBP4Q8N3X1 1017 aaPredicted RBP25.57■■□□□ 1.68
SPSB3-201ENST00000301717 CPSF1Q10570 1443 aaKnown RBP25.57■■□□□ 1.68
SPSB3-201ENST00000301717 TMF1P82094 1093 aa25.56■■□□□ 1.68
SPSB3-201ENST00000301717 HSPA5P11021 654 aaKnown RBP25.55■■□□□ 1.68
SPSB3-201ENST00000301717 KTN1Q86UP2 1357 aaKnown RBP25.55■■□□□ 1.68
SPSB3-201ENST00000301717 QTRT2Q9H974 415 aaKnown RBP25.55■■□□□ 1.68
SPSB3-201ENST00000301717 MARF1Q9Y4F3 1742 aaKnown RBP25.55■■□□□ 1.68
SPSB3-201ENST00000301717 CRYBG1Q9Y4K1 1723 aa25.55■■□□□ 1.68
SPSB3-201ENST00000301717 BCL9LQ86UU0 1499 aa25.55■■□□□ 1.68
SPSB3-201ENST00000301717 TTC21BQ7Z4L5 1316 aa25.54■■□□□ 1.68
SPSB3-201ENST00000301717 FAM83GA6ND36 823 aa25.54■■□□□ 1.68
SPSB3-201ENST00000301717 AKAP12Q02952 1782 aa25.53■■□□□ 1.68
SPSB3-201ENST00000301717 ZC3H6P61129 1189 aaKnown RBP25.52■■□□□ 1.68
SPSB3-201ENST00000301717 ZNF692Q9BU19 519 aaPredicted RBP25.52■■□□□ 1.68
SPSB3-201ENST00000301717 SLIT2O94813 1529 aa25.52■■□□□ 1.68
SPSB3-201ENST00000301717 A0A1W2PP64 1363 aa25.51■■□□□ 1.67
SPSB3-201ENST00000301717 PHRF1Q9P1Y6 1649 aaKnown RBP25.51■■□□□ 1.67
SPSB3-201ENST00000301717 EIF4G2P78344 907 aaKnown RBP eCLIP25.51■■□□□ 1.67
SPSB3-201ENST00000301717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.51■■□□□ 1.67
SPSB3-201ENST00000301717 PUS7Q96PZ0 661 aaKnown RBP25.51■■□□□ 1.67
SPSB3-201ENST00000301717 NRKQ7Z2Y5 1582 aa25.5■■□□□ 1.67
SPSB3-201ENST00000301717 RXRBP28702 533 aa25.5■■□□□ 1.67
SPSB3-201ENST00000301717 NLRP6P59044 892 aa25.5■■□□□ 1.67
SPSB3-201ENST00000301717 ZRANB1Q9UGI0 708 aa25.5■■□□□ 1.67
SPSB3-201ENST00000301717 PIK3C2AO00443 1686 aa25.5■■□□□ 1.67
SPSB3-201ENST00000301717 BRD4O60885 1362 aaPredicted RBP25.5■■□□□ 1.67
SPSB3-201ENST00000301717 USP19O94966 1318 aa25.49■■□□□ 1.67
SPSB3-201ENST00000301717 CHRNA2Q15822 529 aa25.49■■□□□ 1.67
SPSB3-201ENST00000301717 KIAA0232Q92628 1395 aa25.49■■□□□ 1.67
SPSB3-201ENST00000301717 HDGFL2Q7Z4V5 671 aaPredicted RBP25.48■■□□□ 1.67
SPSB3-201ENST00000301717 NLRP13Q86W25 1043 aa25.48■■□□□ 1.67
SPSB3-201ENST00000301717 MON2Q7Z3U7 1717 aa25.47■■□□□ 1.67
SPSB3-201ENST00000301717 ATRNO75882 1429 aa25.47■■□□□ 1.67
SPSB3-201ENST00000301717 SLC24A1O60721 1099 aa25.46■■□□□ 1.67
SPSB3-201ENST00000301717 UNC5CLQ8IV45 518 aa25.46■■□□□ 1.67
SPSB3-201ENST00000301717 PRDM11Q9NQV5 511 aa25.46■■□□□ 1.67
SPSB3-201ENST00000301717 TRPC5Q9UL62 973 aaPredicted RBP25.46■■□□□ 1.67
SPSB3-201ENST00000301717 PLCH1Q4KWH8 1693 aa25.46■■□□□ 1.67
SPSB3-201ENST00000301717 GCP02774 474 aa25.46■■□□□ 1.67
SPSB3-201ENST00000301717 NME9Q86XW9 330 aa25.46■■□□□ 1.67
SPSB3-201ENST00000301717 POLR3GLQ9BT43 218 aa25.46■■□□□ 1.67
SPSB3-201ENST00000301717 BTG4Q9NY30 223 aa25.46■■□□□ 1.67
SPSB3-201ENST00000301717 SOCS7O14512 581 aa25.45■■□□□ 1.66
SPSB3-201ENST00000301717 SOX12O15370 315 aa25.45■■□□□ 1.66
SPSB3-201ENST00000301717 TERF2IPQ9NYB0 399 aa25.45■■□□□ 1.66
SPSB3-201ENST00000301717 RBM6P78332 1123 aaKnown RBP25.44■■□□□ 1.66
SPSB3-201ENST00000301717 TTC21AQ8NDW8 1320 aa25.43■■□□□ 1.66
SPSB3-201ENST00000301717 ZBTB7CA1YPR0 619 aa25.43■■□□□ 1.66
SPSB3-201ENST00000301717 NINLQ9Y2I6 1382 aa25.41■■□□□ 1.66
SPSB3-201ENST00000301717 SLIT3O75094 1523 aa25.41■■□□□ 1.66
SPSB3-201ENST00000301717 RGS12O14924 1447 aa25.41■■□□□ 1.66
SPSB3-201ENST00000301717 EDC4Q6P2E9 1401 aaKnown RBP25.41■■□□□ 1.66
SPSB3-201ENST00000301717 C11orf95C9JLR9 678 aaPredicted RBP25.4■■□□□ 1.66
SPSB3-201ENST00000301717 COL14A1Q05707 1796 aaKnown RBP25.4■■□□□ 1.66
SPSB3-201ENST00000301717 ANKRD36BQ8N2N9 1353 aa25.4■■□□□ 1.66
SPSB3-201ENST00000301717 CDCA8Q53HL2 280 aa25.39■■□□□ 1.66
SPSB3-201ENST00000301717 GJD4Q96KN9 370 aaPredicted RBP25.38■■□□□ 1.65
SPSB3-201ENST00000301717 CCDC9Q9Y3X0 531 aaKnown RBP25.38■■□□□ 1.65
SPSB3-201ENST00000301717 MYOM1P52179 1685 aa25.38■■□□□ 1.65
SPSB3-201ENST00000301717 NRAPQ86VF7 1730 aa25.38■■□□□ 1.65
SPSB3-201ENST00000301717 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.38■■□□□ 1.65
SPSB3-201ENST00000301717 NWD2Q9ULI1 1742 aa25.37■■□□□ 1.65
SPSB3-201ENST00000301717 GLI3P10071 1580 aa25.37■■□□□ 1.65
SPSB3-201ENST00000301717 CPDO75976 1380 aa25.36■■□□□ 1.65
SPSB3-201ENST00000301717 VPS72Q15906 364 aa25.36■■□□□ 1.65
SPSB3-201ENST00000301717 STRN4Q9NRL3 753 aa25.35■■□□□ 1.65
SPSB3-201ENST00000301717 USP31Q70CQ4 1352 aa25.34■■□□□ 1.65
SPSB3-201ENST00000301717 CAMTA1Q9Y6Y1 1673 aa25.34■■□□□ 1.65
SPSB3-201ENST00000301717 CARD14Q9BXL6 1004 aa25.33■■□□□ 1.65
SPSB3-201ENST00000301717 CDK12Q9NYV4 1490 aaPredicted RBP25.33■■□□□ 1.65
SPSB3-201ENST00000301717 NFAT5O94916 1531 aa25.31■■□□□ 1.64
SPSB3-201ENST00000301717 OVOS2A0A0J9YW53 1432 aa25.31■■□□□ 1.64
SPSB3-201ENST00000301717 OVOS2Q6IE36 1432 aa25.31■■□□□ 1.64
SPSB3-201ENST00000301717 LMO7Q8WWI1 1683 aa25.3■■□□□ 1.64
SPSB3-201ENST00000301717 ARHGEF25Q86VW2 580 aa25.29■■□□□ 1.64
SPSB3-201ENST00000301717 KCNH5Q8NCM2 988 aa25.29■■□□□ 1.64
SPSB3-201ENST00000301717 FBLN1P23142 703 aa25.29■■□□□ 1.64
SPSB3-201ENST00000301717 GGNBP2Q9H3C7 697 aa25.29■■□□□ 1.64
SPSB3-201ENST00000301717 AXIN2Q9Y2T1 843 aa25.29■■□□□ 1.64
SPSB3-201ENST00000301717 NSD3Q9BZ95 1437 aa25.28■■□□□ 1.64
SPSB3-201ENST00000301717 LARP1Q6PKG0 1096 aaKnown RBP25.28■■□□□ 1.64
SPSB3-201ENST00000301717 SPATA31A5Q5VU36 1347 aa25.27■■□□□ 1.64
SPSB3-201ENST00000301717 SPATA31A7Q8IWB4 1347 aa25.27■■□□□ 1.64
SPSB3-201ENST00000301717 EVA1CP58658 441 aa25.27■■□□□ 1.64
SPSB3-201ENST00000301717 FAM98CQ17RN3 349 aaKnown RBP25.27■■□□□ 1.64
SPSB3-201ENST00000301717 AATKQ6ZMQ8 1374 aa25.26■■□□□ 1.63
SPSB3-201ENST00000301717 USP54Q70EL1 1684 aa25.26■■□□□ 1.63
SPSB3-201ENST00000301717 FYB1O15117 783 aa25.26■■□□□ 1.63
SPSB3-201ENST00000301717 USP35Q9P2H5 1018 aa25.25■■□□□ 1.63
SPSB3-201ENST00000301717 COL5A2P05997 1499 aaPredicted RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms