RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 BICD2Q8TD16 824 aa21.08■□□□□ 0.96
PCDHA13-201ENST00000289272 PDZRN3Q9UPQ7 1066 aa21.08■□□□□ 0.96
PCDHA13-201ENST00000289272 POGZQ7Z3K3 1410 aa21.08■□□□□ 0.96
PCDHA13-201ENST00000289272 K7ELQ4 463 aaPredicted RBP21.08■□□□□ 0.96
PCDHA13-201ENST00000289272 IPO7O95373 1038 aaKnown RBP21.07■□□□□ 0.96
PCDHA13-201ENST00000289272 CCDC73Q6ZRK6 1079 aa21.07■□□□□ 0.96
PCDHA13-201ENST00000289272 ARHGEF11O15085 1522 aa21.07■□□□□ 0.96
PCDHA13-201ENST00000289272 CPLX2Q6PUV4 134 aaKnown RBP21.07■□□□□ 0.96
PCDHA13-201ENST00000289272 G3V3G9 751 aa21.06■□□□□ 0.96
PCDHA13-201ENST00000289272 TPD52L1Q16890 204 aaPredicted RBP21.06■□□□□ 0.96
PCDHA13-201ENST00000289272 DCAF8Q5TAQ9 597 aa21.06■□□□□ 0.96
PCDHA13-201ENST00000289272 CCAR2Q8N163 923 aaKnown RBP21.06■□□□□ 0.96
PCDHA13-201ENST00000289272 SLC12A5Q9H2X9 1139 aa21.06■□□□□ 0.96
PCDHA13-201ENST00000289272 MAPKBP1O60336 1514 aa21.05■□□□□ 0.96
PCDHA13-201ENST00000289272 PDCP20941 246 aa21.04■□□□□ 0.96
PCDHA13-201ENST00000289272 THEMISQ8N1K5 641 aaPredicted RBP21.04■□□□□ 0.96
PCDHA13-201ENST00000289272 PLB1Q6P1J6 1458 aa21.04■□□□□ 0.96
PCDHA13-201ENST00000289272 BCAR3O75815 825 aa21.04■□□□□ 0.96
PCDHA13-201ENST00000289272 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
PCDHA13-201ENST00000289272 GPRASP1Q5JY77 1395 aa21.03■□□□□ 0.96
PCDHA13-201ENST00000289272 EXOSC9Q06265 439 aaKnown RBP21.03■□□□□ 0.96
PCDHA13-201ENST00000289272 LEKR1Q6ZMV7 388 aa21.03■□□□□ 0.96
PCDHA13-201ENST00000289272 WDR63Q8IWG1 891 aa21.03■□□□□ 0.96
PCDHA13-201ENST00000289272 GRIN2AQ12879 1464 aa21.02■□□□□ 0.96
PCDHA13-201ENST00000289272 ANO2Q9NQ90 1003 aa21.02■□□□□ 0.95
PCDHA13-201ENST00000289272 RBM10P98175 930 aaKnown RBP21.01■□□□□ 0.95
PCDHA13-201ENST00000289272 RAPGEF4Q8WZA2 1011 aa21.01■□□□□ 0.95
PCDHA13-201ENST00000289272 KIF14Q15058 1648 aa21.01■□□□□ 0.95
PCDHA13-201ENST00000289272 FKBP5Q13451 457 aaPredicted RBP21.01■□□□□ 0.95
PCDHA13-201ENST00000289272 CCDC112Q8NEF3 446 aa21.01■□□□□ 0.95
PCDHA13-201ENST00000289272 ERC2O15083 957 aa21■□□□□ 0.95
PCDHA13-201ENST00000289272 KIF2AO00139 706 aaPredicted RBP21■□□□□ 0.95
PCDHA13-201ENST00000289272 THOC2Q8NI27 1593 aaKnown RBP21■□□□□ 0.95
PCDHA13-201ENST00000289272 PSMA5P28066 241 aa21■□□□□ 0.95
PCDHA13-201ENST00000289272 TSPYL4Q9UJ04 414 aa21■□□□□ 0.95
PCDHA13-201ENST00000289272 WDR33Q9C0J8 1336 aaKnown RBP21■□□□□ 0.95
PCDHA13-201ENST00000289272 RUFY1Q96T51 708 aa20.99■□□□□ 0.95
PCDHA13-201ENST00000289272 PRPF40AO75400 957 aaKnown RBP20.99■□□□□ 0.95
PCDHA13-201ENST00000289272 CCDC192P0DO97 292 aa20.99■□□□□ 0.95
PCDHA13-201ENST00000289272 AEBP1Q8IUX7 1158 aa20.99■□□□□ 0.95
PCDHA13-201ENST00000289272 TXNDC2Q86VQ3 553 aa20.99■□□□□ 0.95
PCDHA13-201ENST00000289272 PRKAR2BP31323 418 aa20.98■□□□□ 0.95
PCDHA13-201ENST00000289272 CLCN1P35523 988 aa20.98■□□□□ 0.95
PCDHA13-201ENST00000289272 EIF2S2P20042 333 aaKnown RBP20.98■□□□□ 0.95
PCDHA13-201ENST00000289272 USP8P40818 1118 aa20.98■□□□□ 0.95
PCDHA13-201ENST00000289272 DHX29Q7Z478 1369 aaKnown RBP20.98■□□□□ 0.95
PCDHA13-201ENST00000289272 PRAM1Q96QH2 718 aa20.98■□□□□ 0.95
PCDHA13-201ENST00000289272 C9orf78Q9NZ63 289 aaPredicted RBP20.98■□□□□ 0.95
PCDHA13-201ENST00000289272 TRIM5Q9C035 493 aa20.97■□□□□ 0.95
PCDHA13-201ENST00000289272 ZNF692Q9BU19 519 aaPredicted RBP20.96■□□□□ 0.95
PCDHA13-201ENST00000289272 CLSTN1O94985 981 aa20.96■□□□□ 0.95
PCDHA13-201ENST00000289272 SLFN5Q08AF3 891 aa20.96■□□□□ 0.95
PCDHA13-201ENST00000289272 ZNF428Q96B54 188 aa20.96■□□□□ 0.95
PCDHA13-201ENST00000289272 VPS37CA5D8V6 355 aaPredicted RBP20.96■□□□□ 0.95
PCDHA13-201ENST00000289272 CCDC47Q96A33 483 aaKnown RBP20.96■□□□□ 0.95
PCDHA13-201ENST00000289272 DYNC1I1O14576 645 aa20.95■□□□□ 0.94
PCDHA13-201ENST00000289272 TRIM29Q14134 588 aa20.95■□□□□ 0.94
PCDHA13-201ENST00000289272 RDXP35241 583 aaKnown RBP20.95■□□□□ 0.94
PCDHA13-201ENST00000289272 RNF214Q8ND24 703 aa20.95■□□□□ 0.94
PCDHA13-201ENST00000289272 NECTIN2Q92692 538 aa20.95■□□□□ 0.94
PCDHA13-201ENST00000289272 RASSF8Q8NHQ8 419 aa20.94■□□□□ 0.94
PCDHA13-201ENST00000289272 DCTN1Q14203 1278 aa20.94■□□□□ 0.94
PCDHA13-201ENST00000289272 TSR2Q969E8 191 aaKnown RBP20.94■□□□□ 0.94
PCDHA13-201ENST00000289272 PTPRKQ15262 1439 aa20.94■□□□□ 0.94
PCDHA13-201ENST00000289272 GAS2L2Q8NHY3 880 aa20.93■□□□□ 0.94
PCDHA13-201ENST00000289272 APPP05067 770 aa20.93■□□□□ 0.94
PCDHA13-201ENST00000289272 OLFM4Q6UX06 510 aa20.92■□□□□ 0.94
PCDHA13-201ENST00000289272 UGGT2Q9NYU1 1516 aa20.92■□□□□ 0.94
PCDHA13-201ENST00000289272 EIF3JO75822 258 aaKnown RBP20.92■□□□□ 0.94
PCDHA13-201ENST00000289272 NOB1Q9ULX3 412 aaKnown RBP20.92■□□□□ 0.94
PCDHA13-201ENST00000289272 HIP1O00291 1037 aa20.92■□□□□ 0.94
PCDHA13-201ENST00000289272 NLRP6P59044 892 aa20.92■□□□□ 0.94
PCDHA13-201ENST00000289272 FOXD4L6Q3SYB3 417 aaPredicted RBP20.92■□□□□ 0.94
PCDHA13-201ENST00000289272 FOXD4L3Q6VB84 417 aaPredicted RBP20.92■□□□□ 0.94
PCDHA13-201ENST00000289272 SYNE3Q6ZMZ3 975 aa20.91■□□□□ 0.94
PCDHA13-201ENST00000289272 IFIT2P09913 472 aaKnown RBP20.91■□□□□ 0.94
PCDHA13-201ENST00000289272 MVPQ14764 893 aaKnown RBP20.91■□□□□ 0.94
PCDHA13-201ENST00000289272 CEP89Q96ST8 783 aa20.91■□□□□ 0.94
PCDHA13-201ENST00000289272 PLEKHH1Q9ULM0 1364 aa20.91■□□□□ 0.94
PCDHA13-201ENST00000289272 TWISTNBQ3B726 338 aaPredicted RBP20.91■□□□□ 0.94
PCDHA13-201ENST00000289272 WWC1Q8IX03 1113 aa20.91■□□□□ 0.94
PCDHA13-201ENST00000289272 CALCOCO1Q9P1Z2 691 aa20.91■□□□□ 0.94
PCDHA13-201ENST00000289272 ERLIN1O75477 346 aa20.91■□□□□ 0.94
PCDHA13-201ENST00000289272 CDK19Q9BWU1 502 aa20.9■□□□□ 0.94
PCDHA13-201ENST00000289272 ATF7IPQ6VMQ6 1270 aa20.89■□□□□ 0.93
PCDHA13-201ENST00000289272 PRIMPOLQ96LW4 560 aa20.89■□□□□ 0.93
PCDHA13-201ENST00000289272 AMOTL1Q8IY63 956 aa20.89■□□□□ 0.93
PCDHA13-201ENST00000289272 NSD3Q9BZ95 1437 aa20.89■□□□□ 0.93
PCDHA13-201ENST00000289272 ATAD2Q6PL18 1390 aa20.89■□□□□ 0.93
PCDHA13-201ENST00000289272 NOL10Q9BSC4 688 aaKnown RBP20.89■□□□□ 0.93
PCDHA13-201ENST00000289272 CNTROBQ8N137 903 aa20.88■□□□□ 0.93
PCDHA13-201ENST00000289272 CGNQ9P2M7 1197 aaKnown RBP20.88■□□□□ 0.93
PCDHA13-201ENST00000289272 MEX3CQ5U5Q3 659 aaKnown RBP20.88■□□□□ 0.93
PCDHA13-201ENST00000289272 CABP1Q9NZU7 370 aa20.88■□□□□ 0.93
PCDHA13-201ENST00000289272 AKAP17AQ02040 695 aaKnown RBP20.88■□□□□ 0.93
PCDHA13-201ENST00000289272 PROSER2Q86WR7 435 aaPredicted RBP20.87■□□□□ 0.93
PCDHA13-201ENST00000289272 TOMM22Q9NS69 142 aa20.87■□□□□ 0.93
PCDHA13-201ENST00000289272 KINO60870 393 aaKnown RBP20.87■□□□□ 0.93
PCDHA13-201ENST00000289272 NEK4P51957 841 aa20.87■□□□□ 0.93
PCDHA13-201ENST00000289272 G3BP1Q13283 466 aaKnown RBP eCLIP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms