RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 COL14A1Q05707 1796 aaKnown RBP12.92□□□□□ -0.34
TFF1-201ENST00000291527 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
TFF1-201ENST00000291527 CHRNA2Q15822 529 aa12.92□□□□□ -0.34
TFF1-201ENST00000291527 NGDNQ8NEJ9 315 aaKnown RBP12.92□□□□□ -0.34
TFF1-201ENST00000291527 TOPAZ1Q8N9V7 1692 aa12.92□□□□□ -0.34
TFF1-201ENST00000291527 PHRF1Q9P1Y6 1649 aaKnown RBP12.91□□□□□ -0.34
TFF1-201ENST00000291527 HRCP23327 699 aa12.91□□□□□ -0.34
TFF1-201ENST00000291527 BLMP54132 1417 aaPredicted RBP12.9□□□□□ -0.34
TFF1-201ENST00000291527 KRT27Q7Z3Y8 459 aa12.9□□□□□ -0.34
TFF1-201ENST00000291527 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.34
TFF1-201ENST00000291527 ITSN1Q15811 1721 aa12.9□□□□□ -0.34
TFF1-201ENST00000291527 ZC3H6P61129 1189 aaKnown RBP12.89□□□□□ -0.35
TFF1-201ENST00000291527 ZRANB1Q9UGI0 708 aa12.89□□□□□ -0.35
TFF1-201ENST00000291527 ACEP12821 1306 aa12.88□□□□□ -0.35
TFF1-201ENST00000291527 SPATA31A5Q5VU36 1347 aa12.88□□□□□ -0.35
TFF1-201ENST00000291527 SPATA31A7Q8IWB4 1347 aa12.88□□□□□ -0.35
TFF1-201ENST00000291527 KIAA1210Q9ULL0 1709 aa12.88□□□□□ -0.35
TFF1-201ENST00000291527 CCDC125Q86Z20 511 aa12.88□□□□□ -0.35
TFF1-201ENST00000291527 KIAA0232Q92628 1395 aa12.88□□□□□ -0.35
TFF1-201ENST00000291527 THSD7AQ9UPZ6 1657 aa12.88□□□□□ -0.35
TFF1-201ENST00000291527 A0A0G2JS52 829 aa12.87□□□□□ -0.35
TFF1-201ENST00000291527 MYT1Q01538 1121 aa12.87□□□□□ -0.35
TFF1-201ENST00000291527 NBPF8Q3BBV2 869 aa12.87□□□□□ -0.35
TFF1-201ENST00000291527 SIN3AQ96ST3 1273 aa12.87□□□□□ -0.35
TFF1-201ENST00000291527 PSDA5PKW4 1024 aaPredicted RBP12.86□□□□□ -0.35
TFF1-201ENST00000291527 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
TFF1-201ENST00000291527 TNS1Q9HBL0 1735 aaKnown RBP12.85□□□□□ -0.35
TFF1-201ENST00000291527 POLR3AO14802 1390 aaPredicted RBP12.85□□□□□ -0.35
TFF1-201ENST00000291527 PRDM11Q9NQV5 511 aa12.85□□□□□ -0.35
TFF1-201ENST00000291527 STRN4Q9NRL3 753 aa12.85□□□□□ -0.35
TFF1-201ENST00000291527 CAMTA1Q9Y6Y1 1673 aa12.85□□□□□ -0.35
TFF1-201ENST00000291527 QRICH2Q9H0J4 1663 aa12.84□□□□□ -0.35
TFF1-201ENST00000291527 PLEKHG3A1L390 1219 aa12.84□□□□□ -0.35
TFF1-201ENST00000291527 EN1Q05925 392 aaPredicted RBP12.84□□□□□ -0.35
TFF1-201ENST00000291527 NRKQ7Z2Y5 1582 aa12.84□□□□□ -0.35
TFF1-201ENST00000291527 SPATA31A1Q5TZJ5 1347 aa12.84□□□□□ -0.35
TFF1-201ENST00000291527 EIF3AQ14152 1382 aaKnown RBP12.83□□□□□ -0.36
TFF1-201ENST00000291527 L3MBTL2Q969R5 705 aa12.83□□□□□ -0.36
TFF1-201ENST00000291527 STAC3Q96MF2 364 aa12.83□□□□□ -0.36
TFF1-201ENST00000291527 LMO7Q8WWI1 1683 aa12.83□□□□□ -0.36
TFF1-201ENST00000291527 LARP1Q6PKG0 1096 aaKnown RBP12.82□□□□□ -0.36
TFF1-201ENST00000291527 USP35Q9P2H5 1018 aa12.82□□□□□ -0.36
TFF1-201ENST00000291527 CCDC61Q9Y6R9 512 aa12.82□□□□□ -0.36
TFF1-201ENST00000291527 RGPD1P0DJD0 1748 aa12.82□□□□□ -0.36
TFF1-201ENST00000291527 RGPD5Q99666 1765 aa12.81□□□□□ -0.36
TFF1-201ENST00000291527 PPIP5K1Q6PFW1 1433 aa12.8□□□□□ -0.36
TFF1-201ENST00000291527 EZH2Q15910 746 aaKnown RBP12.8□□□□□ -0.36
TFF1-201ENST00000291527 ABTB2Q8N961 1025 aa12.8□□□□□ -0.36
TFF1-201ENST00000291527 CABP1Q9NZU7 370 aa12.8□□□□□ -0.36
TFF1-201ENST00000291527 USP19O94966 1318 aa12.8□□□□□ -0.36
TFF1-201ENST00000291527 TRPM1Q7Z4N2 1603 aa12.8□□□□□ -0.36
TFF1-201ENST00000291527 TRIM37O94972 964 aa12.79□□□□□ -0.36
TFF1-201ENST00000291527 SRPK2P78362 688 aaKnown RBP12.79□□□□□ -0.36
TFF1-201ENST00000291527 SF3B2Q13435 895 aaKnown RBP12.79□□□□□ -0.36
TFF1-201ENST00000291527 NEUROD1Q13562 356 aa12.79□□□□□ -0.36
TFF1-201ENST00000291527 CENPJQ9HC77 1338 aaPredicted RBP12.79□□□□□ -0.36
TFF1-201ENST00000291527 COL18A1P39060 1754 aa12.79□□□□□ -0.36
TFF1-201ENST00000291527 SSH2Q76I76 1423 aa12.79□□□□□ -0.36
TFF1-201ENST00000291527 PIK3C2AO00443 1686 aa12.78□□□□□ -0.36
TFF1-201ENST00000291527 ZBTB7CA1YPR0 619 aa12.77□□□□□ -0.37
TFF1-201ENST00000291527 GCP02774 474 aa12.77□□□□□ -0.37
TFF1-201ENST00000291527 BAG6P46379 1132 aa12.76□□□□□ -0.37
TFF1-201ENST00000291527 EVA1CP58658 441 aa12.76□□□□□ -0.37
TFF1-201ENST00000291527 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
TFF1-201ENST00000291527 PTF1AQ7RTS3 328 aa12.76□□□□□ -0.37
TFF1-201ENST00000291527 CAMKK2Q96RR4 588 aa12.76□□□□□ -0.37
TFF1-201ENST00000291527 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
TFF1-201ENST00000291527 LRP5O75197 1615 aa12.75□□□□□ -0.37
TFF1-201ENST00000291527 CPDO75976 1380 aa12.75□□□□□ -0.37
TFF1-201ENST00000291527 USP6P35125 1406 aa12.75□□□□□ -0.37
TFF1-201ENST00000291527 AKAP12Q02952 1782 aa12.75□□□□□ -0.37
TFF1-201ENST00000291527 SBF2Q86WG5 1849 aa12.74□□□□□ -0.37
TFF1-201ENST00000291527 COL5A2P05997 1499 aaPredicted RBP12.74□□□□□ -0.37
TFF1-201ENST00000291527 NUP188Q5SRE5 1749 aa12.74□□□□□ -0.37
TFF1-201ENST00000291527 SLIT3O75094 1523 aa12.73□□□□□ -0.37
TFF1-201ENST00000291527 APBA3O96018 575 aa12.73□□□□□ -0.37
TFF1-201ENST00000291527 NLRP6P59044 892 aa12.73□□□□□ -0.37
TFF1-201ENST00000291527 BARGINQ6ZT62 677 aa12.73□□□□□ -0.37
TFF1-201ENST00000291527 PEAK1Q9H792 1746 aa12.73□□□□□ -0.37
TFF1-201ENST00000291527 RREB1Q92766 1687 aa12.73□□□□□ -0.37
TFF1-201ENST00000291527 DISP2A7MBM2 1401 aa12.72□□□□□ -0.37
TFF1-201ENST00000291527 PARP4Q9UKK3 1724 aaKnown RBP12.72□□□□□ -0.37
TFF1-201ENST00000291527 NLRP13Q86W25 1043 aa12.72□□□□□ -0.37
TFF1-201ENST00000291527 TCP11L2Q8N4U5 519 aa12.72□□□□□ -0.37
TFF1-201ENST00000291527 SOX12O15370 315 aa12.71□□□□□ -0.37
TFF1-201ENST00000291527 FAM196AQ6ZSG2 479 aa12.71□□□□□ -0.37
TFF1-201ENST00000291527 WNK3Q9BYP7 1800 aa12.71□□□□□ -0.38
TFF1-201ENST00000291527 TTC21BQ7Z4L5 1316 aa12.7□□□□□ -0.38
TFF1-201ENST00000291527 LRRC37A3O60309 1634 aa12.7□□□□□ -0.38
TFF1-201ENST00000291527 PDE3BQ13370 1112 aa12.69□□□□□ -0.38
TFF1-201ENST00000291527 ROCK2O75116 1388 aaKnown RBP12.69□□□□□ -0.38
TFF1-201ENST00000291527 AATKQ6ZMQ8 1374 aa12.68□□□□□ -0.38
TFF1-201ENST00000291527 EVC2Q86UK5 1308 aa12.67□□□□□ -0.38
TFF1-201ENST00000291527 CD163L1Q9NR16 1453 aa12.67□□□□□ -0.38
TFF1-201ENST00000291527 ARHGEF25Q86VW2 580 aa12.67□□□□□ -0.38
TFF1-201ENST00000291527 CRB1P82279 1406 aa12.67□□□□□ -0.38
TFF1-201ENST00000291527 CPSF1Q10570 1443 aaKnown RBP12.67□□□□□ -0.38
TFF1-201ENST00000291527 MON2Q7Z3U7 1717 aa12.67□□□□□ -0.38
TFF1-201ENST00000291527 NFAT5O94916 1531 aa12.67□□□□□ -0.38
TFF1-201ENST00000291527 MARCH10Q8NA82 808 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms