RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 NOB1Q9ULX3 412 aaKnown RBP12.84□□□□□ -0.35
CCDC36-201ENST00000296449 DDIT3P35638 169 aa12.83□□□□□ -0.36
CCDC36-201ENST00000296449 TMEM57Q8N5G2 664 aa12.83□□□□□ -0.36
CCDC36-201ENST00000296449 ZBTB40Q9NUA8 1239 aa12.83□□□□□ -0.36
CCDC36-201ENST00000296449 ISY1Q9ULR0 285 aaKnown RBP12.83□□□□□ -0.36
CCDC36-201ENST00000296449 GLI2P10070 1586 aa12.83□□□□□ -0.36
CCDC36-201ENST00000296449 RPGRIP1LQ68CZ1 1315 aa12.83□□□□□ -0.36
CCDC36-201ENST00000296449 U2SURPO15042 1029 aaKnown RBP12.82□□□□□ -0.36
CCDC36-201ENST00000296449 PLEKHG5O94827 1062 aa12.82□□□□□ -0.36
CCDC36-201ENST00000296449 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
CCDC36-201ENST00000296449 RBM25P49756 843 aaKnown RBP12.82□□□□□ -0.36
CCDC36-201ENST00000296449 MRE11P49959 708 aa12.82□□□□□ -0.36
CCDC36-201ENST00000296449 CABP2Q9NPB3 220 aa12.82□□□□□ -0.36
CCDC36-201ENST00000296449 IL16Q14005 1332 aa12.82□□□□□ -0.36
CCDC36-201ENST00000296449 COL3A1P02461 1466 aaPredicted RBP12.81□□□□□ -0.36
CCDC36-201ENST00000296449 ABCC11Q96J66 1382 aa12.81□□□□□ -0.36
CCDC36-201ENST00000296449 CLCN1P35523 988 aa12.81□□□□□ -0.36
CCDC36-201ENST00000296449 NUCB1Q02818 461 aa12.81□□□□□ -0.36
CCDC36-201ENST00000296449 CFAP65Q6ZU64 1925 aaKnown RBP12.81□□□□□ -0.36
CCDC36-201ENST00000296449 ARHGEF28Q8N1W1 1705 aaKnown RBP12.81□□□□□ -0.36
CCDC36-201ENST00000296449 SNX21Q969T3 373 aa12.8□□□□□ -0.36
CCDC36-201ENST00000296449 A0A1W2PP64 1363 aa12.8□□□□□ -0.36
CCDC36-201ENST00000296449 KIF16BQ96L93 1317 aa12.79□□□□□ -0.36
CCDC36-201ENST00000296449 LNPKQ9C0E8 428 aa12.79□□□□□ -0.36
CCDC36-201ENST00000296449 GGNBP2Q9H3C7 697 aa12.79□□□□□ -0.36
CCDC36-201ENST00000296449 GRPEL1Q9HAV7 217 aa12.79□□□□□ -0.36
CCDC36-201ENST00000296449 IPO8O15397 1037 aaKnown RBP12.78□□□□□ -0.36
CCDC36-201ENST00000296449 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
CCDC36-201ENST00000296449 RIPK4P57078 832 aa12.78□□□□□ -0.36
CCDC36-201ENST00000296449 NUTM2DQ5VT03 806 aaPredicted RBP12.78□□□□□ -0.36
CCDC36-201ENST00000296449 TNPO1Q92973 898 aaKnown RBP12.78□□□□□ -0.36
CCDC36-201ENST00000296449 GGT6Q6P531 493 aa12.77□□□□□ -0.36
CCDC36-201ENST00000296449 CHD1LQ86WJ1 897 aa12.77□□□□□ -0.36
CCDC36-201ENST00000296449 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.36
CCDC36-201ENST00000296449 SAFB2Q14151 953 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCDC36-201ENST00000296449 FRMPD1Q5SYB0 1578 aa12.76□□□□□ -0.37
CCDC36-201ENST00000296449 ALDH1L2Q3SY69 923 aa12.76□□□□□ -0.37
CCDC36-201ENST00000296449 BMP2KLQ5H9B9 411 aa12.76□□□□□ -0.37
CCDC36-201ENST00000296449 KIF2CQ99661 725 aa12.76□□□□□ -0.37
CCDC36-201ENST00000296449 CAMSAP1Q5T5Y3 1602 aa12.76□□□□□ -0.37
CCDC36-201ENST00000296449 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
CCDC36-201ENST00000296449 VGFO15240 615 aaPredicted RBP12.75□□□□□ -0.37
CCDC36-201ENST00000296449 HECW2Q9P2P5 1572 aa12.75□□□□□ -0.37
CCDC36-201ENST00000296449 MED14O60244 1454 aa12.75□□□□□ -0.37
CCDC36-201ENST00000296449 FYB1O15117 783 aa12.75□□□□□ -0.37
CCDC36-201ENST00000296449 HSP90AB1P08238 724 aaKnown RBP12.75□□□□□ -0.37
CCDC36-201ENST00000296449 RAB3GAP1Q15042 981 aa12.75□□□□□ -0.37
CCDC36-201ENST00000296449 NAP1L5Q96NT1 182 aaPredicted RBP12.75□□□□□ -0.37
CCDC36-201ENST00000296449 NEXMIFQ5QGS0 1516 aa12.75□□□□□ -0.37
CCDC36-201ENST00000296449 ASXL2Q76L83 1435 aa12.75□□□□□ -0.37
CCDC36-201ENST00000296449 CFAP74Q9C0B2 1584 aa12.74□□□□□ -0.37
CCDC36-201ENST00000296449 ABCC3O15438 1527 aa12.74□□□□□ -0.37
CCDC36-201ENST00000296449 PTMSP20962 102 aa12.74□□□□□ -0.37
CCDC36-201ENST00000296449 SRPK2P78362 688 aaKnown RBP12.74□□□□□ -0.37
CCDC36-201ENST00000296449 DIAPH1O60610 1272 aaKnown RBP12.74□□□□□ -0.37
CCDC36-201ENST00000296449 CD2BP2O95400 341 aaKnown RBP12.74□□□□□ -0.37
CCDC36-201ENST00000296449 GAS2L3Q86XJ1 694 aa12.74□□□□□ -0.37
CCDC36-201ENST00000296449 OSCARQ8IYS5 282 aa12.74□□□□□ -0.37
CCDC36-201ENST00000296449 GBP4Q96PP9 640 aa12.74□□□□□ -0.37
CCDC36-201ENST00000296449 PIK3C2BO00750 1634 aa12.73□□□□□ -0.37
CCDC36-201ENST00000296449 PPIP5K1Q6PFW1 1433 aa12.73□□□□□ -0.37
CCDC36-201ENST00000296449 PNPLA6Q8IY17 1366 aa12.73□□□□□ -0.37
CCDC36-201ENST00000296449 ERBB4Q15303 1308 aa12.73□□□□□ -0.37
CCDC36-201ENST00000296449 SIGLEC1Q9BZZ2 1709 aa12.73□□□□□ -0.37
CCDC36-201ENST00000296449 ESPNB1AK53 854 aa12.73□□□□□ -0.37
CCDC36-201ENST00000296449 BRPF1P55201 1214 aaPredicted RBP12.73□□□□□ -0.37
CCDC36-201ENST00000296449 RIMBP3CA6NJZ7 1639 aa12.72□□□□□ -0.37
CCDC36-201ENST00000296449 RIMBP3BA6NNM3 1639 aa12.72□□□□□ -0.37
CCDC36-201ENST00000296449 RIMBP3Q9UFD9 1639 aa12.72□□□□□ -0.37
CCDC36-201ENST00000296449 CD163L1Q9NR16 1453 aa12.72□□□□□ -0.37
CCDC36-201ENST00000296449 ZBTB7BO15156 539 aaPredicted RBP12.72□□□□□ -0.37
CCDC36-201ENST00000296449 ANKRD45Q5TZF3 282 aa12.72□□□□□ -0.37
CCDC36-201ENST00000296449 ZNF428Q96B54 188 aa12.72□□□□□ -0.37
CCDC36-201ENST00000296449 SKOR2Q2VWA4 1001 aaPredicted RBP12.72□□□□□ -0.37
CCDC36-201ENST00000296449 GCC1Q96CN9 775 aa12.72□□□□□ -0.37
CCDC36-201ENST00000296449 TERF2IPQ9NYB0 399 aa12.72□□□□□ -0.37
CCDC36-201ENST00000296449 STK26Q9P289 416 aa12.72□□□□□ -0.37
CCDC36-201ENST00000296449 REREQ9P2R6 1566 aa12.71□□□□□ -0.37
CCDC36-201ENST00000296449 TBC1D9Q6ZT07 1266 aa12.71□□□□□ -0.37
CCDC36-201ENST00000296449 MLH3Q9UHC1 1453 aa12.71□□□□□ -0.37
CCDC36-201ENST00000296449 POGZQ7Z3K3 1410 aa12.71□□□□□ -0.38
CCDC36-201ENST00000296449 ATAD2Q6PL18 1390 aa12.71□□□□□ -0.38
CCDC36-201ENST00000296449 CDC42BPGQ6DT37 1551 aa12.7□□□□□ -0.38
CCDC36-201ENST00000296449 K7ELQ4 463 aaPredicted RBP12.7□□□□□ -0.38
CCDC36-201ENST00000296449 FCHSD2O94868 740 aa12.7□□□□□ -0.38
CCDC36-201ENST00000296449 C1orf115Q9H7X2 142 aa12.7□□□□□ -0.38
CCDC36-201ENST00000296449 FOXD4L1Q9NU39 408 aa12.7□□□□□ -0.38
CCDC36-201ENST00000296449 PIK3R4Q99570 1358 aa12.7□□□□□ -0.38
CCDC36-201ENST00000296449 LRRC7Q96NW7 1537 aa12.7□□□□□ -0.38
CCDC36-201ENST00000296449 HSP90AA1P07900 732 aaKnown RBP12.7□□□□□ -0.38
CCDC36-201ENST00000296449 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
CCDC36-201ENST00000296449 CHMP4BQ9H444 224 aaKnown RBP12.7□□□□□ -0.38
CCDC36-201ENST00000296449 MINK1Q8N4C8 1332 aaPredicted RBP12.69□□□□□ -0.38
CCDC36-201ENST00000296449 PTPRMP28827 1452 aa12.69□□□□□ -0.38
CCDC36-201ENST00000296449 SIRT2Q8IXJ6 389 aa12.69□□□□□ -0.38
CCDC36-201ENST00000296449 MRPL50Q8N5N7 158 aaKnown RBP12.69□□□□□ -0.38
CCDC36-201ENST00000296449 ARHGAP45Q92619 1136 aa12.69□□□□□ -0.38
CCDC36-201ENST00000296449 PTCH1Q13635 1447 aa12.69□□□□□ -0.38
CCDC36-201ENST00000296449 FAM135BQ49AJ0 1406 aa12.69□□□□□ -0.38
CCDC36-201ENST00000296449 CLTCQ00610 1675 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms