RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 DUSP27Q5VZP5 1158 aa22.09■■□□□ 1.13
HIF3A-203ENST00000291300 ANKLE2Q86XL3 938 aa22.09■■□□□ 1.13
HIF3A-203ENST00000291300 RGPD8O14715 1765 aaPredicted RBP22.09■■□□□ 1.13
HIF3A-203ENST00000291300 GOLGA2Q08379 1002 aa22.08■■□□□ 1.13
HIF3A-203ENST00000291300 IQSEC2Q5JU85 1478 aa22.08■■□□□ 1.12
HIF3A-203ENST00000291300 ACEP12821 1306 aa22.08■■□□□ 1.12
HIF3A-203ENST00000291300 U2AF1L5P0DN76 240 aaPredicted RBP22.07■■□□□ 1.12
HIF3A-203ENST00000291300 U2AF1Q01081 240 aaKnown RBP eCLIP22.07■■□□□ 1.12
HIF3A-203ENST00000291300 NEUROD2Q15784 382 aa22.07■■□□□ 1.12
HIF3A-203ENST00000291300 POLKQ9UBT6 870 aa22.07■■□□□ 1.12
HIF3A-203ENST00000291300 MAP2P11137 1827 aaKnown RBP22.07■■□□□ 1.12
HIF3A-203ENST00000291300 RRP1P56182 461 aaKnown RBP22.06■■□□□ 1.12
HIF3A-203ENST00000291300 SLFN5Q08AF3 891 aa22.06■■□□□ 1.12
HIF3A-203ENST00000291300 TCP11L2Q8N4U5 519 aa22.06■■□□□ 1.12
HIF3A-203ENST00000291300 RUNDC1Q96C34 613 aa22.06■■□□□ 1.12
HIF3A-203ENST00000291300 RBM33Q96EV2 1170 aaKnown RBP22.06■■□□□ 1.12
HIF3A-203ENST00000291300 ERICH6BQ5W0A0 696 aa22.06■■□□□ 1.12
HIF3A-203ENST00000291300 PPP4R2Q9NY27 417 aa22.06■■□□□ 1.12
HIF3A-203ENST00000291300 PLEKHG3A1L390 1219 aa22.04■■□□□ 1.12
HIF3A-203ENST00000291300 U2SURPO15042 1029 aaKnown RBP22.04■■□□□ 1.12
HIF3A-203ENST00000291300 B4GALNT3Q6L9W6 998 aa22.04■■□□□ 1.12
HIF3A-203ENST00000291300 PNPLA6Q8IY17 1366 aa22.04■■□□□ 1.12
HIF3A-203ENST00000291300 NRKQ7Z2Y5 1582 aa22.04■■□□□ 1.12
HIF3A-203ENST00000291300 PPM1GO15355 546 aaPredicted RBP22.04■■□□□ 1.12
HIF3A-203ENST00000291300 PMFBP1Q8TBY8 1022 aa22.04■■□□□ 1.12
HIF3A-203ENST00000291300 EMILIN1Q9Y6C2 1016 aa22.04■■□□□ 1.12
HIF3A-203ENST00000291300 CHD2O14647 1828 aaKnown RBP22.04■■□□□ 1.12
HIF3A-203ENST00000291300 WWC1Q8IX03 1113 aa22.03■■□□□ 1.12
HIF3A-203ENST00000291300 TRMT2AQ8IZ69 625 aaKnown RBP22.03■■□□□ 1.12
HIF3A-203ENST00000291300 PLIN1O60240 522 aa22.02■■□□□ 1.12
HIF3A-203ENST00000291300 ZNF692Q9BU19 519 aaPredicted RBP22.02■■□□□ 1.12
HIF3A-203ENST00000291300 PIK3R4Q99570 1358 aa22.02■■□□□ 1.11
HIF3A-203ENST00000291300 TTC21BQ7Z4L5 1316 aa22.01■■□□□ 1.11
HIF3A-203ENST00000291300 USP6P35125 1406 aa22■■□□□ 1.11
HIF3A-203ENST00000291300 RRS1Q15050 365 aaKnown RBP22■■□□□ 1.11
HIF3A-203ENST00000291300 PLEKHF1Q96S99 279 aa22■■□□□ 1.11
HIF3A-203ENST00000291300 DIAPH1O60610 1272 aaKnown RBP21.99■■□□□ 1.11
HIF3A-203ENST00000291300 COG3Q96JB2 828 aa21.99■■□□□ 1.11
HIF3A-203ENST00000291300 PHF23Q9BUL5 403 aaPredicted RBP21.98■■□□□ 1.11
HIF3A-203ENST00000291300 NALCNQ8IZF0 1738 aa21.97■■□□□ 1.11
HIF3A-203ENST00000291300 NPHP4O75161 1426 aaPredicted RBP21.97■■□□□ 1.11
HIF3A-203ENST00000291300 SSH2Q76I76 1423 aa21.97■■□□□ 1.11
HIF3A-203ENST00000291300 FMN2Q9NZ56 1722 aa21.96■■□□□ 1.11
HIF3A-203ENST00000291300 EXOC6Q8TAG9 804 aa21.95■■□□□ 1.11
HIF3A-203ENST00000291300 AATKQ6ZMQ8 1374 aa21.94■■□□□ 1.1
HIF3A-203ENST00000291300 E9PSI1 815 aa21.94■■□□□ 1.1
HIF3A-203ENST00000291300 NGEFQ8N5V2 710 aa21.94■■□□□ 1.1
HIF3A-203ENST00000291300 OVOS2A0A0J9YW53 1432 aa21.93■■□□□ 1.1
HIF3A-203ENST00000291300 OVOS2Q6IE36 1432 aa21.93■■□□□ 1.1
HIF3A-203ENST00000291300 C20orf194Q5TEA3 1177 aa21.92■■□□□ 1.1
HIF3A-203ENST00000291300 NGDNQ8NEJ9 315 aaKnown RBP21.92■■□□□ 1.1
HIF3A-203ENST00000291300 TSHZ2Q9NRE2 1034 aa21.92■■□□□ 1.1
HIF3A-203ENST00000291300 LRRC7Q96NW7 1537 aa21.92■■□□□ 1.1
HIF3A-203ENST00000291300 IL13P35225 146 aa21.91■■□□□ 1.1
HIF3A-203ENST00000291300 PELP1Q8IZL8 1130 aaKnown RBP21.91■■□□□ 1.1
HIF3A-203ENST00000291300 CDK12Q9NYV4 1490 aaPredicted RBP21.91■■□□□ 1.1
HIF3A-203ENST00000291300 SOX12O15370 315 aa21.89■■□□□ 1.1
HIF3A-203ENST00000291300 HMOX1P09601 288 aa21.89■■□□□ 1.1
HIF3A-203ENST00000291300 TMPOP42166 694 aaKnown RBP21.89■■□□□ 1.1
HIF3A-203ENST00000291300 CCDC27Q2M243 656 aa21.89■■□□□ 1.09
HIF3A-203ENST00000291300 RSPH6AQ9H0K4 717 aa21.89■■□□□ 1.09
HIF3A-203ENST00000291300 TRIM35Q9UPQ4 493 aa21.89■■□□□ 1.09
HIF3A-203ENST00000291300 ANKARQ7Z5J8 1434 aa21.89■■□□□ 1.09
HIF3A-203ENST00000291300 PEAK1Q9H792 1746 aa21.88■■□□□ 1.09
HIF3A-203ENST00000291300 BCAR3O75815 825 aa21.87■■□□□ 1.09
HIF3A-203ENST00000291300 PRKAR2BP31323 418 aa21.87■■□□□ 1.09
HIF3A-203ENST00000291300 PIK3C2AO00443 1686 aa21.87■■□□□ 1.09
HIF3A-203ENST00000291300 WDR63Q8IWG1 891 aa21.86■■□□□ 1.09
HIF3A-203ENST00000291300 MAPK8IP3Q9UPT6 1336 aa21.86■■□□□ 1.09
HIF3A-203ENST00000291300 PHACTR3Q96KR7 559 aa21.86■■□□□ 1.09
HIF3A-203ENST00000291300 CRBNQ96SW2 442 aa21.85■■□□□ 1.09
HIF3A-203ENST00000291300 FCHSD2O94868 740 aa21.85■■□□□ 1.09
HIF3A-203ENST00000291300 USP31Q70CQ4 1352 aa21.84■■□□□ 1.09
HIF3A-203ENST00000291300 NUTM2GQ5VZR2 741 aa21.84■■□□□ 1.09
HIF3A-203ENST00000291300 CCDC136Q96JN2 1154 aa21.84■■□□□ 1.09
HIF3A-203ENST00000291300 ADGRL3Q9HAR2 1447 aa21.84■■□□□ 1.09
HIF3A-203ENST00000291300 TTC21AQ8NDW8 1320 aa21.84■■□□□ 1.09
HIF3A-203ENST00000291300 RIPK4P57078 832 aa21.83■■□□□ 1.08
HIF3A-203ENST00000291300 MARF1Q9Y4F3 1742 aaKnown RBP21.82■■□□□ 1.08
HIF3A-203ENST00000291300 EIF4A2Q14240 407 aaKnown RBP21.81■■□□□ 1.08
HIF3A-203ENST00000291300 NCBP3Q53F19 620 aaKnown RBP21.81■■□□□ 1.08
HIF3A-203ENST00000291300 HSP90AB2PQ58FF8 381 aa21.81■■□□□ 1.08
HIF3A-203ENST00000291300 HSPA2P54652 639 aa21.8■■□□□ 1.08
HIF3A-203ENST00000291300 TSR2Q969E8 191 aaKnown RBP21.8■■□□□ 1.08
HIF3A-203ENST00000291300 NWD1Q149M9 1564 aa21.8■■□□□ 1.08
HIF3A-203ENST00000291300 PHF8Q9UPP1 1060 aa21.8■■□□□ 1.08
HIF3A-203ENST00000291300 MAP3K19Q56UN5 1328 aa21.79■■□□□ 1.08
HIF3A-203ENST00000291300 AEBP1Q8IUX7 1158 aa21.79■■□□□ 1.08
HIF3A-203ENST00000291300 C14orf37Q86TY3 774 aa21.78■■□□□ 1.08
HIF3A-203ENST00000291300 NLRP6P59044 892 aa21.77■■□□□ 1.08
HIF3A-203ENST00000291300 PAK3O75914 559 aaPredicted RBP21.77■■□□□ 1.08
HIF3A-203ENST00000291300 ESCO1Q5FWF5 840 aa21.77■■□□□ 1.08
HIF3A-203ENST00000291300 FANCIQ9NVI1 1328 aa21.76■■□□□ 1.07
HIF3A-203ENST00000291300 STRCP1A6NGW2 1772 aa21.76■■□□□ 1.07
HIF3A-203ENST00000291300 ORAI2Q96SN7 254 aa21.76■■□□□ 1.07
HIF3A-203ENST00000291300 PNNQ9H307 717 aaKnown RBP21.76■■□□□ 1.07
HIF3A-203ENST00000291300 PROSER2Q86WR7 435 aaPredicted RBP21.75■■□□□ 1.07
HIF3A-203ENST00000291300 THUMPD2Q9BTF0 503 aaKnown RBP21.75■■□□□ 1.07
HIF3A-203ENST00000291300 KDM4FA0A1W2PPD8 638 aa21.74■■□□□ 1.07
HIF3A-203ENST00000291300 RARSP54136 660 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms