RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 COL22A1Q8NFW1 1626 aaPredicted RBP9.69□□□□□ -0.86
SSX2B-201ENST00000288839 EIF3AQ14152 1382 aaKnown RBP9.68□□□□□ -0.86
SSX2B-201ENST00000288839 SOS2Q07890 1332 aaPredicted RBP9.68□□□□□ -0.86
SSX2B-201ENST00000288839 PRR36Q9H6K5 1346 aa9.68□□□□□ -0.86
SSX2B-201ENST00000288839 SPDYE1Q8NFV5 336 aaPredicted RBP9.68□□□□□ -0.86
SSX2B-201ENST00000288839 KIF1AQ12756 1690 aa9.67□□□□□ -0.86
SSX2B-201ENST00000288839 QRICH2Q9H0J4 1663 aa9.67□□□□□ -0.86
SSX2B-201ENST00000288839 AFF2P51816 1311 aa9.67□□□□□ -0.86
SSX2B-201ENST00000288839 FOXO3O43524 673 aa9.67□□□□□ -0.86
SSX2B-201ENST00000288839 ADAMTS2O95450 1211 aa9.67□□□□□ -0.86
SSX2B-201ENST00000288839 C8orf37Q96NL8 207 aa9.67□□□□□ -0.86
SSX2B-201ENST00000288839 CDK19Q9BWU1 502 aa9.67□□□□□ -0.86
SSX2B-201ENST00000288839 ABCA3Q99758 1704 aa9.66□□□□□ -0.86
SSX2B-201ENST00000288839 PLEKHG5O94827 1062 aa9.66□□□□□ -0.86
SSX2B-201ENST00000288839 EVX2Q03828 476 aa9.66□□□□□ -0.86
SSX2B-201ENST00000288839 TULP4Q9NRJ4 1543 aa9.66□□□□□ -0.86
SSX2B-201ENST00000288839 ANKARQ7Z5J8 1434 aa9.65□□□□□ -0.86
SSX2B-201ENST00000288839 USP47Q96K76 1375 aa9.65□□□□□ -0.86
SSX2B-201ENST00000288839 ST20-MTHFSA0A0A6YYL1 179 aa9.65□□□□□ -0.86
SSX2B-201ENST00000288839 SRPK2P78362 688 aaKnown RBP9.65□□□□□ -0.86
SSX2B-201ENST00000288839 PMFBP1Q8TBY8 1022 aa9.65□□□□□ -0.86
SSX2B-201ENST00000288839 LRRC59Q96AG4 307 aaKnown RBP9.65□□□□□ -0.86
SSX2B-201ENST00000288839 NUDT16Q96DE0 195 aaKnown RBP9.65□□□□□ -0.86
SSX2B-201ENST00000288839 CABP2Q9NPB3 220 aa9.65□□□□□ -0.86
SSX2B-201ENST00000288839 PHF8Q9UPP1 1060 aa9.65□□□□□ -0.86
SSX2B-201ENST00000288839 EP400Q96L91 3159 aa9.65□□□□□ -0.87
SSX2B-201ENST00000288839 RGS12O14924 1447 aa9.65□□□□□ -0.87
SSX2B-201ENST00000288839 TRPM3Q9HCF6 1732 aaPredicted RBP9.64□□□□□ -0.87
SSX2B-201ENST00000288839 ATP7BP35670 1465 aa9.64□□□□□ -0.87
SSX2B-201ENST00000288839 NPHP3Q7Z494 1330 aa9.63□□□□□ -0.87
SSX2B-201ENST00000288839 EVC2Q86UK5 1308 aa9.63□□□□□ -0.87
SSX2B-201ENST00000288839 TOPAZ1Q8N9V7 1692 aa9.63□□□□□ -0.87
SSX2B-201ENST00000288839 TNS3Q68CZ2 1445 aa9.63□□□□□ -0.87
SSX2B-201ENST00000288839 MARF1Q9Y4F3 1742 aaKnown RBP9.62□□□□□ -0.87
SSX2B-201ENST00000288839 TESK2Q96S53 571 aa9.62□□□□□ -0.87
SSX2B-201ENST00000288839 SBNO2Q9Y2G9 1366 aa9.62□□□□□ -0.87
SSX2B-201ENST00000288839 KRT28Q7Z3Y7 464 aa9.61□□□□□ -0.87
SSX2B-201ENST00000288839 NGDNQ8NEJ9 315 aaKnown RBP9.61□□□□□ -0.87
SSX2B-201ENST00000288839 CABLES1Q8TDN4 633 aa9.61□□□□□ -0.87
SSX2B-201ENST00000288839 CCDC61Q9Y6R9 512 aa9.61□□□□□ -0.87
SSX2B-201ENST00000288839 CRYBG1Q9Y4K1 1723 aa9.6□□□□□ -0.87
SSX2B-201ENST00000288839 PPIP5K1Q6PFW1 1433 aa9.6□□□□□ -0.87
SSX2B-201ENST00000288839 HSPA5P11021 654 aaKnown RBP9.6□□□□□ -0.87
SSX2B-201ENST00000288839 PSME1Q06323 249 aa9.6□□□□□ -0.87
SSX2B-201ENST00000288839 ZNF772Q68DY9 489 aaPredicted RBP9.6□□□□□ -0.87
SSX2B-201ENST00000288839 CABP1Q9NZU7 370 aa9.6□□□□□ -0.87
SSX2B-201ENST00000288839 PLCH1Q4KWH8 1693 aa9.6□□□□□ -0.87
SSX2B-201ENST00000288839 ALS2Q96Q42 1657 aa9.6□□□□□ -0.87
SSX2B-201ENST00000288839 ACEP12821 1306 aa9.59□□□□□ -0.87
SSX2B-201ENST00000288839 SPATA31A3Q5VYP0 1347 aa9.59□□□□□ -0.87
SSX2B-201ENST00000288839 NGLY1Q96IV0 654 aa9.59□□□□□ -0.87
SSX2B-201ENST00000288839 ITSN1Q15811 1721 aa9.59□□□□□ -0.87
SSX2B-201ENST00000288839 BCL9LQ86UU0 1499 aa9.59□□□□□ -0.87
SSX2B-201ENST00000288839 SRCAPQ6ZRS2 3230 aa9.58□□□□□ -0.88
SSX2B-201ENST00000288839 ATRNO75882 1429 aa9.58□□□□□ -0.88
SSX2B-201ENST00000288839 PLEKHG3A1L390 1219 aa9.58□□□□□ -0.88
SSX2B-201ENST00000288839 EIF4G2P78344 907 aaKnown RBP eCLIP9.58□□□□□ -0.88
SSX2B-201ENST00000288839 FKBP8Q14318 412 aa9.58□□□□□ -0.88
SSX2B-201ENST00000288839 LMOD2Q6P5Q4 547 aa9.58□□□□□ -0.88
SSX2B-201ENST00000288839 ATAD2Q6PL18 1390 aa9.58□□□□□ -0.88
SSX2B-201ENST00000288839 GLI3P10071 1580 aa9.58□□□□□ -0.88
SSX2B-201ENST00000288839 PAK3O75914 559 aaPredicted RBP9.57□□□□□ -0.88
SSX2B-201ENST00000288839 TMF1P82094 1093 aa9.57□□□□□ -0.88
SSX2B-201ENST00000288839 USP21Q9UK80 565 aa9.57□□□□□ -0.88
SSX2B-201ENST00000288839 POLR3AO14802 1390 aaPredicted RBP9.57□□□□□ -0.88
SSX2B-201ENST00000288839 SLIT2O94813 1529 aa9.56□□□□□ -0.88
SSX2B-201ENST00000288839 NRAPQ86VF7 1730 aa9.56□□□□□ -0.88
SSX2B-201ENST00000288839 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.56□□□□□ -0.88
SSX2B-201ENST00000288839 CDK12Q9NYV4 1490 aaPredicted RBP9.56□□□□□ -0.88
SSX2B-201ENST00000288839 SBNO1A3KN83 1393 aa9.56□□□□□ -0.88
SSX2B-201ENST00000288839 PRR29P0C7W0 189 aa9.56□□□□□ -0.88
SSX2B-201ENST00000288839 RXRBP28702 533 aa9.56□□□□□ -0.88
SSX2B-201ENST00000288839 CHADLQ6NUI6 762 aa9.56□□□□□ -0.88
SSX2B-201ENST00000288839 TMC1Q8TDI8 760 aa9.56□□□□□ -0.88
SSX2B-201ENST00000288839 SLC12A5Q9H2X9 1139 aa9.56□□□□□ -0.88
SSX2B-201ENST00000288839 QTRT2Q9H974 415 aaKnown RBP9.56□□□□□ -0.88
SSX2B-201ENST00000288839 PHRF1Q9P1Y6 1649 aaKnown RBP9.56□□□□□ -0.88
SSX2B-201ENST00000288839 PRKAR2AP13861 404 aaKnown RBP9.55□□□□□ -0.88
SSX2B-201ENST00000288839 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
SSX2B-201ENST00000288839 NUTM2GQ5VZR2 741 aa9.54□□□□□ -0.88
SSX2B-201ENST00000288839 FNBP4Q8N3X1 1017 aaPredicted RBP9.54□□□□□ -0.88
SSX2B-201ENST00000288839 POLR3GLQ9BT43 218 aa9.54□□□□□ -0.88
SSX2B-201ENST00000288839 NRKQ7Z2Y5 1582 aa9.54□□□□□ -0.88
SSX2B-201ENST00000288839 ARHGEF10O15013 1369 aa9.53□□□□□ -0.88
SSX2B-201ENST00000288839 RBM6P78332 1123 aaKnown RBP9.53□□□□□ -0.88
SSX2B-201ENST00000288839 PUS7Q96PZ0 661 aaKnown RBP9.53□□□□□ -0.88
SSX2B-201ENST00000288839 USP6P35125 1406 aa9.53□□□□□ -0.88
SSX2B-201ENST00000288839 CD163L1Q9NR16 1453 aa9.53□□□□□ -0.88
SSX2B-201ENST00000288839 KTN1Q86UP2 1357 aaKnown RBP9.52□□□□□ -0.88
SSX2B-201ENST00000288839 C19orf67A6NJJ6 358 aa9.52□□□□□ -0.89
SSX2B-201ENST00000288839 C11orf95C9JLR9 678 aaPredicted RBP9.52□□□□□ -0.89
SSX2B-201ENST00000288839 HAP1P54257 671 aaPredicted RBP9.52□□□□□ -0.89
SSX2B-201ENST00000288839 CPSF1Q10570 1443 aaKnown RBP9.52□□□□□ -0.89
SSX2B-201ENST00000288839 CDCA8Q53HL2 280 aa9.52□□□□□ -0.89
SSX2B-201ENST00000288839 PROM2Q8N271 834 aa9.52□□□□□ -0.89
SSX2B-201ENST00000288839 UPF1Q92900 1129 aaKnown RBP eCLIP9.52□□□□□ -0.89
SSX2B-201ENST00000288839 TRPC5Q9UL62 973 aaPredicted RBP9.52□□□□□ -0.89
SSX2B-201ENST00000288839 NWD2Q9ULI1 1742 aa9.51□□□□□ -0.89
SSX2B-201ENST00000288839 HDGFL2Q7Z4V5 671 aaPredicted RBP9.51□□□□□ -0.89
SSX2B-201ENST00000288839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms