RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 SOS2Q07890 1332 aaPredicted RBP24.33■■□□□ 1.49
CCDC78-201ENST00000293889 MON2Q7Z3U7 1717 aa24.31■■□□□ 1.48
CCDC78-201ENST00000293889 AMER1Q5JTC6 1135 aaPredicted RBP24.31■■□□□ 1.48
CCDC78-201ENST00000293889 USP6P35125 1406 aa24.3■■□□□ 1.48
CCDC78-201ENST00000293889 TRPM3Q9HCF6 1732 aaPredicted RBP24.3■■□□□ 1.48
CCDC78-201ENST00000293889 EDC4Q6P2E9 1401 aaKnown RBP24.3■■□□□ 1.48
CCDC78-201ENST00000293889 CNGB1Q14028 1251 aaPredicted RBP24.29■■□□□ 1.48
CCDC78-201ENST00000293889 KRT28Q7Z3Y7 464 aa24.28■■□□□ 1.48
CCDC78-201ENST00000293889 SHPRHQ149N8 1683 aa24.28■■□□□ 1.48
CCDC78-201ENST00000293889 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.28■■□□□ 1.48
CCDC78-201ENST00000293889 CGNL1Q0VF96 1302 aa24.27■■□□□ 1.48
CCDC78-201ENST00000293889 SSH2Q76I76 1423 aa24.27■■□□□ 1.48
CCDC78-201ENST00000293889 PSME1Q06323 249 aa24.27■■□□□ 1.48
CCDC78-201ENST00000293889 CC2D1BQ5T0F9 858 aaKnown RBP24.27■■□□□ 1.48
CCDC78-201ENST00000293889 NPC1L1Q9UHC9 1359 aa24.26■■□□□ 1.47
CCDC78-201ENST00000293889 ANP32CO43423 234 aa24.25■■□□□ 1.47
CCDC78-201ENST00000293889 LRRC59Q96AG4 307 aaKnown RBP24.25■■□□□ 1.47
CCDC78-201ENST00000293889 TTC21BQ7Z4L5 1316 aa24.25■■□□□ 1.47
CCDC78-201ENST00000293889 NRKQ7Z2Y5 1582 aa24.25■■□□□ 1.47
CCDC78-201ENST00000293889 JCADQ9P266 1359 aa24.23■■□□□ 1.47
CCDC78-201ENST00000293889 ALS2Q96Q42 1657 aa24.23■■□□□ 1.47
CCDC78-201ENST00000293889 FYB1O15117 783 aa24.23■■□□□ 1.47
CCDC78-201ENST00000293889 PRKRIP1Q9H875 184 aaPredicted RBP24.22■■□□□ 1.47
CCDC78-201ENST00000293889 NME9Q86XW9 330 aa24.21■■□□□ 1.47
CCDC78-201ENST00000293889 SPATA31A3Q5VYP0 1347 aa24.21■■□□□ 1.47
CCDC78-201ENST00000293889 SBNO1A3KN83 1393 aa24.21■■□□□ 1.47
CCDC78-201ENST00000293889 BRD4O60885 1362 aaPredicted RBP24.21■■□□□ 1.47
CCDC78-201ENST00000293889 PNPLA6Q8IY17 1366 aa24.21■■□□□ 1.47
CCDC78-201ENST00000293889 TNS3Q68CZ2 1445 aa24.21■■□□□ 1.47
CCDC78-201ENST00000293889 MIER1Q8N108 512 aa24.21■■□□□ 1.47
CCDC78-201ENST00000293889 GGNBP2Q9H3C7 697 aa24.21■■□□□ 1.47
CCDC78-201ENST00000293889 COL22A1Q8NFW1 1626 aaPredicted RBP24.2■■□□□ 1.46
CCDC78-201ENST00000293889 NSD2O96028 1365 aa24.2■■□□□ 1.46
CCDC78-201ENST00000293889 TTC21AQ8NDW8 1320 aa24.2■■□□□ 1.46
CCDC78-201ENST00000293889 PAK3O75914 559 aaPredicted RBP24.19■■□□□ 1.46
CCDC78-201ENST00000293889 KIF20BQ96Q89 1820 aa24.18■■□□□ 1.46
CCDC78-201ENST00000293889 PARD3Q8TEW0 1356 aa24.18■■□□□ 1.46
CCDC78-201ENST00000293889 ZRANB1Q9UGI0 708 aa24.17■■□□□ 1.46
CCDC78-201ENST00000293889 RALBP1Q15311 655 aa24.17■■□□□ 1.46
CCDC78-201ENST00000293889 PELP1Q8IZL8 1130 aaKnown RBP24.17■■□□□ 1.46
CCDC78-201ENST00000293889 MORC1Q86VD1 984 aa24.15■■□□□ 1.46
CCDC78-201ENST00000293889 ABCA3Q99758 1704 aa24.14■■□□□ 1.45
CCDC78-201ENST00000293889 ABTB2Q8N961 1025 aa24.13■■□□□ 1.45
CCDC78-201ENST00000293889 PIK3C2AO00443 1686 aa24.13■■□□□ 1.45
CCDC78-201ENST00000293889 LMOD2Q6P5Q4 547 aa24.13■■□□□ 1.45
CCDC78-201ENST00000293889 LRP6O75581 1613 aa24.13■■□□□ 1.45
CCDC78-201ENST00000293889 ANKRD26Q9UPS8 1709 aa24.13■■□□□ 1.45
CCDC78-201ENST00000293889 CRYBG1Q9Y4K1 1723 aa24.13■■□□□ 1.45
CCDC78-201ENST00000293889 COG3Q96JB2 828 aa24.12■■□□□ 1.45
CCDC78-201ENST00000293889 ARHGEF10O15013 1369 aa24.12■■□□□ 1.45
CCDC78-201ENST00000293889 SPATA31A6Q5VVP1 1343 aa24.11■■□□□ 1.45
CCDC78-201ENST00000293889 NUTM2GQ5VZR2 741 aa24.11■■□□□ 1.45
CCDC78-201ENST00000293889 USP31Q70CQ4 1352 aa24.11■■□□□ 1.45
CCDC78-201ENST00000293889 MED1Q15648 1581 aaPredicted RBP24.1■■□□□ 1.45
CCDC78-201ENST00000293889 NLRP6P59044 892 aa24.1■■□□□ 1.45
CCDC78-201ENST00000293889 OVOS2A0A0J9YW53 1432 aa24.1■■□□□ 1.45
CCDC78-201ENST00000293889 OVOS2Q6IE36 1432 aa24.1■■□□□ 1.45
CCDC78-201ENST00000293889 TNNT2P45379 298 aaPredicted RBP24.1■■□□□ 1.45
CCDC78-201ENST00000293889 MARF1Q9Y4F3 1742 aaKnown RBP24.08■■□□□ 1.45
CCDC78-201ENST00000293889 NUTM2BA6NNL0 878 aaPredicted RBP24.08■■□□□ 1.45
CCDC78-201ENST00000293889 NUTM2EB1AL46 878 aaPredicted RBP24.08■■□□□ 1.45
CCDC78-201ENST00000293889 NUTM2AQ8IVF1 878 aaPredicted RBP24.08■■□□□ 1.45
CCDC78-201ENST00000293889 MYBBP1AQ9BQG0 1328 aaKnown RBP24.08■■□□□ 1.44
CCDC78-201ENST00000293889 CABLES1Q8TDN4 633 aa24.07■■□□□ 1.44
CCDC78-201ENST00000293889 PLEKHG5O94827 1062 aa24.06■■□□□ 1.44
CCDC78-201ENST00000293889 PPP2R1AP30153 589 aa24.06■■□□□ 1.44
CCDC78-201ENST00000293889 PHRF1Q9P1Y6 1649 aaKnown RBP24.06■■□□□ 1.44
CCDC78-201ENST00000293889 USP54Q70EL1 1684 aa24.05■■□□□ 1.44
CCDC78-201ENST00000293889 NLRP13Q86W25 1043 aa24.05■■□□□ 1.44
CCDC78-201ENST00000293889 FBLN1P23142 703 aa24.03■■□□□ 1.44
CCDC78-201ENST00000293889 CCER2I3L3R5 266 aa24.01■■□□□ 1.43
CCDC78-201ENST00000293889 SOX12O15370 315 aa24■■□□□ 1.43
CCDC78-201ENST00000293889 CCDC184Q52MB2 194 aa24■■□□□ 1.43
CCDC78-201ENST00000293889 AATKQ6ZMQ8 1374 aa23.99■■□□□ 1.43
CCDC78-201ENST00000293889 USP19O94966 1318 aa23.99■■□□□ 1.43
CCDC78-201ENST00000293889 ADAMTS2O95450 1211 aa23.99■■□□□ 1.43
CCDC78-201ENST00000293889 GTF3C3Q9Y5Q9 886 aa23.99■■□□□ 1.43
CCDC78-201ENST00000293889 SLIT3O75094 1523 aa23.98■■□□□ 1.43
CCDC78-201ENST00000293889 MTHFSP49914 203 aa23.97■■□□□ 1.43
CCDC78-201ENST00000293889 POLKQ9UBT6 870 aa23.97■■□□□ 1.43
CCDC78-201ENST00000293889 GCP02774 474 aa23.95■■□□□ 1.43
CCDC78-201ENST00000293889 HAP1P54257 671 aaPredicted RBP23.95■■□□□ 1.43
CCDC78-201ENST00000293889 RRS1Q15050 365 aaKnown RBP23.95■■□□□ 1.43
CCDC78-201ENST00000293889 MEX3CQ5U5Q3 659 aaKnown RBP23.95■■□□□ 1.43
CCDC78-201ENST00000293889 KCNH5Q8NCM2 988 aa23.95■■□□□ 1.42
CCDC78-201ENST00000293889 MRS2Q9HD23 443 aa23.94■■□□□ 1.42
CCDC78-201ENST00000293889 EMILIN1Q9Y6C2 1016 aa23.94■■□□□ 1.42
CCDC78-201ENST00000293889 MAP2P11137 1827 aaKnown RBP23.94■■□□□ 1.42
CCDC78-201ENST00000293889 NFAT5O94916 1531 aa23.94■■□□□ 1.42
CCDC78-201ENST00000293889 C8orf37Q96NL8 207 aa23.92■■□□□ 1.42
CCDC78-201ENST00000293889 PPM1GO15355 546 aaPredicted RBP23.92■■□□□ 1.42
CCDC78-201ENST00000293889 PLCH1Q4KWH8 1693 aa23.91■■□□□ 1.42
CCDC78-201ENST00000293889 MAP3K19Q56UN5 1328 aa23.91■■□□□ 1.42
CCDC78-201ENST00000293889 SMG6Q86US8 1419 aaKnown RBP23.91■■□□□ 1.42
CCDC78-201ENST00000293889 ZC3H6P61129 1189 aaKnown RBP23.89■■□□□ 1.42
CCDC78-201ENST00000293889 KIAA0232Q92628 1395 aa23.89■■□□□ 1.41
CCDC78-201ENST00000293889 COL14A1Q05707 1796 aaKnown RBP23.89■■□□□ 1.41
CCDC78-201ENST00000293889 FAM83GA6ND36 823 aa23.88■■□□□ 1.41
CCDC78-201ENST00000293889 NGLY1Q96IV0 654 aa23.88■■□□□ 1.41
CCDC78-201ENST00000293889 RGS17Q9UGC6 210 aaPredicted RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms