RNA–Protein interactions for RNA: ENST00000294256.12

SYVN1-201, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYVN1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-201ENST00000294256 SSH1Q8WYL5 1049 aa22.48■■□□□ 1.19
SYVN1-201ENST00000294256 ATAD2Q6PL18 1390 aa22.48■■□□□ 1.19
SYVN1-201ENST00000294256 ZKSCAN2Q63HK3 967 aa22.47■■□□□ 1.19
SYVN1-201ENST00000294256 ARHGAP31Q2M1Z3 1444 aa22.47■■□□□ 1.19
SYVN1-201ENST00000294256 PRKAR2BP31323 418 aa22.47■■□□□ 1.19
SYVN1-201ENST00000294256 PLEKHF1Q96S99 279 aa22.47■■□□□ 1.19
SYVN1-201ENST00000294256 PDZRN3Q9UPQ7 1066 aa22.47■■□□□ 1.19
SYVN1-201ENST00000294256 IQSEC2Q5JU85 1478 aa22.47■■□□□ 1.19
SYVN1-201ENST00000294256 SOX12O15370 315 aa22.47■■□□□ 1.19
SYVN1-201ENST00000294256 DZIP1LQ8IYY4 767 aaKnown RBP22.47■■□□□ 1.19
SYVN1-201ENST00000294256 EMILIN1Q9Y6C2 1016 aa22.47■■□□□ 1.19
SYVN1-201ENST00000294256 PTPRMP28827 1452 aa22.46■■□□□ 1.19
SYVN1-201ENST00000294256 NSD2O96028 1365 aa22.46■■□□□ 1.19
SYVN1-201ENST00000294256 NME9Q86XW9 330 aa22.45■■□□□ 1.18
SYVN1-201ENST00000294256 CCDC27Q2M243 656 aa22.45■■□□□ 1.18
SYVN1-201ENST00000294256 PUS7Q96PZ0 661 aaKnown RBP22.45■■□□□ 1.18
SYVN1-201ENST00000294256 NOB1Q9ULX3 412 aaKnown RBP22.45■■□□□ 1.18
SYVN1-201ENST00000294256 PMFBP1Q8TBY8 1022 aa22.44■■□□□ 1.18
SYVN1-201ENST00000294256 RRS1Q15050 365 aaKnown RBP22.43■■□□□ 1.18
SYVN1-201ENST00000294256 PREX1Q8TCU6 1659 aa22.43■■□□□ 1.18
SYVN1-201ENST00000294256 TRIM27P14373 513 aa22.43■■□□□ 1.18
SYVN1-201ENST00000294256 MVPQ14764 893 aaKnown RBP22.43■■□□□ 1.18
SYVN1-201ENST00000294256 TMEM131LA2VDJ0 1609 aa22.42■■□□□ 1.18
SYVN1-201ENST00000294256 PHACTR3Q96KR7 559 aa22.41■■□□□ 1.18
SYVN1-201ENST00000294256 POLKQ9UBT6 870 aa22.41■■□□□ 1.18
SYVN1-201ENST00000294256 RWDD1Q9H446 243 aaPredicted RBP22.41■■□□□ 1.18
SYVN1-201ENST00000294256 CD163L1Q9NR16 1453 aa22.39■■□□□ 1.18
SYVN1-201ENST00000294256 ALKQ9UM73 1620 aa22.39■■□□□ 1.17
SYVN1-201ENST00000294256 SPRYD3Q8NCJ5 442 aa22.39■■□□□ 1.17
SYVN1-201ENST00000294256 NFKBIBQ15653 356 aa22.38■■□□□ 1.17
SYVN1-201ENST00000294256 SLKQ9H2G2 1235 aaPredicted RBP22.38■■□□□ 1.17
SYVN1-201ENST00000294256 TMEM57Q8N5G2 664 aa22.38■■□□□ 1.17
SYVN1-201ENST00000294256 ZFYVE9O95405 1425 aa22.37■■□□□ 1.17
SYVN1-201ENST00000294256 RIMS2Q9UQ26 1411 aa22.37■■□□□ 1.17
SYVN1-201ENST00000294256 NINLQ9Y2I6 1382 aa22.37■■□□□ 1.17
SYVN1-201ENST00000294256 DCTN1Q14203 1278 aa22.35■■□□□ 1.17
SYVN1-201ENST00000294256 ATF7IPQ6VMQ6 1270 aa22.35■■□□□ 1.17
SYVN1-201ENST00000294256 METP08581 1390 aa22.34■■□□□ 1.17
SYVN1-201ENST00000294256 NUDT16Q96DE0 195 aaKnown RBP22.34■■□□□ 1.17
SYVN1-201ENST00000294256 C1orf115Q9H7X2 142 aa22.34■■□□□ 1.17
SYVN1-201ENST00000294256 FAM83GA6ND36 823 aa22.33■■□□□ 1.17
SYVN1-201ENST00000294256 WASLO00401 505 aaPredicted RBP22.33■■□□□ 1.17
SYVN1-201ENST00000294256 USP32Q8NFA0 1604 aa22.33■■□□□ 1.17
SYVN1-201ENST00000294256 USP19O94966 1318 aa22.32■■□□□ 1.16
SYVN1-201ENST00000294256 FRAT2O75474 233 aaPredicted RBP22.32■■□□□ 1.16
SYVN1-201ENST00000294256 TSPYL6Q8N831 410 aa22.32■■□□□ 1.16
SYVN1-201ENST00000294256 RSPH6AQ9H0K4 717 aa22.32■■□□□ 1.16
SYVN1-201ENST00000294256 CLTCQ00610 1675 aaKnown RBP22.31■■□□□ 1.16
SYVN1-201ENST00000294256 ARHGEF40Q8TER5 1519 aa22.31■■□□□ 1.16
SYVN1-201ENST00000294256 FCHSD2O94868 740 aa22.31■■□□□ 1.16
SYVN1-201ENST00000294256 CEBPAP49715 358 aaPredicted RBP22.31■■□□□ 1.16
SYVN1-201ENST00000294256 A2ML1A8K2U0 1454 aa22.3■■□□□ 1.16
SYVN1-201ENST00000294256 COG3Q96JB2 828 aa22.3■■□□□ 1.16
SYVN1-201ENST00000294256 PPIP5K1Q6PFW1 1433 aa22.3■■□□□ 1.16
SYVN1-201ENST00000294256 MFAP1P55081 439 aaKnown RBP22.3■■□□□ 1.16
SYVN1-201ENST00000294256 UPF2Q9HAU5 1272 aaKnown RBP22.3■■□□□ 1.16
SYVN1-201ENST00000294256 PNNQ9H307 717 aaKnown RBP22.29■■□□□ 1.16
SYVN1-201ENST00000294256 COL3A1P02461 1466 aaPredicted RBP22.29■■□□□ 1.16
SYVN1-201ENST00000294256 NLRP1Q9C000 1473 aa22.29■■□□□ 1.16
SYVN1-201ENST00000294256 SLC26A8Q96RN1 970 aa22.28■■□□□ 1.16
SYVN1-201ENST00000294256 DDX19BQ9UMR2 479 aa22.28■■□□□ 1.16
SYVN1-201ENST00000294256 LNPKQ9C0E8 428 aa22.27■■□□□ 1.16
SYVN1-201ENST00000294256 RTN4Q9NQC3 1192 aaKnown RBP22.26■■□□□ 1.15
SYVN1-201ENST00000294256 ZMYM3Q14202 1370 aa22.26■■□□□ 1.15
SYVN1-201ENST00000294256 NFE2L2Q16236 605 aa22.25■■□□□ 1.15
SYVN1-201ENST00000294256 CCDC61Q9Y6R9 512 aa22.25■■□□□ 1.15
SYVN1-201ENST00000294256 RIMBP3CA6NJZ7 1639 aa22.24■■□□□ 1.15
SYVN1-201ENST00000294256 RIMBP3BA6NNM3 1639 aa22.24■■□□□ 1.15
SYVN1-201ENST00000294256 RIMBP3Q9UFD9 1639 aa22.24■■□□□ 1.15
SYVN1-201ENST00000294256 IPO8O15397 1037 aaKnown RBP22.24■■□□□ 1.15
SYVN1-201ENST00000294256 AEBP1Q8IUX7 1158 aa22.24■■□□□ 1.15
SYVN1-201ENST00000294256 USP35Q9P2H5 1018 aa22.24■■□□□ 1.15
SYVN1-201ENST00000294256 ADGRB2O60241 1585 aa22.23■■□□□ 1.15
SYVN1-201ENST00000294256 DIP2BQ9P265 1576 aa22.23■■□□□ 1.15
SYVN1-201ENST00000294256 IL13P35225 146 aa22.22■■□□□ 1.15
SYVN1-201ENST00000294256 MBIPQ9NS73 344 aa22.22■■□□□ 1.15
SYVN1-201ENST00000294256 LRRC7Q96NW7 1537 aa22.22■■□□□ 1.15
SYVN1-201ENST00000294256 CT47B1P0C2W7 299 aaPredicted RBP22.22■■□□□ 1.15
SYVN1-201ENST00000294256 PNPLA6Q8IY17 1366 aa22.21■■□□□ 1.15
SYVN1-201ENST00000294256 KIF16BQ96L93 1317 aa22.21■■□□□ 1.15
SYVN1-201ENST00000294256 KRT24Q2M2I5 525 aa22.21■■□□□ 1.15
SYVN1-201ENST00000294256 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.2■■□□□ 1.15
SYVN1-201ENST00000294256 BECN1Q14457 450 aa22.2■■□□□ 1.14
SYVN1-201ENST00000294256 SULT6B1Q6IMI4 303 aa22.2■■□□□ 1.14
SYVN1-201ENST00000294256 PRR36Q9H6K5 1346 aa22.2■■□□□ 1.14
SYVN1-201ENST00000294256 C8orf58Q8NAV2 365 aa22.2■■□□□ 1.14
SYVN1-201ENST00000294256 IL16Q14005 1332 aa22.19■■□□□ 1.14
SYVN1-201ENST00000294256 ZBTB40Q9NUA8 1239 aa22.19■■□□□ 1.14
SYVN1-201ENST00000294256 AAMPQ13685 434 aa22.19■■□□□ 1.14
SYVN1-201ENST00000294256 VAMP4O75379 141 aa22.18■■□□□ 1.14
SYVN1-201ENST00000294256 TWISTNBQ3B726 338 aaPredicted RBP22.18■■□□□ 1.14
SYVN1-201ENST00000294256 ANKRD45Q5TZF3 282 aa22.18■■□□□ 1.14
SYVN1-201ENST00000294256 IL27Q8NEV9 243 aa22.18■■□□□ 1.14
SYVN1-201ENST00000294256 MAP2P11137 1827 aaKnown RBP22.18■■□□□ 1.14
SYVN1-201ENST00000294256 ARXQ96QS3 562 aa22.18■■□□□ 1.14
SYVN1-201ENST00000294256 PLEKHG5O94827 1062 aa22.17■■□□□ 1.14
SYVN1-201ENST00000294256 MCM10Q7L590 875 aa22.17■■□□□ 1.14
SYVN1-201ENST00000294256 LTKP29376 864 aa22.16■■□□□ 1.14
SYVN1-201ENST00000294256 GNAI1P63096 354 aa22.16■■□□□ 1.14
SYVN1-201ENST00000294256 GSE1Q14687 1217 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms