RNA–Protein interactions for RNA: ENST00000300215.7

EPB42-201, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 4,553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-201ENST00000300215 NEK4P51957 841 aa13.74□□□□□ -0.21
EPB42-201ENST00000300215 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
EPB42-201ENST00000300215 ERC2O15083 957 aa13.73□□□□□ -0.21
EPB42-201ENST00000300215 CDC45O75419 566 aa13.73□□□□□ -0.21
EPB42-201ENST00000300215 ATP2B1P20020 1258 aa13.73□□□□□ -0.21
EPB42-201ENST00000300215 CCDC27Q2M243 656 aa13.73□□□□□ -0.21
EPB42-201ENST00000300215 AMOTL1Q8IY63 956 aa13.73□□□□□ -0.21
EPB42-201ENST00000300215 TCEAL9Q9UHQ7 104 aa13.73□□□□□ -0.21
EPB42-201ENST00000300215 UBTFL1P0CB47 393 aaPredicted RBP13.73□□□□□ -0.21
EPB42-201ENST00000300215 HSP90AB4PQ58FF6 505 aa13.73□□□□□ -0.21
EPB42-201ENST00000300215 FMNL2Q96PY5 1086 aa13.73□□□□□ -0.21
EPB42-201ENST00000300215 SLC12A5Q9H2X9 1139 aa13.73□□□□□ -0.21
EPB42-201ENST00000300215 KDM4AO75164 1064 aa13.73□□□□□ -0.21
EPB42-201ENST00000300215 SAFBQ15424 915 aaKnown RBP eCLIP13.73□□□□□ -0.21
EPB42-201ENST00000300215 HOOK1Q9UJC3 728 aaKnown RBP13.73□□□□□ -0.21
EPB42-201ENST00000300215 RIC3Q7Z5B4 369 aa13.72□□□□□ -0.21
EPB42-201ENST00000300215 SURF6O75683 361 aaKnown RBP13.72□□□□□ -0.21
EPB42-201ENST00000300215 AKNAQ7Z591 1439 aa13.72□□□□□ -0.21
EPB42-201ENST00000300215 NAP1L1P55209 391 aaKnown RBP13.71□□□□□ -0.21
EPB42-201ENST00000300215 STAC3Q96MF2 364 aa13.71□□□□□ -0.21
EPB42-201ENST00000300215 ERICH2A1L162 156 aa13.71□□□□□ -0.21
EPB42-201ENST00000300215 TEX35Q5T0J7 233 aa13.71□□□□□ -0.21
EPB42-201ENST00000300215 MTMR7Q9Y216 660 aa13.71□□□□□ -0.21
EPB42-201ENST00000300215 RAPGEF4Q8WZA2 1011 aa13.71□□□□□ -0.21
EPB42-201ENST00000300215 CLASRPQ8N2M8 674 aaKnown RBP13.71□□□□□ -0.22
EPB42-201ENST00000300215 MPNDQ8N594 471 aa13.71□□□□□ -0.22
EPB42-201ENST00000300215 PNISRQ8TF01 805 aaKnown RBP13.7□□□□□ -0.22
EPB42-201ENST00000300215 C1orf115Q9H7X2 142 aa13.7□□□□□ -0.22
EPB42-201ENST00000300215 TRIM34Q9BYJ4 488 aa13.7□□□□□ -0.22
EPB42-201ENST00000300215 CCDC141Q6ZP82 1450 aa13.7□□□□□ -0.22
EPB42-201ENST00000300215 TRIM5Q9C035 493 aa13.7□□□□□ -0.22
EPB42-201ENST00000300215 NLRP2Q9NX02 1062 aa13.7□□□□□ -0.22
EPB42-201ENST00000300215 PLEKHH2Q8IVE3 1493 aa13.7□□□□□ -0.22
EPB42-201ENST00000300215 FYB1O15117 783 aa13.69□□□□□ -0.22
EPB42-201ENST00000300215 FIBPO43427 364 aa13.69□□□□□ -0.22
EPB42-201ENST00000300215 PDZRN3Q9UPQ7 1066 aa13.69□□□□□ -0.22
EPB42-201ENST00000300215 PRPF40AO75400 957 aaKnown RBP13.69□□□□□ -0.22
EPB42-201ENST00000300215 PPP2R1AP30153 589 aa13.69□□□□□ -0.22
EPB42-201ENST00000300215 TTLL5Q6EMB2 1281 aa13.69□□□□□ -0.22
EPB42-201ENST00000300215 FSD1Q9BTV5 496 aa13.69□□□□□ -0.22
EPB42-201ENST00000300215 EXOSC9Q06265 439 aaKnown RBP13.69□□□□□ -0.22
EPB42-201ENST00000300215 PDILTQ8N807 584 aa13.69□□□□□ -0.22
EPB42-201ENST00000300215 MAPKBP1O60336 1514 aa13.69□□□□□ -0.22
EPB42-201ENST00000300215 BRD4O60885 1362 aaPredicted RBP13.69□□□□□ -0.22
EPB42-201ENST00000300215 NLRP6P59044 892 aa13.68□□□□□ -0.22
EPB42-201ENST00000300215 GPATCH8Q9UKJ3 1502 aaKnown RBP13.68□□□□□ -0.22
EPB42-201ENST00000300215 OFD1O75665 1012 aa13.68□□□□□ -0.22
EPB42-201ENST00000300215 HSP90B2PQ58FF3 399 aa13.68□□□□□ -0.22
EPB42-201ENST00000300215 IL27Q8NEV9 243 aa13.68□□□□□ -0.22
EPB42-201ENST00000300215 ARGLU1Q9NWB6 273 aaPredicted RBP13.68□□□□□ -0.22
EPB42-201ENST00000300215 RUFY1Q96T51 708 aa13.67□□□□□ -0.22
EPB42-201ENST00000300215 CTDP1Q9Y5B0 961 aaPredicted RBP13.67□□□□□ -0.22
EPB42-201ENST00000300215 NUP153P49790 1475 aaKnown RBP13.67□□□□□ -0.22
EPB42-201ENST00000300215 TSR2Q969E8 191 aaKnown RBP13.67□□□□□ -0.22
EPB42-201ENST00000300215 ZNF428Q96B54 188 aa13.67□□□□□ -0.22
EPB42-201ENST00000300215 BCAR3O75815 825 aa13.66□□□□□ -0.22
EPB42-201ENST00000300215 PRKAR2BP31323 418 aa13.66□□□□□ -0.22
EPB42-201ENST00000300215 CCDC43Q96MW1 224 aaKnown RBP13.66□□□□□ -0.22
EPB42-201ENST00000300215 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
EPB42-201ENST00000300215 CEBPZQ03701 1054 aaKnown RBP13.66□□□□□ -0.22
EPB42-201ENST00000300215 PRAM1Q96QH2 718 aa13.65□□□□□ -0.22
EPB42-201ENST00000300215 FAM177BA6PVY3 158 aa13.65□□□□□ -0.22
EPB42-201ENST00000300215 KINO60870 393 aaKnown RBP13.65□□□□□ -0.22
EPB42-201ENST00000300215 MBD3O95983 291 aa13.65□□□□□ -0.22
EPB42-201ENST00000300215 GNAI3P08754 354 aa13.65□□□□□ -0.22
EPB42-201ENST00000300215 AAMPQ13685 434 aa13.65□□□□□ -0.22
EPB42-201ENST00000300215 CT47A1Q5JQC4 288 aaPredicted RBP13.65□□□□□ -0.22
EPB42-201ENST00000300215 ATP10BO94823 1461 aa13.65□□□□□ -0.22
EPB42-201ENST00000300215 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
EPB42-201ENST00000300215 CCDC39Q9UFE4 941 aa13.64□□□□□ -0.23
EPB42-201ENST00000300215 OLFM4Q6UX06 510 aa13.64□□□□□ -0.23
EPB42-201ENST00000300215 DNAJC2Q99543 621 aaKnown RBP13.64□□□□□ -0.23
EPB42-201ENST00000300215 NAT10Q9H0A0 1025 aaKnown RBP13.64□□□□□ -0.23
EPB42-201ENST00000300215 UGGT2Q9NYU1 1516 aa13.63□□□□□ -0.23
EPB42-201ENST00000300215 PSMA5P28066 241 aa13.63□□□□□ -0.23
EPB42-201ENST00000300215 TWISTNBQ3B726 338 aaPredicted RBP13.63□□□□□ -0.23
EPB42-201ENST00000300215 SPC24Q8NBT2 197 aa13.63□□□□□ -0.23
EPB42-201ENST00000300215 RPRD2Q5VT52 1461 aaKnown RBP13.63□□□□□ -0.23
EPB42-201ENST00000300215 KIF14Q15058 1648 aa13.62□□□□□ -0.23
EPB42-201ENST00000300215 ERBINQ96RT1 1412 aa13.62□□□□□ -0.23
EPB42-201ENST00000300215 SMC2O95347 1197 aa13.62□□□□□ -0.23
EPB42-201ENST00000300215 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
EPB42-201ENST00000300215 RBM10P98175 930 aaKnown RBP13.62□□□□□ -0.23
EPB42-201ENST00000300215 PDCP20941 246 aa13.62□□□□□ -0.23
EPB42-201ENST00000300215 ZFYVE27Q5T4F4 411 aa13.62□□□□□ -0.23
EPB42-201ENST00000300215 RBM33Q96EV2 1170 aaKnown RBP13.61□□□□□ -0.23
EPB42-201ENST00000300215 TXNDC2Q86VQ3 553 aa13.61□□□□□ -0.23
EPB42-201ENST00000300215 RABEP1Q15276 862 aa13.61□□□□□ -0.23
EPB42-201ENST00000300215 STK11IPQ8N1F8 1099 aa13.61□□□□□ -0.23
EPB42-201ENST00000300215 RRP12Q5JTH9 1297 aaKnown RBP13.6□□□□□ -0.23
EPB42-201ENST00000300215 BACH2Q9BYV9 841 aa13.6□□□□□ -0.23
EPB42-201ENST00000300215 ACBD3Q9H3P7 528 aa13.6□□□□□ -0.23
EPB42-201ENST00000300215 PDE3AQ14432 1141 aa13.6□□□□□ -0.23
EPB42-201ENST00000300215 CAGE1Q8TC20 777 aa13.6□□□□□ -0.23
EPB42-201ENST00000300215 AK7Q96M32 723 aa13.6□□□□□ -0.23
EPB42-201ENST00000300215 KIF21AQ7Z4S6 1674 aa13.6□□□□□ -0.23
EPB42-201ENST00000300215 SLC4A2P04920 1241 aa13.59□□□□□ -0.23
EPB42-201ENST00000300215 CCDC30Q5VVM6 783 aa13.59□□□□□ -0.23
EPB42-201ENST00000300215 NOB1Q9ULX3 412 aaKnown RBP13.59□□□□□ -0.23
EPB42-201ENST00000300215 XBP1P17861 261 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms