RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 U2AF1Q01081 240 aaKnown RBP eCLIP25.56■■□□□ 1.68
NFIL3-201ENST00000297689 FAM161AQ3B820 660 aa25.56■■□□□ 1.68
NFIL3-201ENST00000297689 GGNBP2Q9H3C7 697 aa25.56■■□□□ 1.68
NFIL3-201ENST00000297689 CLUAP1Q96AJ1 413 aa25.55■■□□□ 1.68
NFIL3-201ENST00000297689 PNPLA6Q8IY17 1366 aa25.55■■□□□ 1.68
NFIL3-201ENST00000297689 PANK1Q8TE04 598 aa25.54■■□□□ 1.68
NFIL3-201ENST00000297689 KNDC1Q76NI1 1749 aa25.54■■□□□ 1.68
NFIL3-201ENST00000297689 AAMPQ13685 434 aa25.54■■□□□ 1.68
NFIL3-201ENST00000297689 COG6Q9Y2V7 657 aa25.52■■□□□ 1.68
NFIL3-201ENST00000297689 ADAMTSL3P82987 1691 aa25.51■■□□□ 1.67
NFIL3-201ENST00000297689 MYH16Q9H6N6 1097 aa25.51■■□□□ 1.67
NFIL3-201ENST00000297689 HDGFP51858 240 aaKnown RBP25.51■■□□□ 1.67
NFIL3-201ENST00000297689 TECPR2O15040 1411 aa25.49■■□□□ 1.67
NFIL3-201ENST00000297689 CABP1Q9NZU7 370 aa25.49■■□□□ 1.67
NFIL3-201ENST00000297689 CT47B1P0C2W7 299 aaPredicted RBP25.48■■□□□ 1.67
NFIL3-201ENST00000297689 RLBP1P12271 317 aa25.48■■□□□ 1.67
NFIL3-201ENST00000297689 ADAMTS13Q76LX8 1427 aa25.48■■□□□ 1.67
NFIL3-201ENST00000297689 TMPOP42166 694 aaKnown RBP25.48■■□□□ 1.67
NFIL3-201ENST00000297689 NBR1Q14596 966 aa25.48■■□□□ 1.67
NFIL3-201ENST00000297689 TXNDC2Q86VQ3 553 aa25.48■■□□□ 1.67
NFIL3-201ENST00000297689 TRIM35Q9UPQ4 493 aa25.48■■□□□ 1.67
NFIL3-201ENST00000297689 KIF20BQ96Q89 1820 aa25.47■■□□□ 1.67
NFIL3-201ENST00000297689 CPS1P31327 1500 aa25.47■■□□□ 1.67
NFIL3-201ENST00000297689 HDGFL2Q7Z4V5 671 aaPredicted RBP25.47■■□□□ 1.67
NFIL3-201ENST00000297689 DDRGK1Q96HY6 314 aa25.47■■□□□ 1.67
NFIL3-201ENST00000297689 CANXP27824 592 aaKnown RBP25.46■■□□□ 1.67
NFIL3-201ENST00000297689 CDC42BPGQ6DT37 1551 aa25.46■■□□□ 1.67
NFIL3-201ENST00000297689 RIMS1Q86UR5 1692 aaKnown RBP25.46■■□□□ 1.67
NFIL3-201ENST00000297689 LTKP29376 864 aa25.46■■□□□ 1.67
NFIL3-201ENST00000297689 FRAT1Q92837 279 aaPredicted RBP25.46■■□□□ 1.67
NFIL3-201ENST00000297689 FAM135BQ49AJ0 1406 aa25.45■■□□□ 1.67
NFIL3-201ENST00000297689 ATP7BP35670 1465 aa25.45■■□□□ 1.67
NFIL3-201ENST00000297689 SIRT1Q96EB6 747 aa25.45■■□□□ 1.66
NFIL3-201ENST00000297689 RGS3P49796 1198 aa25.44■■□□□ 1.66
NFIL3-201ENST00000297689 TNNQ9UQP3 1299 aa25.44■■□□□ 1.66
NFIL3-201ENST00000297689 IL16Q14005 1332 aa25.44■■□□□ 1.66
NFIL3-201ENST00000297689 PLPPR3Q6T4P5 718 aa25.43■■□□□ 1.66
NFIL3-201ENST00000297689 PLEKHG1Q9ULL1 1385 aa25.42■■□□□ 1.66
NFIL3-201ENST00000297689 WASLO00401 505 aaPredicted RBP25.42■■□□□ 1.66
NFIL3-201ENST00000297689 VIRMAQ69YN4 1812 aaKnown RBP25.42■■□□□ 1.66
NFIL3-201ENST00000297689 U2SURPO15042 1029 aaKnown RBP25.41■■□□□ 1.66
NFIL3-201ENST00000297689 PCDHB15Q9Y5E8 787 aa25.41■■□□□ 1.66
NFIL3-201ENST00000297689 DIAPH1O60610 1272 aaKnown RBP25.4■■□□□ 1.66
NFIL3-201ENST00000297689 PMFBP1Q8TBY8 1022 aa25.4■■□□□ 1.66
NFIL3-201ENST00000297689 BCL2L13Q9BXK5 485 aa25.4■■□□□ 1.66
NFIL3-201ENST00000297689 MAPK8IP3Q9UPT6 1336 aa25.4■■□□□ 1.66
NFIL3-201ENST00000297689 ROBO2Q9HCK4 1378 aa25.39■■□□□ 1.65
NFIL3-201ENST00000297689 CPSF1Q10570 1443 aaKnown RBP25.39■■□□□ 1.65
NFIL3-201ENST00000297689 SLIT1O75093 1534 aa25.38■■□□□ 1.65
NFIL3-201ENST00000297689 DEKP35659 375 aaKnown RBP25.38■■□□□ 1.65
NFIL3-201ENST00000297689 ARHGAP23Q9P227 1491 aa25.38■■□□□ 1.65
NFIL3-201ENST00000297689 TSR2Q969E8 191 aaKnown RBP25.37■■□□□ 1.65
NFIL3-201ENST00000297689 POLKQ9UBT6 870 aa25.36■■□□□ 1.65
NFIL3-201ENST00000297689 PPIP5K1Q6PFW1 1433 aa25.36■■□□□ 1.65
NFIL3-201ENST00000297689 FCHSD2O94868 740 aa25.35■■□□□ 1.65
NFIL3-201ENST00000297689 EXOSC9Q06265 439 aaKnown RBP25.35■■□□□ 1.65
NFIL3-201ENST00000297689 MVPQ14764 893 aaKnown RBP25.35■■□□□ 1.65
NFIL3-201ENST00000297689 PNNQ9H307 717 aaKnown RBP25.35■■□□□ 1.65
NFIL3-201ENST00000297689 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.35■■□□□ 1.65
NFIL3-201ENST00000297689 ZKSCAN2Q63HK3 967 aa25.35■■□□□ 1.65
NFIL3-201ENST00000297689 PTPRUQ92729 1446 aa25.34■■□□□ 1.65
NFIL3-201ENST00000297689 USP19O94966 1318 aa25.34■■□□□ 1.65
NFIL3-201ENST00000297689 NUDT16Q96DE0 195 aaKnown RBP25.33■■□□□ 1.65
NFIL3-201ENST00000297689 LRRC7Q96NW7 1537 aa25.33■■□□□ 1.65
NFIL3-201ENST00000297689 NCKAP5LQ9HCH0 1330 aa25.33■■□□□ 1.65
NFIL3-201ENST00000297689 RIPK4P57078 832 aa25.33■■□□□ 1.65
NFIL3-201ENST00000297689 USP35Q9P2H5 1018 aa25.32■■□□□ 1.64
NFIL3-201ENST00000297689 EDC4Q6P2E9 1401 aaKnown RBP25.32■■□□□ 1.64
NFIL3-201ENST00000297689 PPM1GO15355 546 aaPredicted RBP25.32■■□□□ 1.64
NFIL3-201ENST00000297689 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.32■■□□□ 1.64
NFIL3-201ENST00000297689 RSPH6AQ9H0K4 717 aa25.32■■□□□ 1.64
NFIL3-201ENST00000297689 DZIP1LQ8IYY4 767 aaKnown RBP25.31■■□□□ 1.64
NFIL3-201ENST00000297689 SSH1Q8WYL5 1049 aa25.3■■□□□ 1.64
NFIL3-201ENST00000297689 SLC26A8Q96RN1 970 aa25.3■■□□□ 1.64
NFIL3-201ENST00000297689 PRR36Q9H6K5 1346 aa25.3■■□□□ 1.64
NFIL3-201ENST00000297689 MAP2P11137 1827 aaKnown RBP25.3■■□□□ 1.64
NFIL3-201ENST00000297689 EID1Q9Y6B2 187 aa25.3■■□□□ 1.64
NFIL3-201ENST00000297689 MON2Q7Z3U7 1717 aa25.3■■□□□ 1.64
NFIL3-201ENST00000297689 RTL5Q5HYW3 569 aaPredicted RBP25.29■■□□□ 1.64
NFIL3-201ENST00000297689 LAS1LQ9Y4W2 734 aaKnown RBP25.29■■□□□ 1.64
NFIL3-201ENST00000297689 AKAP12Q02952 1782 aa25.29■■□□□ 1.64
NFIL3-201ENST00000297689 SETD1BQ9UPS6 1966 aaKnown RBP25.28■■□□□ 1.64
NFIL3-201ENST00000297689 TRIM27P14373 513 aa25.28■■□□□ 1.64
NFIL3-201ENST00000297689 RWDD1Q9H446 243 aaPredicted RBP25.28■■□□□ 1.64
NFIL3-201ENST00000297689 AATKQ6ZMQ8 1374 aa25.27■■□□□ 1.64
NFIL3-201ENST00000297689 FBLN1P23142 703 aa25.27■■□□□ 1.64
NFIL3-201ENST00000297689 SMC4Q9NTJ3 1288 aa25.27■■□□□ 1.64
NFIL3-201ENST00000297689 CCDC61Q9Y6R9 512 aa25.27■■□□□ 1.64
NFIL3-201ENST00000297689 THEMISQ8N1K5 641 aaPredicted RBP25.26■■□□□ 1.63
NFIL3-201ENST00000297689 PDZRN3Q9UPQ7 1066 aa25.26■■□□□ 1.63
NFIL3-201ENST00000297689 CEP170BQ9Y4F5 1589 aaPredicted RBP25.26■■□□□ 1.63
NFIL3-201ENST00000297689 ITSN1Q15811 1721 aa25.25■■□□□ 1.63
NFIL3-201ENST00000297689 ATF7IPQ6VMQ6 1270 aa25.25■■□□□ 1.63
NFIL3-201ENST00000297689 CDK12Q9NYV4 1490 aaPredicted RBP25.24■■□□□ 1.63
NFIL3-201ENST00000297689 PRKAR2BP31323 418 aa25.24■■□□□ 1.63
NFIL3-201ENST00000297689 NME9Q86XW9 330 aa25.24■■□□□ 1.63
NFIL3-201ENST00000297689 TBX22Q9Y458 520 aa25.24■■□□□ 1.63
NFIL3-201ENST00000297689 TOPAZ1Q8N9V7 1692 aa25.23■■□□□ 1.63
NFIL3-201ENST00000297689 SEC24BO95487 1268 aa25.23■■□□□ 1.63
NFIL3-201ENST00000297689 IL13P35225 146 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms