RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 PLEKHF1Q96S99 279 aa18.17■□□□□ 0.5
NXF1-201ENST00000294172 TECPR2O15040 1411 aa18.17■□□□□ 0.5
NXF1-201ENST00000294172 ROBO2Q9HCK4 1378 aa18.17■□□□□ 0.5
NXF1-201ENST00000294172 NME9Q86XW9 330 aa18.17■□□□□ 0.5
NXF1-201ENST00000294172 ADAMTS13Q76LX8 1427 aa18.16■□□□□ 0.5
NXF1-201ENST00000294172 KIF20BQ96Q89 1820 aa18.16■□□□□ 0.5
NXF1-201ENST00000294172 TCERG1O14776 1098 aaKnown RBP18.16■□□□□ 0.5
NXF1-201ENST00000294172 POLKQ9UBT6 870 aa18.16■□□□□ 0.5
NXF1-201ENST00000294172 EID1Q9Y6B2 187 aa18.16■□□□□ 0.5
NXF1-201ENST00000294172 SKAP1Q86WV1 359 aa18.16■□□□□ 0.5
NXF1-201ENST00000294172 FRAT1Q92837 279 aaPredicted RBP18.15■□□□□ 0.5
NXF1-201ENST00000294172 MYH16Q9H6N6 1097 aa18.15■□□□□ 0.5
NXF1-201ENST00000294172 ZRANB1Q9UGI0 708 aa18.15■□□□□ 0.5
NXF1-201ENST00000294172 CPSF1Q10570 1443 aaKnown RBP18.15■□□□□ 0.5
NXF1-201ENST00000294172 TMPOP42166 694 aaKnown RBP18.15■□□□□ 0.5
NXF1-201ENST00000294172 PNPLA6Q8IY17 1366 aa18.14■□□□□ 0.5
NXF1-201ENST00000294172 PLEKHG1Q9ULL1 1385 aa18.14■□□□□ 0.5
NXF1-201ENST00000294172 NUTM2FA1L443 756 aa18.14■□□□□ 0.49
NXF1-201ENST00000294172 EDC4Q6P2E9 1401 aaKnown RBP18.14■□□□□ 0.49
NXF1-201ENST00000294172 RARSP54136 660 aaKnown RBP18.14■□□□□ 0.49
NXF1-201ENST00000294172 KNDC1Q76NI1 1749 aa18.13■□□□□ 0.49
NXF1-201ENST00000294172 NCBP3Q53F19 620 aaKnown RBP18.13■□□□□ 0.49
NXF1-201ENST00000294172 CPS1P31327 1500 aa18.13■□□□□ 0.49
NXF1-201ENST00000294172 BCL2L13Q9BXK5 485 aa18.12■□□□□ 0.49
NXF1-201ENST00000294172 PRR36Q9H6K5 1346 aa18.12■□□□□ 0.49
NXF1-201ENST00000294172 EMILIN1Q9Y6C2 1016 aa18.12■□□□□ 0.49
NXF1-201ENST00000294172 ADGRB2O60241 1585 aa18.12■□□□□ 0.49
NXF1-201ENST00000294172 KDM2BQ8NHM5 1336 aa18.12■□□□□ 0.49
NXF1-201ENST00000294172 RIPK4P57078 832 aa18.11■□□□□ 0.49
NXF1-201ENST00000294172 CENPQQ7L2Z9 268 aaPredicted RBP18.11■□□□□ 0.49
NXF1-201ENST00000294172 PANK1Q8TE04 598 aa18.11■□□□□ 0.49
NXF1-201ENST00000294172 TSR2Q969E8 191 aaKnown RBP18.11■□□□□ 0.49
NXF1-201ENST00000294172 PNNQ9H307 717 aaKnown RBP18.11■□□□□ 0.49
NXF1-201ENST00000294172 PDE3AQ14432 1141 aa18.11■□□□□ 0.49
NXF1-201ENST00000294172 COG3Q96JB2 828 aa18.11■□□□□ 0.49
NXF1-201ENST00000294172 TRIM35Q9UPQ4 493 aa18.11■□□□□ 0.49
NXF1-201ENST00000294172 COG6Q9Y2V7 657 aa18.1■□□□□ 0.49
NXF1-201ENST00000294172 C3P01024 1663 aa18.09■□□□□ 0.49
NXF1-201ENST00000294172 FCHSD2O94868 740 aa18.09■□□□□ 0.49
NXF1-201ENST00000294172 CDC42BPGQ6DT37 1551 aa18.09■□□□□ 0.49
NXF1-201ENST00000294172 ZNF692Q9BU19 519 aaPredicted RBP18.09■□□□□ 0.49
NXF1-201ENST00000294172 HMOX1P09601 288 aa18.08■□□□□ 0.48
NXF1-201ENST00000294172 MS4A1P11836 297 aa18.08■□□□□ 0.48
NXF1-201ENST00000294172 PDE4AP27815 886 aa18.08■□□□□ 0.48
NXF1-201ENST00000294172 PRKAR2BP31323 418 aa18.08■□□□□ 0.48
NXF1-201ENST00000294172 ERICH6Q7L0X2 663 aa18.08■□□□□ 0.48
NXF1-201ENST00000294172 AMOTL2Q9Y2J4 779 aa18.08■□□□□ 0.48
NXF1-201ENST00000294172 RRS1Q15050 365 aaKnown RBP18.07■□□□□ 0.48
NXF1-201ENST00000294172 NEFMP07197 916 aa18.07■□□□□ 0.48
NXF1-201ENST00000294172 THEMISQ8N1K5 641 aaPredicted RBP18.07■□□□□ 0.48
NXF1-201ENST00000294172 PTPRUQ92729 1446 aa18.07■□□□□ 0.48
NXF1-201ENST00000294172 MAP2P11137 1827 aaKnown RBP18.06■□□□□ 0.48
NXF1-201ENST00000294172 RSPH6AQ9H0K4 717 aa18.06■□□□□ 0.48
NXF1-201ENST00000294172 FER1L4A9Z1Z3 1794 aa18.05■□□□□ 0.48
NXF1-201ENST00000294172 EXOSC9Q06265 439 aaKnown RBP18.05■□□□□ 0.48
NXF1-201ENST00000294172 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.05■□□□□ 0.48
NXF1-201ENST00000294172 ANP32AP39687 249 aaKnown RBP18.05■□□□□ 0.48
NXF1-201ENST00000294172 TNNQ9UQP3 1299 aa18.05■□□□□ 0.48
NXF1-201ENST00000294172 ACEP12821 1306 aa18.05■□□□□ 0.48
NXF1-201ENST00000294172 IL13P35225 146 aa18.04■□□□□ 0.48
NXF1-201ENST00000294172 CLUAP1Q96AJ1 413 aa18.04■□□□□ 0.48
NXF1-201ENST00000294172 TBX22Q9Y458 520 aa18.04■□□□□ 0.48
NXF1-201ENST00000294172 AATKQ6ZMQ8 1374 aa18.03■□□□□ 0.48
NXF1-201ENST00000294172 PHACTR3Q96KR7 559 aa18.03■□□□□ 0.48
NXF1-201ENST00000294172 BACH2Q9BYV9 841 aa18.03■□□□□ 0.48
NXF1-201ENST00000294172 SLIT1O75093 1534 aa18.03■□□□□ 0.48
NXF1-201ENST00000294172 LRRC7Q96NW7 1537 aa18.03■□□□□ 0.48
NXF1-201ENST00000294172 RLBP1P12271 317 aa18.03■□□□□ 0.48
NXF1-201ENST00000294172 MON2Q7Z3U7 1717 aa18.02■□□□□ 0.48
NXF1-201ENST00000294172 TTC21BQ7Z4L5 1316 aa18.02■□□□□ 0.48
NXF1-201ENST00000294172 NPM2Q86SE8 214 aaKnown RBP18.02■□□□□ 0.48
NXF1-201ENST00000294172 ARHGAP23Q9P227 1491 aa18.02■□□□□ 0.47
NXF1-201ENST00000294172 IL16Q14005 1332 aa18.02■□□□□ 0.47
NXF1-201ENST00000294172 ITSN1Q15811 1721 aa18.01■□□□□ 0.47
NXF1-201ENST00000294172 PLEKHG3A1L390 1219 aa18.01■□□□□ 0.47
NXF1-201ENST00000294172 SMC4Q9NTJ3 1288 aa18.01■□□□□ 0.47
NXF1-201ENST00000294172 IGHDP01880 384 aa18■□□□□ 0.47
NXF1-201ENST00000294172 PMFBP1Q8TBY8 1022 aa18■□□□□ 0.47
NXF1-201ENST00000294172 LAS1LQ9Y4W2 734 aaKnown RBP18■□□□□ 0.47
NXF1-201ENST00000294172 CDK12Q9NYV4 1490 aaPredicted RBP18■□□□□ 0.47
NXF1-201ENST00000294172 CT47B1P0C2W7 299 aaPredicted RBP18■□□□□ 0.47
NXF1-201ENST00000294172 AKAP12Q02952 1782 aa18■□□□□ 0.47
NXF1-201ENST00000294172 RGS3P49796 1198 aa17.99■□□□□ 0.47
NXF1-201ENST00000294172 NFE2L2Q16236 605 aa17.99■□□□□ 0.47
NXF1-201ENST00000294172 SOX12O15370 315 aa17.98■□□□□ 0.47
NXF1-201ENST00000294172 ZKSCAN2Q63HK3 967 aa17.98■□□□□ 0.47
NXF1-201ENST00000294172 FTSJ3Q8IY81 847 aaKnown RBP17.98■□□□□ 0.47
NXF1-201ENST00000294172 SSH1Q8WYL5 1049 aa17.98■□□□□ 0.47
NXF1-201ENST00000294172 THUMPD2Q9BTF0 503 aaKnown RBP17.98■□□□□ 0.47
NXF1-201ENST00000294172 IPO9Q96P70 1041 aaKnown RBP17.97■□□□□ 0.47
NXF1-201ENST00000294172 USP6P35125 1406 aa17.96■□□□□ 0.47
NXF1-201ENST00000294172 NGDNQ8NEJ9 315 aaKnown RBP17.95■□□□□ 0.46
NXF1-201ENST00000294172 DZIP1LQ8IYY4 767 aaKnown RBP17.95■□□□□ 0.46
NXF1-201ENST00000294172 NOP58Q9Y2X3 529 aaKnown RBP17.95■□□□□ 0.46
NXF1-201ENST00000294172 PTCH1Q13635 1447 aa17.95■□□□□ 0.46
NXF1-201ENST00000294172 KCNA6P17658 529 aa17.94■□□□□ 0.46
NXF1-201ENST00000294172 TOPAZ1Q8N9V7 1692 aa17.93■□□□□ 0.46
NXF1-201ENST00000294172 MVPQ14764 893 aaKnown RBP17.93■□□□□ 0.46
NXF1-201ENST00000294172 NOB1Q9ULX3 412 aaKnown RBP17.93■□□□□ 0.46
NXF1-201ENST00000294172 PCDHB15Q9Y5E8 787 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms