RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 SMARCA5O60264 1052 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF21-201ENST00000296861 HSP90AA2PQ14568 343 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF21-201ENST00000296861 MAST1Q9Y2H9 1570 aa16.54■□□□□ 0.24
TNFRSF21-201ENST00000296861 ZNF428Q96B54 188 aa16.54■□□□□ 0.24
TNFRSF21-201ENST00000296861 EMILIN1Q9Y6C2 1016 aa16.53■□□□□ 0.24
TNFRSF21-201ENST00000296861 MRE11P49959 708 aa16.53■□□□□ 0.24
TNFRSF21-201ENST00000296861 C16orf71Q8IYS4 520 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF21-201ENST00000296861 RNF214Q8ND24 703 aa16.53■□□□□ 0.24
TNFRSF21-201ENST00000296861 ANTXR1Q9H6X2 564 aa16.53■□□□□ 0.24
TNFRSF21-201ENST00000296861 MIS18AQ9NYP9 233 aa16.53■□□□□ 0.24
TNFRSF21-201ENST00000296861 FBXO31Q5XUX0 539 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF21-201ENST00000296861 CAVIN1Q6NZI2 390 aaKnown RBP16.53■□□□□ 0.24
TNFRSF21-201ENST00000296861 CHAMP1Q96JM3 812 aa16.53■□□□□ 0.24
TNFRSF21-201ENST00000296861 ZRANB1Q9UGI0 708 aa16.53■□□□□ 0.24
TNFRSF21-201ENST00000296861 INSRP06213 1382 aa16.53■□□□□ 0.24
TNFRSF21-201ENST00000296861 KRT24Q2M2I5 525 aa16.52■□□□□ 0.24
TNFRSF21-201ENST00000296861 ATP10AO60312 1499 aa16.52■□□□□ 0.24
TNFRSF21-201ENST00000296861 PRDM15P57071 1507 aaPredicted RBP16.52■□□□□ 0.23
TNFRSF21-201ENST00000296861 RTEL1-TNFRSF6BF6WH68 1400 aa16.52■□□□□ 0.23
TNFRSF21-201ENST00000296861 PTMAP06454 111 aaKnown RBP16.52■□□□□ 0.23
TNFRSF21-201ENST00000296861 PHACTR3Q96KR7 559 aa16.51■□□□□ 0.23
TNFRSF21-201ENST00000296861 KIF16BQ96L93 1317 aa16.51■□□□□ 0.23
TNFRSF21-201ENST00000296861 MSNP26038 577 aaKnown RBP16.51■□□□□ 0.23
TNFRSF21-201ENST00000296861 C14orf37Q86TY3 774 aa16.51■□□□□ 0.23
TNFRSF21-201ENST00000296861 POLR3AO14802 1390 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF21-201ENST00000296861 CD2BP2O95400 341 aaKnown RBP16.51■□□□□ 0.23
TNFRSF21-201ENST00000296861 CALD1Q05682 793 aaKnown RBP16.51■□□□□ 0.23
TNFRSF21-201ENST00000296861 TSHZ3Q63HK5 1081 aa16.51■□□□□ 0.23
TNFRSF21-201ENST00000296861 STAC3Q96MF2 364 aa16.51■□□□□ 0.23
TNFRSF21-201ENST00000296861 TRIM35Q9UPQ4 493 aa16.51■□□□□ 0.23
TNFRSF21-201ENST00000296861 FYB1O15117 783 aa16.5■□□□□ 0.23
TNFRSF21-201ENST00000296861 IDI1Q13907 227 aa16.5■□□□□ 0.23
TNFRSF21-201ENST00000296861 CDK19Q9BWU1 502 aa16.5■□□□□ 0.23
TNFRSF21-201ENST00000296861 C14orf93Q9H972 538 aaKnown RBP16.5■□□□□ 0.23
TNFRSF21-201ENST00000296861 ZFYVE16Q7Z3T8 1539 aa16.5■□□□□ 0.23
TNFRSF21-201ENST00000296861 ESPNB1AK53 854 aa16.49■□□□□ 0.23
TNFRSF21-201ENST00000296861 RBM10P98175 930 aaKnown RBP16.49■□□□□ 0.23
TNFRSF21-201ENST00000296861 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF21-201ENST00000296861 TBC1D9Q6ZT07 1266 aa16.49■□□□□ 0.23
TNFRSF21-201ENST00000296861 DTNBO60941 627 aa16.49■□□□□ 0.23
TNFRSF21-201ENST00000296861 NCKAP5LQ9HCH0 1330 aa16.48■□□□□ 0.23
TNFRSF21-201ENST00000296861 TRIM6-TRIM34B2RNG4 842 aa16.48■□□□□ 0.23
TNFRSF21-201ENST00000296861 DNTTIP2Q5QJE6 756 aaKnown RBP16.48■□□□□ 0.23
TNFRSF21-201ENST00000296861 ERVK-7P63135 1459 aa16.47■□□□□ 0.23
TNFRSF21-201ENST00000296861 ZNF518AQ6AHZ1 1483 aa16.47■□□□□ 0.23
TNFRSF21-201ENST00000296861 PLXNC1O60486 1568 aa16.47■□□□□ 0.23
TNFRSF21-201ENST00000296861 RILPL2Q969X0 211 aa16.47■□□□□ 0.23
TNFRSF21-201ENST00000296861 PRPF40AO75400 957 aaKnown RBP16.47■□□□□ 0.23
TNFRSF21-201ENST00000296861 NASPP49321 788 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF21-201ENST00000296861 GAS2L3Q86XJ1 694 aa16.47■□□□□ 0.23
TNFRSF21-201ENST00000296861 GAS2L2Q8NHY3 880 aa16.47■□□□□ 0.23
TNFRSF21-201ENST00000296861 OTUD7AQ8TE49 926 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF21-201ENST00000296861 ZBTB40Q9NUA8 1239 aa16.46■□□□□ 0.23
TNFRSF21-201ENST00000296861 UNC13BO14795 1591 aa16.46■□□□□ 0.23
TNFRSF21-201ENST00000296861 NINLQ9Y2I6 1382 aa16.46■□□□□ 0.23
TNFRSF21-201ENST00000296861 IQGAP3Q86VI3 1631 aa16.46■□□□□ 0.23
TNFRSF21-201ENST00000296861 K7ELQ4 463 aaPredicted RBP16.46■□□□□ 0.22
TNFRSF21-201ENST00000296861 NME9Q86XW9 330 aa16.46■□□□□ 0.22
TNFRSF21-201ENST00000296861 CASC1Q6TDU7 716 aa16.45■□□□□ 0.22
TNFRSF21-201ENST00000296861 LTV1Q96GA3 475 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF21-201ENST00000296861 PTPRTO14522 1441 aa16.45■□□□□ 0.22
TNFRSF21-201ENST00000296861 MCM10Q7L590 875 aa16.44■□□□□ 0.22
TNFRSF21-201ENST00000296861 FAM13BQ9NYF5 915 aa16.44■□□□□ 0.22
TNFRSF21-201ENST00000296861 RBM27Q9P2N5 1060 aaKnown RBP16.44■□□□□ 0.22
TNFRSF21-201ENST00000296861 NUCB1Q02818 461 aa16.43■□□□□ 0.22
TNFRSF21-201ENST00000296861 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
TNFRSF21-201ENST00000296861 C8orf58Q8NAV2 365 aa16.43■□□□□ 0.22
TNFRSF21-201ENST00000296861 EIF2AK4Q9P2K8 1649 aaKnown RBP16.43■□□□□ 0.22
TNFRSF21-201ENST00000296861 SMC5Q8IY18 1101 aa16.43■□□□□ 0.22
TNFRSF21-201ENST00000296861 CDC45O75419 566 aa16.42■□□□□ 0.22
TNFRSF21-201ENST00000296861 HDAC1Q13547 482 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF21-201ENST00000296861 A0A0U1RQG5 324 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF21-201ENST00000296861 F6X3S4 739 aa16.42■□□□□ 0.22
TNFRSF21-201ENST00000296861 AAMPQ13685 434 aa16.42■□□□□ 0.22
TNFRSF21-201ENST00000296861 LARP6Q9BRS8 491 aaKnown RBP16.42■□□□□ 0.22
TNFRSF21-201ENST00000296861 MBIPQ9NS73 344 aa16.41■□□□□ 0.22
TNFRSF21-201ENST00000296861 R3HCC1Q9Y3T6 440 aaKnown RBP16.41■□□□□ 0.22
TNFRSF21-201ENST00000296861 A0A1W2PP64 1363 aa16.41■□□□□ 0.22
TNFRSF21-201ENST00000296861 PKP1Q13835 747 aa16.41■□□□□ 0.22
TNFRSF21-201ENST00000296861 SULT6B1Q6IMI4 303 aa16.41■□□□□ 0.22
TNFRSF21-201ENST00000296861 NUTM2GQ5VZR2 741 aa16.4■□□□□ 0.22
TNFRSF21-201ENST00000296861 GNAI1P63096 354 aa16.4■□□□□ 0.22
TNFRSF21-201ENST00000296861 BCL11BQ9C0K0 894 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF21-201ENST00000296861 EXOC6BQ9Y2D4 811 aa16.4■□□□□ 0.22
TNFRSF21-201ENST00000296861 E9PCH4 1651 aa16.4■□□□□ 0.22
TNFRSF21-201ENST00000296861 NPATQ14207 1427 aa16.4■□□□□ 0.22
TNFRSF21-201ENST00000296861 MAP4K4O95819 1239 aaPredicted RBP16.39■□□□□ 0.22
TNFRSF21-201ENST00000296861 NEK4P51957 841 aa16.39■□□□□ 0.22
TNFRSF21-201ENST00000296861 ZGPATQ8N5A5 531 aaKnown RBP16.39■□□□□ 0.22
TNFRSF21-201ENST00000296861 COG3Q96JB2 828 aa16.39■□□□□ 0.22
TNFRSF21-201ENST00000296861 ANO2Q9NQ90 1003 aa16.39■□□□□ 0.22
TNFRSF21-201ENST00000296861 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.22
TNFRSF21-201ENST00000296861 NPC1L1Q9UHC9 1359 aa16.39■□□□□ 0.21
TNFRSF21-201ENST00000296861 GDPD2Q9HCC8 539 aa16.39■□□□□ 0.21
TNFRSF21-201ENST00000296861 YEATS2Q9ULM3 1422 aa16.39■□□□□ 0.21
TNFRSF21-201ENST00000296861 POGZQ7Z3K3 1410 aa16.39■□□□□ 0.21
TNFRSF21-201ENST00000296861 CLCN1P35523 988 aa16.38■□□□□ 0.21
TNFRSF21-201ENST00000296861 AEBP1Q8IUX7 1158 aa16.38■□□□□ 0.21
TNFRSF21-201ENST00000296861 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.38■□□□□ 0.21
TNFRSF21-201ENST00000296861 CLTCL1P53675 1640 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms