RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 WAPLQ7Z5K2 1190 aa15.34■□□□□ 0.05
CLPB-201ENST00000294053 PANK1Q8TE04 598 aa15.33■□□□□ 0.04
CLPB-201ENST00000294053 PTPRMP28827 1452 aa15.32■□□□□ 0.04
CLPB-201ENST00000294053 RUNDC1Q96C34 613 aa15.32■□□□□ 0.04
CLPB-201ENST00000294053 AGLP35573 1532 aa15.31■□□□□ 0.04
CLPB-201ENST00000294053 TRIM44Q96DX7 344 aaPredicted RBP15.31■□□□□ 0.04
CLPB-201ENST00000294053 COG6Q9Y2V7 657 aa15.31■□□□□ 0.04
CLPB-201ENST00000294053 U2SURPO15042 1029 aaKnown RBP15.31■□□□□ 0.04
CLPB-201ENST00000294053 IGHDP01880 384 aa15.31■□□□□ 0.04
CLPB-201ENST00000294053 ARHGEF40Q8TER5 1519 aa15.31■□□□□ 0.04
CLPB-201ENST00000294053 YTHDC2Q9H6S0 1430 aaKnown RBP15.31■□□□□ 0.04
CLPB-201ENST00000294053 CABP1Q9NZU7 370 aa15.3■□□□□ 0.04
CLPB-201ENST00000294053 FYB1O15117 783 aa15.29■□□□□ 0.04
CLPB-201ENST00000294053 CDK19Q9BWU1 502 aa15.29■□□□□ 0.04
CLPB-201ENST00000294053 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.28■□□□□ 0.04
CLPB-201ENST00000294053 MYH16Q9H6N6 1097 aa15.28■□□□□ 0.04
CLPB-201ENST00000294053 TSR2Q969E8 191 aaKnown RBP15.28■□□□□ 0.04
CLPB-201ENST00000294053 CLUAP1Q96AJ1 413 aa15.28■□□□□ 0.04
CLPB-201ENST00000294053 IQSEC2Q5JU85 1478 aa15.28■□□□□ 0.04
CLPB-201ENST00000294053 CD163L1Q9NR16 1453 aa15.27■□□□□ 0.04
CLPB-201ENST00000294053 CFAP53Q96M91 514 aa15.27■□□□□ 0.04
CLPB-201ENST00000294053 RLBP1P12271 317 aa15.27■□□□□ 0.03
CLPB-201ENST00000294053 NCKAP5LQ9HCH0 1330 aa15.27■□□□□ 0.03
CLPB-201ENST00000294053 CLTCQ00610 1675 aaKnown RBP15.27■□□□□ 0.03
CLPB-201ENST00000294053 ALKQ9UM73 1620 aa15.26■□□□□ 0.03
CLPB-201ENST00000294053 ZFYVE9O95405 1425 aa15.26■□□□□ 0.03
CLPB-201ENST00000294053 ABCC11Q96J66 1382 aa15.26■□□□□ 0.03
CLPB-201ENST00000294053 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
CLPB-201ENST00000294053 USP32Q8NFA0 1604 aa15.25■□□□□ 0.03
CLPB-201ENST00000294053 RARSP54136 660 aaKnown RBP15.25■□□□□ 0.03
CLPB-201ENST00000294053 PHF23Q9BUL5 403 aaPredicted RBP15.24■□□□□ 0.03
CLPB-201ENST00000294053 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
CLPB-201ENST00000294053 MFAP1P55081 439 aaKnown RBP15.24■□□□□ 0.03
CLPB-201ENST00000294053 TRAK2O60296 914 aa15.24■□□□□ 0.03
CLPB-201ENST00000294053 TBC1D2Q9BYX2 928 aa15.23■□□□□ 0.03
CLPB-201ENST00000294053 ZBTB7CA1YPR0 619 aa15.23■□□□□ 0.03
CLPB-201ENST00000294053 RBM10P98175 930 aaKnown RBP15.23■□□□□ 0.03
CLPB-201ENST00000294053 RRP9O43818 475 aaKnown RBP15.22■□□□□ 0.03
CLPB-201ENST00000294053 ZRANB1Q9UGI0 708 aa15.22■□□□□ 0.03
CLPB-201ENST00000294053 A2ML1A8K2U0 1454 aa15.22■□□□□ 0.03
CLPB-201ENST00000294053 NLRP1Q9C000 1473 aa15.22■□□□□ 0.03
CLPB-201ENST00000294053 MCM4P33991 863 aa15.22■□□□□ 0.03
CLPB-201ENST00000294053 TXNDC2Q86VQ3 553 aa15.22■□□□□ 0.03
CLPB-201ENST00000294053 TERF2IPQ9NYB0 399 aa15.22■□□□□ 0.03
CLPB-201ENST00000294053 PUS7Q96PZ0 661 aaKnown RBP15.21■□□□□ 0.03
CLPB-201ENST00000294053 PLEKHF1Q96S99 279 aa15.21■□□□□ 0.03
CLPB-201ENST00000294053 PLPPR3Q6T4P5 718 aa15.21■□□□□ 0.02
CLPB-201ENST00000294053 ATAD2Q6PL18 1390 aa15.2■□□□□ 0.02
CLPB-201ENST00000294053 ESPNB1AK53 854 aa15.2■□□□□ 0.02
CLPB-201ENST00000294053 CLCN1P35523 988 aa15.2■□□□□ 0.02
CLPB-201ENST00000294053 RIMS2Q9UQ26 1411 aa15.2■□□□□ 0.02
CLPB-201ENST00000294053 NSD2O96028 1365 aa15.2■□□□□ 0.02
CLPB-201ENST00000294053 USP19O94966 1318 aa15.2■□□□□ 0.02
CLPB-201ENST00000294053 A0A0U1RQG5 324 aaPredicted RBP15.2■□□□□ 0.02
CLPB-201ENST00000294053 METP08581 1390 aa15.2■□□□□ 0.02
CLPB-201ENST00000294053 TRIM35Q9UPQ4 493 aa15.19■□□□□ 0.02
CLPB-201ENST00000294053 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
CLPB-201ENST00000294053 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
CLPB-201ENST00000294053 TMPOP42166 694 aaKnown RBP15.19■□□□□ 0.02
CLPB-201ENST00000294053 WDR63Q8IWG1 891 aa15.19■□□□□ 0.02
CLPB-201ENST00000294053 HDGFL2Q7Z4V5 671 aaPredicted RBP15.18■□□□□ 0.02
CLPB-201ENST00000294053 PCDHB15Q9Y5E8 787 aa15.18■□□□□ 0.02
CLPB-201ENST00000294053 COL3A1P02461 1466 aaPredicted RBP15.18■□□□□ 0.02
CLPB-201ENST00000294053 NUTM2FA1L443 756 aa15.18■□□□□ 0.02
CLPB-201ENST00000294053 NGEFQ8N5V2 710 aa15.18■□□□□ 0.02
CLPB-201ENST00000294053 EXOSC9Q06265 439 aaKnown RBP15.17■□□□□ 0.02
CLPB-201ENST00000294053 PDE3AQ14432 1141 aa15.17■□□□□ 0.02
CLPB-201ENST00000294053 PLEKHG5O94827 1062 aa15.17■□□□□ 0.02
CLPB-201ENST00000294053 HMOX1P09601 288 aa15.17■□□□□ 0.02
CLPB-201ENST00000294053 PODXL2Q9NZ53 605 aa15.17■□□□□ 0.02
CLPB-201ENST00000294053 NME9Q86XW9 330 aa15.17■□□□□ 0.02
CLPB-201ENST00000294053 GRPEL1Q9HAV7 217 aa15.17■□□□□ 0.02
CLPB-201ENST00000294053 EMILIN1Q9Y6C2 1016 aa15.17■□□□□ 0.02
CLPB-201ENST00000294053 DIAPH1O60610 1272 aaKnown RBP15.15■□□□□ 0.02
CLPB-201ENST00000294053 RIPK4P57078 832 aa15.15■□□□□ 0.02
CLPB-201ENST00000294053 CCDC27Q2M243 656 aa15.15■□□□□ 0.02
CLPB-201ENST00000294053 THUMPD2Q9BTF0 503 aaKnown RBP15.15■□□□□ 0.02
CLPB-201ENST00000294053 FAM13BQ9NYF5 915 aa15.15■□□□□ 0.02
CLPB-201ENST00000294053 MAPK8IP3Q9UPT6 1336 aa15.15■□□□□ 0.02
CLPB-201ENST00000294053 MRE11P49959 708 aa15.15■□□□□ 0.02
CLPB-201ENST00000294053 POLKQ9UBT6 870 aa15.15■□□□□ 0.02
CLPB-201ENST00000294053 ZMYM3Q14202 1370 aa15.14■□□□□ 0.01
CLPB-201ENST00000294053 NINLQ9Y2I6 1382 aa15.14■□□□□ 0.01
CLPB-201ENST00000294053 ESF1Q9H501 851 aaKnown RBP15.14■□□□□ 0.01
CLPB-201ENST00000294053 ADGRB2O60241 1585 aa15.14■□□□□ 0.01
CLPB-201ENST00000294053 ERBB4Q15303 1308 aa15.14■□□□□ 0.01
CLPB-201ENST00000294053 SPATA31D1Q6ZQQ2 1576 aa15.14■□□□□ 0.01
CLPB-201ENST00000294053 NCLP19338 710 aaKnown RBP15.14■□□□□ 0.01
CLPB-201ENST00000294053 PHACTR3Q96KR7 559 aa15.13■□□□□ 0.01
CLPB-201ENST00000294053 SETD1AO15047 1707 aaKnown RBP15.13■□□□□ 0.01
CLPB-201ENST00000294053 CEBPAP49715 358 aaPredicted RBP15.13■□□□□ 0.01
CLPB-201ENST00000294053 RRS1Q15050 365 aaKnown RBP15.13■□□□□ 0.01
CLPB-201ENST00000294053 PDZRN3Q9UPQ7 1066 aa15.13■□□□□ 0.01
CLPB-201ENST00000294053 PRKAR2BP31323 418 aa15.13■□□□□ 0.01
CLPB-201ENST00000294053 ANTXR1Q9H6X2 564 aa15.13■□□□□ 0.01
CLPB-201ENST00000294053 KIAA1211Q6ZU35 1233 aa15.12■□□□□ 0.01
CLPB-201ENST00000294053 SSH1Q8WYL5 1049 aa15.12■□□□□ 0.01
CLPB-201ENST00000294053 SMC4Q9NTJ3 1288 aa15.12■□□□□ 0.01
CLPB-201ENST00000294053 NRXN3Q9Y4C0 1643 aa15.12■□□□□ 0.01
CLPB-201ENST00000294053 CHMP5Q9NZZ3 219 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms