RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ZRANB1Q9UGI0 708 aa30.43■■■□□ 2.46
PTX3-201ENST00000295927 TTC21BQ7Z4L5 1316 aa30.43■■■□□ 2.46
PTX3-201ENST00000295927 SALL2Q9Y467 1007 aaPredicted RBP30.41■■■□□ 2.46
PTX3-201ENST00000295927 MAP2P11137 1827 aaKnown RBP30.4■■■□□ 2.46
PTX3-201ENST00000295927 NGDNQ8NEJ9 315 aaKnown RBP30.4■■■□□ 2.46
PTX3-201ENST00000295927 SSH2Q76I76 1423 aa30.4■■■□□ 2.46
PTX3-201ENST00000295927 PROSER2Q86WR7 435 aaPredicted RBP30.39■■■□□ 2.46
PTX3-201ENST00000295927 COG3Q96JB2 828 aa30.39■■■□□ 2.46
PTX3-201ENST00000295927 STRCP1A6NGW2 1772 aa30.38■■■□□ 2.45
PTX3-201ENST00000295927 C14orf37Q86TY3 774 aa30.38■■■□□ 2.45
PTX3-201ENST00000295927 STRCQ7RTU9 1775 aa30.38■■■□□ 2.45
PTX3-201ENST00000295927 COL3A1P02461 1466 aaPredicted RBP30.37■■■□□ 2.45
PTX3-201ENST00000295927 SMG6Q86US8 1419 aaKnown RBP30.37■■■□□ 2.45
PTX3-201ENST00000295927 CCDC146Q8IYE0 955 aa30.36■■■□□ 2.45
PTX3-201ENST00000295927 FBLN1P23142 703 aa30.35■■■□□ 2.45
PTX3-201ENST00000295927 POLKQ9UBT6 870 aa30.34■■■□□ 2.45
PTX3-201ENST00000295927 PNPLA6Q8IY17 1366 aa30.33■■■□□ 2.45
PTX3-201ENST00000295927 TTC21AQ8NDW8 1320 aa30.32■■■□□ 2.45
PTX3-201ENST00000295927 NUDCQ9Y266 331 aa30.32■■■□□ 2.44
PTX3-201ENST00000295927 AATKQ6ZMQ8 1374 aa30.32■■■□□ 2.44
PTX3-201ENST00000295927 OVOS2A0A0J9YW53 1432 aa30.31■■■□□ 2.44
PTX3-201ENST00000295927 OVOS2Q6IE36 1432 aa30.31■■■□□ 2.44
PTX3-201ENST00000295927 PDE3BQ13370 1112 aa30.3■■■□□ 2.44
PTX3-201ENST00000295927 PHF8Q9UPP1 1060 aa30.3■■■□□ 2.44
PTX3-201ENST00000295927 SUPT16HQ9Y5B9 1047 aaKnown RBP30.28■■■□□ 2.44
PTX3-201ENST00000295927 APAF1O14727 1248 aa30.27■■■□□ 2.44
PTX3-201ENST00000295927 PPM1GO15355 546 aaPredicted RBP30.26■■■□□ 2.44
PTX3-201ENST00000295927 EMILIN1Q9Y6C2 1016 aa30.26■■■□□ 2.44
PTX3-201ENST00000295927 PIK3C2AO00443 1686 aa30.26■■■□□ 2.43
PTX3-201ENST00000295927 U2AF1L5P0DN76 240 aaPredicted RBP30.26■■■□□ 2.43
PTX3-201ENST00000295927 U2AF1Q01081 240 aaKnown RBP eCLIP30.26■■■□□ 2.43
PTX3-201ENST00000295927 DIAPH1O60610 1272 aaKnown RBP30.25■■■□□ 2.43
PTX3-201ENST00000295927 ESCO1Q5FWF5 840 aa30.25■■■□□ 2.43
PTX3-201ENST00000295927 C19orf44Q9H6X5 657 aa30.25■■■□□ 2.43
PTX3-201ENST00000295927 TMEM94Q12767 1356 aa30.24■■■□□ 2.43
PTX3-201ENST00000295927 RUNDC1Q96C34 613 aa30.24■■■□□ 2.43
PTX3-201ENST00000295927 CDK12Q9NYV4 1490 aaPredicted RBP30.23■■■□□ 2.43
PTX3-201ENST00000295927 RRS1Q15050 365 aaKnown RBP30.22■■■□□ 2.43
PTX3-201ENST00000295927 NCOA3Q9Y6Q9 1424 aa30.22■■■□□ 2.43
PTX3-201ENST00000295927 USP31Q70CQ4 1352 aa30.22■■■□□ 2.43
PTX3-201ENST00000295927 U2SURPO15042 1029 aaKnown RBP30.22■■■□□ 2.43
PTX3-201ENST00000295927 ZNF521Q96K83 1311 aa30.21■■■□□ 2.43
PTX3-201ENST00000295927 CDCA7LQ96GN5 454 aa30.21■■■□□ 2.43
PTX3-201ENST00000295927 NEFLP07196 543 aa30.19■■■□□ 2.42
PTX3-201ENST00000295927 NGEFQ8N5V2 710 aa30.18■■■□□ 2.42
PTX3-201ENST00000295927 IQSEC2Q5JU85 1478 aa30.18■■■□□ 2.42
PTX3-201ENST00000295927 ORAI2Q96SN7 254 aa30.18■■■□□ 2.42
PTX3-201ENST00000295927 FKBP8Q14318 412 aa30.17■■■□□ 2.42
PTX3-201ENST00000295927 USP54Q70EL1 1684 aa30.17■■■□□ 2.42
PTX3-201ENST00000295927 MARF1Q9Y4F3 1742 aaKnown RBP30.17■■■□□ 2.42
PTX3-201ENST00000295927 C1orf167Q5SNV9 1468 aa30.16■■■□□ 2.42
PTX3-201ENST00000295927 PAK3O75914 559 aaPredicted RBP30.15■■■□□ 2.42
PTX3-201ENST00000295927 TCP11L2Q8N4U5 519 aa30.15■■■□□ 2.42
PTX3-201ENST00000295927 XIRP1Q702N8 1843 aaKnown RBP30.15■■■□□ 2.42
PTX3-201ENST00000295927 DCCP43146 1447 aa30.15■■■□□ 2.42
PTX3-201ENST00000295927 NLRP6P59044 892 aa30.14■■■□□ 2.41
PTX3-201ENST00000295927 PSME1Q06323 249 aa30.14■■■□□ 2.41
PTX3-201ENST00000295927 ATF3P18847 181 aa30.13■■■□□ 2.41
PTX3-201ENST00000295927 KIF1AQ12756 1690 aa30.12■■■□□ 2.41
PTX3-201ENST00000295927 ABTB2Q8N961 1025 aa30.12■■■□□ 2.41
PTX3-201ENST00000295927 PEAK1Q9H792 1746 aa30.12■■■□□ 2.41
PTX3-201ENST00000295927 IL13P35225 146 aa30.12■■■□□ 2.41
PTX3-201ENST00000295927 GOLGA2Q08379 1002 aa30.12■■■□□ 2.41
PTX3-201ENST00000295927 SOX12O15370 315 aa30.11■■■□□ 2.41
PTX3-201ENST00000295927 PLEKHF1Q96S99 279 aa30.11■■■□□ 2.41
PTX3-201ENST00000295927 MST1RQ04912 1400 aa30.11■■■□□ 2.41
PTX3-201ENST00000295927 NUTM2GQ5VZR2 741 aa30.1■■■□□ 2.41
PTX3-201ENST00000295927 RRP7AQ9Y3A4 280 aaKnown RBP30.09■■■□□ 2.41
PTX3-201ENST00000295927 LRRC7Q96NW7 1537 aa30.09■■■□□ 2.41
PTX3-201ENST00000295927 FOXO3O43524 673 aa30.08■■■□□ 2.41
PTX3-201ENST00000295927 ZNF335Q9H4Z2 1342 aaPredicted RBP30.08■■■□□ 2.41
PTX3-201ENST00000295927 NEUROD2Q15784 382 aa30.07■■■□□ 2.4
PTX3-201ENST00000295927 MSH6P52701 1360 aa30.06■■■□□ 2.4
PTX3-201ENST00000295927 WWC1Q8IX03 1113 aa30.06■■■□□ 2.4
PTX3-201ENST00000295927 PNNQ9H307 717 aaKnown RBP30.06■■■□□ 2.4
PTX3-201ENST00000295927 MAP3K19Q56UN5 1328 aa30.06■■■□□ 2.4
PTX3-201ENST00000295927 FCHSD2O94868 740 aa30.06■■■□□ 2.4
PTX3-201ENST00000295927 CADPS2Q86UW7 1296 aa30.06■■■□□ 2.4
PTX3-201ENST00000295927 SLFN5Q08AF3 891 aa30.05■■■□□ 2.4
PTX3-201ENST00000295927 MAPK8IP3Q9UPT6 1336 aa30.04■■■□□ 2.4
PTX3-201ENST00000295927 NCBP3Q53F19 620 aaKnown RBP30.04■■■□□ 2.4
PTX3-201ENST00000295927 PHF23Q9BUL5 403 aaPredicted RBP30.04■■■□□ 2.4
PTX3-201ENST00000295927 DUSP27Q5VZP5 1158 aa30.03■■■□□ 2.4
PTX3-201ENST00000295927 RSPH6AQ9H0K4 717 aa30.03■■■□□ 2.4
PTX3-201ENST00000295927 TRPM3Q9HCF6 1732 aaPredicted RBP30.03■■■□□ 2.4
PTX3-201ENST00000295927 XPCQ01831 940 aaPredicted RBP30.02■■■□□ 2.4
PTX3-201ENST00000295927 CCDC27Q2M243 656 aa30.02■■■□□ 2.4
PTX3-201ENST00000295927 SBNO1A3KN83 1393 aa30.01■■■□□ 2.4
PTX3-201ENST00000295927 RNF123Q5XPI4 1314 aa30.01■■■□□ 2.4
PTX3-201ENST00000295927 IRX6P78412 446 aaPredicted RBP30.01■■■□□ 2.39
PTX3-201ENST00000295927 EIF4A2Q14240 407 aaKnown RBP30.01■■■□□ 2.39
PTX3-201ENST00000295927 DMRT2Q9Y5R5 561 aa30.01■■■□□ 2.39
PTX3-201ENST00000295927 HMOX1P09601 288 aa30■■■□□ 2.39
PTX3-201ENST00000295927 HSP90AB2PQ58FF8 381 aa30■■■□□ 2.39
PTX3-201ENST00000295927 TRMT2AQ8IZ69 625 aaKnown RBP30■■■□□ 2.39
PTX3-201ENST00000295927 SPINK5Q9NQ38 1064 aaPredicted RBP30■■■□□ 2.39
PTX3-201ENST00000295927 RCAN3Q9UKA8 241 aa30■■■□□ 2.39
PTX3-201ENST00000295927 PRKAR2BP31323 418 aa29.99■■■□□ 2.39
PTX3-201ENST00000295927 KRT28Q7Z3Y7 464 aa29.99■■■□□ 2.39
PTX3-201ENST00000295927 FLT4P35916 1363 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms