RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 TAF3Q5VWG9 929 aa13.18□□□□□ -0.3
PBRM1-201ENST00000296302 VPS53Q5VIR6 699 aa13.18□□□□□ -0.3
PBRM1-201ENST00000296302 TWISTNBQ3B726 338 aaPredicted RBP13.17□□□□□ -0.3
PBRM1-201ENST00000296302 BCL11BQ9C0K0 894 aaPredicted RBP13.17□□□□□ -0.3
PBRM1-201ENST00000296302 SURF6O75683 361 aaKnown RBP13.17□□□□□ -0.3
PBRM1-201ENST00000296302 DCTN1Q14203 1278 aa13.17□□□□□ -0.3
PBRM1-201ENST00000296302 KRT85P78386 507 aa13.17□□□□□ -0.3
PBRM1-201ENST00000296302 FSD1Q9BTV5 496 aa13.17□□□□□ -0.3
PBRM1-201ENST00000296302 TNMDQ9H2S6 317 aa13.17□□□□□ -0.3
PBRM1-201ENST00000296302 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
PBRM1-201ENST00000296302 CAGE1Q8TC20 777 aa13.16□□□□□ -0.3
PBRM1-201ENST00000296302 PDIA4P13667 645 aaKnown RBP13.16□□□□□ -0.3
PBRM1-201ENST00000296302 GTF2E1P29083 439 aaPredicted RBP13.16□□□□□ -0.3
PBRM1-201ENST00000296302 RDXP35241 583 aaKnown RBP13.16□□□□□ -0.3
PBRM1-201ENST00000296302 SMARCE1Q969G3 411 aa13.16□□□□□ -0.3
PBRM1-201ENST00000296302 GNAI2P04899 355 aa13.16□□□□□ -0.3
PBRM1-201ENST00000296302 SLFN5Q08AF3 891 aa13.16□□□□□ -0.3
PBRM1-201ENST00000296302 CCDC30Q5VVM6 783 aa13.16□□□□□ -0.3
PBRM1-201ENST00000296302 AMOTL1Q8IY63 956 aa13.16□□□□□ -0.3
PBRM1-201ENST00000296302 GAPVD1Q14C86 1478 aa13.15□□□□□ -0.3
PBRM1-201ENST00000296302 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.15□□□□□ -0.3
PBRM1-201ENST00000296302 ANKRD1Q15327 319 aa13.15□□□□□ -0.3
PBRM1-201ENST00000296302 NAP1L1P55209 391 aaKnown RBP13.15□□□□□ -0.3
PBRM1-201ENST00000296302 FILIP1LQ4L180 1135 aa13.15□□□□□ -0.3
PBRM1-201ENST00000296302 C1orf115Q9H7X2 142 aa13.15□□□□□ -0.3
PBRM1-201ENST00000296302 CYP46A1Q9Y6A2 500 aa13.15□□□□□ -0.3
PBRM1-201ENST00000296302 CALRP27797 417 aaKnown RBP13.15□□□□□ -0.31
PBRM1-201ENST00000296302 ZNF428Q96B54 188 aa13.15□□□□□ -0.31
PBRM1-201ENST00000296302 PDCL3Q9H2J4 239 aa13.15□□□□□ -0.31
PBRM1-201ENST00000296302 DHX16O60231 1041 aaKnown RBP13.14□□□□□ -0.31
PBRM1-201ENST00000296302 TSR2Q969E8 191 aaKnown RBP13.14□□□□□ -0.31
PBRM1-201ENST00000296302 PRKAR2BP31323 418 aa13.14□□□□□ -0.31
PBRM1-201ENST00000296302 NBPF1Q3BBV0 1214 aa13.14□□□□□ -0.31
PBRM1-201ENST00000296302 ERC1Q8IUD2 1116 aa13.14□□□□□ -0.31
PBRM1-201ENST00000296302 XBP1P17861 261 aa13.14□□□□□ -0.31
PBRM1-201ENST00000296302 FMNL2Q96PY5 1086 aa13.13□□□□□ -0.31
PBRM1-201ENST00000296302 BRMS1Q9HCU9 246 aa13.13□□□□□ -0.31
PBRM1-201ENST00000296302 CFTRP13569 1480 aa13.13□□□□□ -0.31
PBRM1-201ENST00000296302 PLEKHH2Q8IVE3 1493 aa13.13□□□□□ -0.31
PBRM1-201ENST00000296302 STK38Q15208 465 aa13.13□□□□□ -0.31
PBRM1-201ENST00000296302 RRP12Q5JTH9 1297 aaKnown RBP13.13□□□□□ -0.31
PBRM1-201ENST00000296302 SRCIN1Q9C0H9 1055 aa13.13□□□□□ -0.31
PBRM1-201ENST00000296302 CABP2Q9NPB3 220 aa13.13□□□□□ -0.31
PBRM1-201ENST00000296302 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
PBRM1-201ENST00000296302 JMYQ8N9B5 988 aa13.13□□□□□ -0.31
PBRM1-201ENST00000296302 CCDC191Q8NCU4 936 aa13.13□□□□□ -0.31
PBRM1-201ENST00000296302 ERLIN1O75477 346 aa13.13□□□□□ -0.31
PBRM1-201ENST00000296302 CCT4P50991 539 aaKnown RBP13.13□□□□□ -0.31
PBRM1-201ENST00000296302 EIF3JO75822 258 aaKnown RBP13.12□□□□□ -0.31
PBRM1-201ENST00000296302 LRRCC1Q9C099 1032 aa13.12□□□□□ -0.31
PBRM1-201ENST00000296302 ERBINQ96RT1 1412 aa13.12□□□□□ -0.31
PBRM1-201ENST00000296302 WASHC4Q2M389 1173 aa13.12□□□□□ -0.31
PBRM1-201ENST00000296302 ZSCAN31Q96LW9 406 aaPredicted RBP13.12□□□□□ -0.31
PBRM1-201ENST00000296302 NEUROD6Q96NK8 337 aa13.11□□□□□ -0.31
PBRM1-201ENST00000296302 NOL10Q9BSC4 688 aaKnown RBP13.11□□□□□ -0.31
PBRM1-201ENST00000296302 RIC3Q7Z5B4 369 aa13.11□□□□□ -0.31
PBRM1-201ENST00000296302 NUP62CLQ9H1M0 184 aa13.11□□□□□ -0.31
PBRM1-201ENST00000296302 PODXL2Q9NZ53 605 aa13.11□□□□□ -0.31
PBRM1-201ENST00000296302 MPNDQ8N594 471 aa13.11□□□□□ -0.31
PBRM1-201ENST00000296302 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
PBRM1-201ENST00000296302 EHBP1L1Q8N3D4 1523 aa13.11□□□□□ -0.31
PBRM1-201ENST00000296302 KIF2AO00139 706 aaPredicted RBP13.11□□□□□ -0.31
PBRM1-201ENST00000296302 CFAP70Q5T0N1 1121 aa13.11□□□□□ -0.31
PBRM1-201ENST00000296302 G3V3G9 751 aa13.1□□□□□ -0.31
PBRM1-201ENST00000296302 SERPINC1P01008 464 aa13.1□□□□□ -0.31
PBRM1-201ENST00000296302 AXDND1Q5T1B0 1012 aaPredicted RBP13.1□□□□□ -0.31
PBRM1-201ENST00000296302 DCAF8Q5TAQ9 597 aa13.1□□□□□ -0.31
PBRM1-201ENST00000296302 LARP1BQ659C4 914 aaKnown RBP13.1□□□□□ -0.31
PBRM1-201ENST00000296302 MYO6Q9UM54 1294 aa13.1□□□□□ -0.31
PBRM1-201ENST00000296302 EFCAB5A4FU69 1503 aa13.1□□□□□ -0.31
PBRM1-201ENST00000296302 CBFA2T2O43439 604 aa13.1□□□□□ -0.31
PBRM1-201ENST00000296302 TIAM1Q13009 1591 aa13.1□□□□□ -0.31
PBRM1-201ENST00000296302 SYCE3A1L190 88 aa13.1□□□□□ -0.31
PBRM1-201ENST00000296302 OFD1O75665 1012 aa13.09□□□□□ -0.31
PBRM1-201ENST00000296302 MCM5P33992 734 aa13.09□□□□□ -0.31
PBRM1-201ENST00000296302 TTLL5Q6EMB2 1281 aa13.09□□□□□ -0.31
PBRM1-201ENST00000296302 CEP57L1Q8IYX8 460 aa13.09□□□□□ -0.31
PBRM1-201ENST00000296302 DACH1Q9UI36 760 aa13.09□□□□□ -0.31
PBRM1-201ENST00000296302 RPAP2Q8IXW5 612 aaPredicted RBP13.09□□□□□ -0.31
PBRM1-201ENST00000296302 TSPYL1Q9H0U9 437 aa13.09□□□□□ -0.31
PBRM1-201ENST00000296302 PRXQ9BXM0 1461 aa13.09□□□□□ -0.31
PBRM1-201ENST00000296302 WWC1Q8IX03 1113 aa13.09□□□□□ -0.31
PBRM1-201ENST00000296302 PPP6R1Q9UPN7 881 aa13.09□□□□□ -0.31
PBRM1-201ENST00000296302 TBC1D2Q9BYX2 928 aa13.08□□□□□ -0.32
PBRM1-201ENST00000296302 SART3Q15020 963 aaKnown RBP13.08□□□□□ -0.32
PBRM1-201ENST00000296302 SPATA32Q96LK8 384 aa13.08□□□□□ -0.32
PBRM1-201ENST00000296302 CFAP45Q9UL16 551 aa13.08□□□□□ -0.32
PBRM1-201ENST00000296302 UBE2Q2Q8WVN8 375 aa13.08□□□□□ -0.32
PBRM1-201ENST00000296302 ME1P48163 572 aa13.08□□□□□ -0.32
PBRM1-201ENST00000296302 USP8P40818 1118 aa13.07□□□□□ -0.32
PBRM1-201ENST00000296302 CEBPZQ03701 1054 aaKnown RBP13.07□□□□□ -0.32
PBRM1-201ENST00000296302 TMEM132EQ6IEE7 984 aa13.07□□□□□ -0.32
PBRM1-201ENST00000296302 PPFIBP1Q86W92 1011 aa13.07□□□□□ -0.32
PBRM1-201ENST00000296302 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
PBRM1-201ENST00000296302 MAP3K11Q16584 847 aa13.07□□□□□ -0.32
PBRM1-201ENST00000296302 RAD54L2Q9Y4B4 1467 aa13.07□□□□□ -0.32
PBRM1-201ENST00000296302 KIAA0754O94854 1291 aa13.07□□□□□ -0.32
PBRM1-201ENST00000296302 UBXN4Q92575 508 aa13.06□□□□□ -0.32
PBRM1-201ENST00000296302 ZNHIT6Q9NWK9 470 aaKnown RBP13.06□□□□□ -0.32
PBRM1-201ENST00000296302 MAGEC2Q9UBF1 373 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms