RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 SLC26A8Q96RN1 970 aa19.5■□□□□ 0.71
CCDC116-201ENST00000292779 GGNBP2Q9H3C7 697 aa19.5■□□□□ 0.71
CCDC116-201ENST00000292779 PANK1Q8TE04 598 aa19.49■□□□□ 0.71
CCDC116-201ENST00000292779 THEMISQ8N1K5 641 aaPredicted RBP19.49■□□□□ 0.71
CCDC116-201ENST00000292779 RARSP54136 660 aaKnown RBP19.48■□□□□ 0.71
CCDC116-201ENST00000292779 TERF2IPQ9NYB0 399 aa19.48■□□□□ 0.71
CCDC116-201ENST00000292779 COG6Q9Y2V7 657 aa19.48■□□□□ 0.71
CCDC116-201ENST00000292779 ANKRD26Q9UPS8 1709 aa19.47■□□□□ 0.71
CCDC116-201ENST00000292779 CD163L1Q9NR16 1453 aa19.47■□□□□ 0.71
CCDC116-201ENST00000292779 RGS3P49796 1198 aa19.47■□□□□ 0.71
CCDC116-201ENST00000292779 FAM161AQ3B820 660 aa19.47■□□□□ 0.71
CCDC116-201ENST00000292779 FRAT1Q92837 279 aaPredicted RBP19.47■□□□□ 0.71
CCDC116-201ENST00000292779 ADGRB2O60241 1585 aa19.47■□□□□ 0.71
CCDC116-201ENST00000292779 PLEKHG1Q9ULL1 1385 aa19.47■□□□□ 0.71
CCDC116-201ENST00000292779 IGHDP01880 384 aa19.46■□□□□ 0.71
CCDC116-201ENST00000292779 WAPLQ7Z5K2 1190 aa19.46■□□□□ 0.71
CCDC116-201ENST00000292779 FYB1O15117 783 aa19.46■□□□□ 0.71
CCDC116-201ENST00000292779 C8orf34Q49A92 452 aa19.46■□□□□ 0.71
CCDC116-201ENST00000292779 CDK19Q9BWU1 502 aa19.46■□□□□ 0.71
CCDC116-201ENST00000292779 MED14O60244 1454 aa19.46■□□□□ 0.71
CCDC116-201ENST00000292779 CLUAP1Q96AJ1 413 aa19.45■□□□□ 0.7
CCDC116-201ENST00000292779 HDGFP51858 240 aaKnown RBP19.45■□□□□ 0.7
CCDC116-201ENST00000292779 NCBP3Q53F19 620 aaKnown RBP19.44■□□□□ 0.7
CCDC116-201ENST00000292779 PTPRUQ92729 1446 aa19.44■□□□□ 0.7
CCDC116-201ENST00000292779 EID1Q9Y6B2 187 aa19.44■□□□□ 0.7
CCDC116-201ENST00000292779 COL3A1P02461 1466 aaPredicted RBP19.43■□□□□ 0.7
CCDC116-201ENST00000292779 DDRGK1Q96HY6 314 aa19.42■□□□□ 0.7
CCDC116-201ENST00000292779 MYH16Q9H6N6 1097 aa19.42■□□□□ 0.7
CCDC116-201ENST00000292779 CABP1Q9NZU7 370 aa19.42■□□□□ 0.7
CCDC116-201ENST00000292779 U2SURPO15042 1029 aaKnown RBP19.42■□□□□ 0.7
CCDC116-201ENST00000292779 DEKP35659 375 aaKnown RBP19.42■□□□□ 0.7
CCDC116-201ENST00000292779 BCL2L13Q9BXK5 485 aa19.42■□□□□ 0.7
CCDC116-201ENST00000292779 HDGFL2Q7Z4V5 671 aaPredicted RBP19.41■□□□□ 0.7
CCDC116-201ENST00000292779 TNNQ9UQP3 1299 aa19.41■□□□□ 0.7
CCDC116-201ENST00000292779 PLEKHF1Q96S99 279 aa19.4■□□□□ 0.7
CCDC116-201ENST00000292779 KIF20BQ96Q89 1820 aa19.4■□□□□ 0.7
CCDC116-201ENST00000292779 RLBP1P12271 317 aa19.4■□□□□ 0.7
CCDC116-201ENST00000292779 RTL5Q5HYW3 569 aaPredicted RBP19.39■□□□□ 0.69
CCDC116-201ENST00000292779 LAS1LQ9Y4W2 734 aaKnown RBP19.39■□□□□ 0.69
CCDC116-201ENST00000292779 ROBO2Q9HCK4 1378 aa19.38■□□□□ 0.69
CCDC116-201ENST00000292779 VIRMAQ69YN4 1812 aaKnown RBP19.38■□□□□ 0.69
CCDC116-201ENST00000292779 KNDC1Q76NI1 1749 aa19.37■□□□□ 0.69
CCDC116-201ENST00000292779 DLC1Q96QB1 1528 aa19.37■□□□□ 0.69
CCDC116-201ENST00000292779 TMPOP42166 694 aaKnown RBP19.37■□□□□ 0.69
CCDC116-201ENST00000292779 NCKAP5LQ9HCH0 1330 aa19.37■□□□□ 0.69
CCDC116-201ENST00000292779 TSR2Q969E8 191 aaKnown RBP19.36■□□□□ 0.69
CCDC116-201ENST00000292779 AAMPQ13685 434 aa19.35■□□□□ 0.69
CCDC116-201ENST00000292779 TRIM35Q9UPQ4 493 aa19.35■□□□□ 0.69
CCDC116-201ENST00000292779 MAPK8IP3Q9UPT6 1336 aa19.35■□□□□ 0.69
CCDC116-201ENST00000292779 ANKLE2Q86XL3 938 aa19.35■□□□□ 0.69
CCDC116-201ENST00000292779 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.35■□□□□ 0.69
CCDC116-201ENST00000292779 CPS1P31327 1500 aa19.34■□□□□ 0.69
CCDC116-201ENST00000292779 HSPA2P54652 639 aa19.34■□□□□ 0.69
CCDC116-201ENST00000292779 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.34■□□□□ 0.69
CCDC116-201ENST00000292779 TBX22Q9Y458 520 aa19.34■□□□□ 0.69
CCDC116-201ENST00000292779 PCDHB15Q9Y5E8 787 aa19.34■□□□□ 0.69
CCDC116-201ENST00000292779 TECPR2O15040 1411 aa19.34■□□□□ 0.69
CCDC116-201ENST00000292779 DIAPH1O60610 1272 aaKnown RBP19.33■□□□□ 0.68
CCDC116-201ENST00000292779 PMFBP1Q8TBY8 1022 aa19.33■□□□□ 0.68
CCDC116-201ENST00000292779 PNPLA6Q8IY17 1366 aa19.33■□□□□ 0.68
CCDC116-201ENST00000292779 AMOTL2Q9Y2J4 779 aa19.32■□□□□ 0.68
CCDC116-201ENST00000292779 CT47B1P0C2W7 299 aaPredicted RBP19.31■□□□□ 0.68
CCDC116-201ENST00000292779 FBLN1P23142 703 aa19.31■□□□□ 0.68
CCDC116-201ENST00000292779 EXOSC9Q06265 439 aaKnown RBP19.31■□□□□ 0.68
CCDC116-201ENST00000292779 BCL11AQ9H165 835 aa19.31■□□□□ 0.68
CCDC116-201ENST00000292779 SLC4A3P48751 1232 aa19.31■□□□□ 0.68
CCDC116-201ENST00000292779 ATP7BP35670 1465 aa19.31■□□□□ 0.68
CCDC116-201ENST00000292779 PPM1GO15355 546 aaPredicted RBP19.3■□□□□ 0.68
CCDC116-201ENST00000292779 ZKSCAN2Q63HK3 967 aa19.3■□□□□ 0.68
CCDC116-201ENST00000292779 XRN1Q8IZH2 1706 aaKnown RBP19.3■□□□□ 0.68
CCDC116-201ENST00000292779 NEFMP07197 916 aa19.3■□□□□ 0.68
CCDC116-201ENST00000292779 RIPK4P57078 832 aa19.3■□□□□ 0.68
CCDC116-201ENST00000292779 DIP2AQ14689 1571 aa19.29■□□□□ 0.68
CCDC116-201ENST00000292779 WASLO00401 505 aaPredicted RBP19.29■□□□□ 0.68
CCDC116-201ENST00000292779 MVPQ14764 893 aaKnown RBP19.29■□□□□ 0.68
CCDC116-201ENST00000292779 CHD2O14647 1828 aaKnown RBP19.28■□□□□ 0.68
CCDC116-201ENST00000292779 MAP2P11137 1827 aaKnown RBP19.28■□□□□ 0.68
CCDC116-201ENST00000292779 IL16Q14005 1332 aa19.28■□□□□ 0.68
CCDC116-201ENST00000292779 KCNA6P17658 529 aa19.28■□□□□ 0.68
CCDC116-201ENST00000292779 RBM33Q96EV2 1170 aaKnown RBP19.28■□□□□ 0.68
CCDC116-201ENST00000292779 SMC4Q9NTJ3 1288 aa19.28■□□□□ 0.68
CCDC116-201ENST00000292779 FAM135BQ49AJ0 1406 aa19.28■□□□□ 0.68
CCDC116-201ENST00000292779 FTSJ3Q8IY81 847 aaKnown RBP19.27■□□□□ 0.68
CCDC116-201ENST00000292779 DZIP1LQ8IYY4 767 aaKnown RBP19.27■□□□□ 0.68
CCDC116-201ENST00000292779 PNNQ9H307 717 aaKnown RBP19.27■□□□□ 0.68
CCDC116-201ENST00000292779 POLKQ9UBT6 870 aa19.27■□□□□ 0.68
CCDC116-201ENST00000292779 DAXXQ9UER7 740 aaPredicted RBP19.27■□□□□ 0.68
CCDC116-201ENST00000292779 NPHP4O75161 1426 aaPredicted RBP19.27■□□□□ 0.68
CCDC116-201ENST00000292779 CDC42BPGQ6DT37 1551 aa19.27■□□□□ 0.68
CCDC116-201ENST00000292779 LRRC7Q96NW7 1537 aa19.27■□□□□ 0.67
CCDC116-201ENST00000292779 SSH1Q8WYL5 1049 aa19.26■□□□□ 0.67
CCDC116-201ENST00000292779 PPIP5K1Q6PFW1 1433 aa19.26■□□□□ 0.67
CCDC116-201ENST00000292779 USP35Q9P2H5 1018 aa19.26■□□□□ 0.67
CCDC116-201ENST00000292779 CPSF1Q10570 1443 aaKnown RBP19.26■□□□□ 0.67
CCDC116-201ENST00000292779 LMTK3Q96Q04 1460 aa19.25■□□□□ 0.67
CCDC116-201ENST00000292779 RWDD1Q9H446 243 aaPredicted RBP19.25■□□□□ 0.67
CCDC116-201ENST00000292779 FCHSD2O94868 740 aa19.25■□□□□ 0.67
CCDC116-201ENST00000292779 SIRT1Q96EB6 747 aa19.25■□□□□ 0.67
CCDC116-201ENST00000292779 PDZRN3Q9UPQ7 1066 aa19.25■□□□□ 0.67
CCDC116-201ENST00000292779 USP19O94966 1318 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms