RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 USP6P35125 1406 aa32.88■■■□□ 2.85
GBX1-201ENST00000297537 CPSF1Q10570 1443 aaKnown RBP32.88■■■□□ 2.85
GBX1-201ENST00000297537 SSH2Q76I76 1423 aa32.87■■■□□ 2.85
GBX1-201ENST00000297537 AFF2P51816 1311 aa32.87■■■□□ 2.85
GBX1-201ENST00000297537 TMF1P82094 1093 aa32.86■■■□□ 2.85
GBX1-201ENST00000297537 ZNF772Q68DY9 489 aaPredicted RBP32.86■■■□□ 2.85
GBX1-201ENST00000297537 FNBP4Q8N3X1 1017 aaPredicted RBP32.85■■■□□ 2.85
GBX1-201ENST00000297537 NGLY1Q96IV0 654 aa32.85■■■□□ 2.85
GBX1-201ENST00000297537 SLC12A5Q9H2X9 1139 aa32.84■■■□□ 2.85
GBX1-201ENST00000297537 CD163L1Q9NR16 1453 aa32.82■■■□□ 2.84
GBX1-201ENST00000297537 EIF4G2P78344 907 aaKnown RBP eCLIP32.81■■■□□ 2.84
GBX1-201ENST00000297537 ABTB2Q8N961 1025 aa32.81■■■□□ 2.84
GBX1-201ENST00000297537 ABCA3Q99758 1704 aa32.8■■■□□ 2.84
GBX1-201ENST00000297537 MARF1Q9Y4F3 1742 aaKnown RBP32.8■■■□□ 2.84
GBX1-201ENST00000297537 PLEKHG5O94827 1062 aa32.8■■■□□ 2.84
GBX1-201ENST00000297537 TMC1Q8TDI8 760 aa32.8■■■□□ 2.84
GBX1-201ENST00000297537 AKAP12Q02952 1782 aa32.79■■■□□ 2.84
GBX1-201ENST00000297537 HAP1P54257 671 aaPredicted RBP32.79■■■□□ 2.84
GBX1-201ENST00000297537 CRYBG1Q9Y4K1 1723 aa32.78■■■□□ 2.84
GBX1-201ENST00000297537 HSPA5P11021 654 aaKnown RBP32.77■■■□□ 2.84
GBX1-201ENST00000297537 NUTM2GQ5VZR2 741 aa32.77■■■□□ 2.84
GBX1-201ENST00000297537 NINLQ9Y2I6 1382 aa32.77■■■□□ 2.84
GBX1-201ENST00000297537 TTC21BQ7Z4L5 1316 aa32.77■■■□□ 2.84
GBX1-201ENST00000297537 KTN1Q86UP2 1357 aaKnown RBP32.76■■■□□ 2.83
GBX1-201ENST00000297537 CDCA8Q53HL2 280 aa32.75■■■□□ 2.83
GBX1-201ENST00000297537 USP21Q9UK80 565 aa32.74■■■□□ 2.83
GBX1-201ENST00000297537 USP19O94966 1318 aa32.74■■■□□ 2.83
GBX1-201ENST00000297537 BCL9LQ86UU0 1499 aa32.74■■■□□ 2.83
GBX1-201ENST00000297537 SLIT2O94813 1529 aa32.73■■■□□ 2.83
GBX1-201ENST00000297537 NLRP13Q86W25 1043 aa32.73■■■□□ 2.83
GBX1-201ENST00000297537 FAM83GA6ND36 823 aa32.72■■■□□ 2.83
GBX1-201ENST00000297537 HDGFL2Q7Z4V5 671 aaPredicted RBP32.72■■■□□ 2.83
GBX1-201ENST00000297537 QTRT2Q9H974 415 aaKnown RBP32.72■■■□□ 2.83
GBX1-201ENST00000297537 TERF2IPQ9NYB0 399 aa32.72■■■□□ 2.83
GBX1-201ENST00000297537 TTC21AQ8NDW8 1320 aa32.72■■■□□ 2.83
GBX1-201ENST00000297537 MON2Q7Z3U7 1717 aa32.71■■■□□ 2.83
GBX1-201ENST00000297537 A0A1W2PP64 1363 aa32.7■■■□□ 2.83
GBX1-201ENST00000297537 NRKQ7Z2Y5 1582 aa32.7■■■□□ 2.83
GBX1-201ENST00000297537 NLRP6P59044 892 aa32.69■■■□□ 2.82
GBX1-201ENST00000297537 PHRF1Q9P1Y6 1649 aaKnown RBP32.67■■■□□ 2.82
GBX1-201ENST00000297537 PIK3C2AO00443 1686 aa32.67■■■□□ 2.82
GBX1-201ENST00000297537 GCP02774 474 aa32.65■■■□□ 2.82
GBX1-201ENST00000297537 RXRBP28702 533 aa32.65■■■□□ 2.82
GBX1-201ENST00000297537 UNC5CLQ8IV45 518 aa32.65■■■□□ 2.82
GBX1-201ENST00000297537 TRPC5Q9UL62 973 aaPredicted RBP32.65■■■□□ 2.82
GBX1-201ENST00000297537 EDC4Q6P2E9 1401 aaKnown RBP32.65■■■□□ 2.82
GBX1-201ENST00000297537 ATRNO75882 1429 aa32.64■■■□□ 2.82
GBX1-201ENST00000297537 ANKRD36BQ8N2N9 1353 aa32.63■■■□□ 2.81
GBX1-201ENST00000297537 KIAA0232Q92628 1395 aa32.62■■■□□ 2.81
GBX1-201ENST00000297537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.62■■■□□ 2.81
GBX1-201ENST00000297537 ZC3H6P61129 1189 aaKnown RBP32.61■■■□□ 2.81
GBX1-201ENST00000297537 RBM6P78332 1123 aaKnown RBP32.61■■■□□ 2.81
GBX1-201ENST00000297537 SLIT3O75094 1523 aa32.61■■■□□ 2.81
GBX1-201ENST00000297537 CPDO75976 1380 aa32.6■■■□□ 2.81
GBX1-201ENST00000297537 USP31Q70CQ4 1352 aa32.6■■■□□ 2.81
GBX1-201ENST00000297537 PRDM11Q9NQV5 511 aa32.6■■■□□ 2.81
GBX1-201ENST00000297537 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.6■■■□□ 2.81
GBX1-201ENST00000297537 COL14A1Q05707 1796 aaKnown RBP32.59■■■□□ 2.81
GBX1-201ENST00000297537 NWD2Q9ULI1 1742 aa32.59■■■□□ 2.81
GBX1-201ENST00000297537 PLCH1Q4KWH8 1693 aa32.59■■■□□ 2.81
GBX1-201ENST00000297537 NME9Q86XW9 330 aa32.58■■■□□ 2.81
GBX1-201ENST00000297537 BTG4Q9NY30 223 aa32.57■■■□□ 2.8
GBX1-201ENST00000297537 ZRANB1Q9UGI0 708 aa32.57■■■□□ 2.8
GBX1-201ENST00000297537 C11orf95C9JLR9 678 aaPredicted RBP32.56■■■□□ 2.8
GBX1-201ENST00000297537 CDK12Q9NYV4 1490 aaPredicted RBP32.55■■■□□ 2.8
GBX1-201ENST00000297537 CHRNA2Q15822 529 aa32.55■■■□□ 2.8
GBX1-201ENST00000297537 MYOM1P52179 1685 aa32.54■■■□□ 2.8
GBX1-201ENST00000297537 SOCS7O14512 581 aa32.54■■■□□ 2.8
GBX1-201ENST00000297537 VPS72Q15906 364 aa32.54■■■□□ 2.8
GBX1-201ENST00000297537 GJD4Q96KN9 370 aaPredicted RBP32.54■■■□□ 2.8
GBX1-201ENST00000297537 KCNH5Q8NCM2 988 aa32.53■■■□□ 2.8
GBX1-201ENST00000297537 USP54Q70EL1 1684 aa32.53■■■□□ 2.8
GBX1-201ENST00000297537 CARD14Q9BXL6 1004 aa32.5■■■□□ 2.79
GBX1-201ENST00000297537 NRAPQ86VF7 1730 aa32.5■■■□□ 2.79
GBX1-201ENST00000297537 ARHGEF25Q86VW2 580 aa32.48■■■□□ 2.79
GBX1-201ENST00000297537 OVOS2A0A0J9YW53 1432 aa32.48■■■□□ 2.79
GBX1-201ENST00000297537 OVOS2Q6IE36 1432 aa32.48■■■□□ 2.79
GBX1-201ENST00000297537 NFAT5O94916 1531 aa32.46■■■□□ 2.79
GBX1-201ENST00000297537 LMO7Q8WWI1 1683 aa32.46■■■□□ 2.79
GBX1-201ENST00000297537 CAMTA1Q9Y6Y1 1673 aa32.46■■■□□ 2.79
GBX1-201ENST00000297537 AATKQ6ZMQ8 1374 aa32.45■■■□□ 2.79
GBX1-201ENST00000297537 RGS12O14924 1447 aa32.45■■■□□ 2.79
GBX1-201ENST00000297537 FYB1O15117 783 aa32.45■■■□□ 2.79
GBX1-201ENST00000297537 POLR3GLQ9BT43 218 aa32.45■■■□□ 2.79
GBX1-201ENST00000297537 GLI3P10071 1580 aa32.45■■■□□ 2.78
GBX1-201ENST00000297537 SOX12O15370 315 aa32.41■■■□□ 2.78
GBX1-201ENST00000297537 ONECUT3O60422 494 aaPredicted RBP32.41■■■□□ 2.78
GBX1-201ENST00000297537 COG3Q96JB2 828 aa32.4■■■□□ 2.78
GBX1-201ENST00000297537 KIF7Q2M1P5 1343 aa32.4■■■□□ 2.78
GBX1-201ENST00000297537 SPATA31A5Q5VU36 1347 aa32.4■■■□□ 2.78
GBX1-201ENST00000297537 SPATA31A7Q8IWB4 1347 aa32.4■■■□□ 2.78
GBX1-201ENST00000297537 COL18A1P39060 1754 aa32.4■■■□□ 2.78
GBX1-201ENST00000297537 AXIN2Q9Y2T1 843 aa32.39■■■□□ 2.78
GBX1-201ENST00000297537 CCDC9Q9Y3X0 531 aaKnown RBP32.39■■■□□ 2.78
GBX1-201ENST00000297537 NSD3Q9BZ95 1437 aa32.38■■■□□ 2.77
GBX1-201ENST00000297537 STRN4Q9NRL3 753 aa32.38■■■□□ 2.77
GBX1-201ENST00000297537 GGNBP2Q9H3C7 697 aa32.37■■■□□ 2.77
GBX1-201ENST00000297537 ZBTB7CA1YPR0 619 aa32.36■■■□□ 2.77
GBX1-201ENST00000297537 EVA1CP58658 441 aa32.36■■■□□ 2.77
GBX1-201ENST00000297537 COL5A2P05997 1499 aaPredicted RBP32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms