RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 PLCD3Q8N3E9 789 aa13.57□□□□□ -0.24
ACTC1-201ENST00000290378 ZCCHC11Q5TAX3 1644 aaKnown RBP13.57□□□□□ -0.24
ACTC1-201ENST00000290378 PRPF40AO75400 957 aaKnown RBP13.57□□□□□ -0.24
ACTC1-201ENST00000290378 SLC4A10Q6U841 1118 aa13.57□□□□□ -0.24
ACTC1-201ENST00000290378 TNPO1Q92973 898 aaKnown RBP13.57□□□□□ -0.24
ACTC1-201ENST00000290378 PCDHB15Q9Y5E8 787 aa13.57□□□□□ -0.24
ACTC1-201ENST00000290378 ZKSCAN2Q63HK3 967 aa13.56□□□□□ -0.24
ACTC1-201ENST00000290378 DZIP1LQ8IYY4 767 aaKnown RBP13.56□□□□□ -0.24
ACTC1-201ENST00000290378 NUDT16Q96DE0 195 aaKnown RBP13.56□□□□□ -0.24
ACTC1-201ENST00000290378 RTEL1-TNFRSF6BF6WH68 1400 aa13.55□□□□□ -0.24
ACTC1-201ENST00000290378 ZNF771Q7L3S4 317 aaPredicted RBP13.55□□□□□ -0.24
ACTC1-201ENST00000290378 MYO5CQ9NQX4 1742 aa13.55□□□□□ -0.24
ACTC1-201ENST00000290378 PSME1Q06323 249 aa13.55□□□□□ -0.24
ACTC1-201ENST00000290378 SKOR2Q2VWA4 1001 aaPredicted RBP13.54□□□□□ -0.24
ACTC1-201ENST00000290378 TAOK2Q9UL54 1235 aa13.54□□□□□ -0.24
ACTC1-201ENST00000290378 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
ACTC1-201ENST00000290378 SSFA2P28290 1259 aa13.54□□□□□ -0.24
ACTC1-201ENST00000290378 AAMPQ13685 434 aa13.54□□□□□ -0.24
ACTC1-201ENST00000290378 TBC1D32Q96NH3 1257 aa13.54□□□□□ -0.24
ACTC1-201ENST00000290378 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
ACTC1-201ENST00000290378 EMILIN1Q9Y6C2 1016 aa13.54□□□□□ -0.24
ACTC1-201ENST00000290378 PLA2R1Q13018 1463 aa13.54□□□□□ -0.24
ACTC1-201ENST00000290378 VGLL3A8MV65 326 aa13.54□□□□□ -0.24
ACTC1-201ENST00000290378 SPATA31E1Q6ZUB1 1445 aa13.53□□□□□ -0.24
ACTC1-201ENST00000290378 ZSCAN30Q86W11 494 aa13.53□□□□□ -0.24
ACTC1-201ENST00000290378 KDM2BQ8NHM5 1336 aa13.53□□□□□ -0.24
ACTC1-201ENST00000290378 ESCO1Q5FWF5 840 aa13.53□□□□□ -0.24
ACTC1-201ENST00000290378 THEMISQ8N1K5 641 aaPredicted RBP13.53□□□□□ -0.24
ACTC1-201ENST00000290378 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
ACTC1-201ENST00000290378 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.52□□□□□ -0.24
ACTC1-201ENST00000290378 EXOSC9Q06265 439 aaKnown RBP13.52□□□□□ -0.24
ACTC1-201ENST00000290378 CHMP4BQ9H444 224 aaKnown RBP13.52□□□□□ -0.24
ACTC1-201ENST00000290378 CHMP3Q9Y3E7 222 aa13.52□□□□□ -0.24
ACTC1-201ENST00000290378 DRC7Q8IY82 874 aa13.52□□□□□ -0.25
ACTC1-201ENST00000290378 ABTB2Q8N961 1025 aa13.52□□□□□ -0.25
ACTC1-201ENST00000290378 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.25
ACTC1-201ENST00000290378 CCDC61Q9Y6R9 512 aa13.52□□□□□ -0.25
ACTC1-201ENST00000290378 ADGBQ8N7X0 1667 aa13.51□□□□□ -0.25
ACTC1-201ENST00000290378 PLEKHH1Q9ULM0 1364 aa13.51□□□□□ -0.25
ACTC1-201ENST00000290378 ARHGEF5Q12774 1597 aa13.51□□□□□ -0.25
ACTC1-201ENST00000290378 PREX2Q70Z35 1606 aa13.51□□□□□ -0.25
ACTC1-201ENST00000290378 CCDC173Q0VFZ6 552 aa13.51□□□□□ -0.25
ACTC1-201ENST00000290378 CHAF1AQ13111 956 aaPredicted RBP13.51□□□□□ -0.25
ACTC1-201ENST00000290378 PDE3AQ14432 1141 aa13.51□□□□□ -0.25
ACTC1-201ENST00000290378 SULT6B1Q6IMI4 303 aa13.51□□□□□ -0.25
ACTC1-201ENST00000290378 ZNF428Q96B54 188 aa13.51□□□□□ -0.25
ACTC1-201ENST00000290378 ERBB4Q15303 1308 aa13.51□□□□□ -0.25
ACTC1-201ENST00000290378 DCTN1Q14203 1278 aa13.5□□□□□ -0.25
ACTC1-201ENST00000290378 NPATQ14207 1427 aa13.5□□□□□ -0.25
ACTC1-201ENST00000290378 AMOTL2Q9Y2J4 779 aa13.5□□□□□ -0.25
ACTC1-201ENST00000290378 RLBP1P12271 317 aa13.5□□□□□ -0.25
ACTC1-201ENST00000290378 ZNF330Q9Y3S2 320 aaPredicted RBP13.5□□□□□ -0.25
ACTC1-201ENST00000290378 IPO8O15397 1037 aaKnown RBP13.5□□□□□ -0.25
ACTC1-201ENST00000290378 GAS2L3Q86XJ1 694 aa13.5□□□□□ -0.25
ACTC1-201ENST00000290378 WWC1Q8IX03 1113 aa13.5□□□□□ -0.25
ACTC1-201ENST00000290378 MAP7D2Q96T17 732 aa13.5□□□□□ -0.25
ACTC1-201ENST00000290378 UHRF1BP1Q6BDS2 1440 aa13.5□□□□□ -0.25
ACTC1-201ENST00000290378 RBM27Q9P2N5 1060 aaKnown RBP13.49□□□□□ -0.25
ACTC1-201ENST00000290378 MAST1Q9Y2H9 1570 aa13.49□□□□□ -0.25
ACTC1-201ENST00000290378 POGZQ7Z3K3 1410 aa13.49□□□□□ -0.25
ACTC1-201ENST00000290378 UHRF1BP1LA0JNW5 1464 aa13.49□□□□□ -0.25
ACTC1-201ENST00000290378 SPDYE4A6NLX3 237 aa13.49□□□□□ -0.25
ACTC1-201ENST00000290378 TSC1Q92574 1164 aa13.49□□□□□ -0.25
ACTC1-201ENST00000290378 CASC1Q6TDU7 716 aa13.49□□□□□ -0.25
ACTC1-201ENST00000290378 ATP10AO60312 1499 aa13.48□□□□□ -0.25
ACTC1-201ENST00000290378 ABCC1P33527 1531 aa13.48□□□□□ -0.25
ACTC1-201ENST00000290378 FGD1P98174 961 aa13.48□□□□□ -0.25
ACTC1-201ENST00000290378 CGNQ9P2M7 1197 aaKnown RBP13.48□□□□□ -0.25
ACTC1-201ENST00000290378 WASLO00401 505 aaPredicted RBP13.47□□□□□ -0.25
ACTC1-201ENST00000290378 SYCE3A1L190 88 aa13.47□□□□□ -0.25
ACTC1-201ENST00000290378 ZNF830Q96NB3 372 aaPredicted RBP13.47□□□□□ -0.25
ACTC1-201ENST00000290378 FYB1O15117 783 aa13.46□□□□□ -0.25
ACTC1-201ENST00000290378 EIF2S2P20042 333 aaKnown RBP13.46□□□□□ -0.25
ACTC1-201ENST00000290378 PROSER2Q86WR7 435 aaPredicted RBP13.46□□□□□ -0.25
ACTC1-201ENST00000290378 CDC42BPBQ9Y5S2 1711 aa13.46□□□□□ -0.25
ACTC1-201ENST00000290378 ATAD2Q6PL18 1390 aa13.46□□□□□ -0.25
ACTC1-201ENST00000290378 PARD3Q8TEW0 1356 aa13.46□□□□□ -0.25
ACTC1-201ENST00000290378 TSPOAP1O95153 1857 aa13.46□□□□□ -0.26
ACTC1-201ENST00000290378 ZNF592Q92610 1267 aa13.45□□□□□ -0.26
ACTC1-201ENST00000290378 CHMP4AQ9BY43 222 aa13.45□□□□□ -0.26
ACTC1-201ENST00000290378 MIS18AQ9NYP9 233 aa13.45□□□□□ -0.26
ACTC1-201ENST00000290378 TRERF1Q96PN7 1200 aa13.45□□□□□ -0.26
ACTC1-201ENST00000290378 RARSP54136 660 aaKnown RBP13.45□□□□□ -0.26
ACTC1-201ENST00000290378 LRPPRCP42704 1394 aaKnown RBP13.44□□□□□ -0.26
ACTC1-201ENST00000290378 ZMYM3Q14202 1370 aa13.44□□□□□ -0.26
ACTC1-201ENST00000290378 ANKLE2Q86XL3 938 aa13.44□□□□□ -0.26
ACTC1-201ENST00000290378 NOB1Q9ULX3 412 aaKnown RBP13.44□□□□□ -0.26
ACTC1-201ENST00000290378 PTMSP20962 102 aa13.44□□□□□ -0.26
ACTC1-201ENST00000290378 TMPOP42166 694 aaKnown RBP13.44□□□□□ -0.26
ACTC1-201ENST00000290378 NGEFQ8N5V2 710 aa13.44□□□□□ -0.26
ACTC1-201ENST00000290378 STK31Q9BXU1 1019 aa13.44□□□□□ -0.26
ACTC1-201ENST00000290378 DDX19BQ9UMR2 479 aa13.44□□□□□ -0.26
ACTC1-201ENST00000290378 TNRQ92752 1358 aa13.43□□□□□ -0.26
ACTC1-201ENST00000290378 FOXO3O43524 673 aa13.43□□□□□ -0.26
ACTC1-201ENST00000290378 OS9Q13438 667 aaPredicted RBP13.43□□□□□ -0.26
ACTC1-201ENST00000290378 CHAMP1Q96JM3 812 aa13.43□□□□□ -0.26
ACTC1-201ENST00000290378 SPC24Q8NBT2 197 aa13.43□□□□□ -0.26
ACTC1-201ENST00000290378 COL17A1Q9UMD9 1497 aaPredicted RBP13.43□□□□□ -0.26
ACTC1-201ENST00000290378 TRIM6-TRIM34B2RNG4 842 aa13.42□□□□□ -0.26
ACTC1-201ENST00000290378 K7ELQ4 463 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms