RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZNF592Q92610 1267 aa15.35■□□□□ 0.05
SLC6A1-201ENST00000287766 GCC2Q8IWJ2 1684 aa15.35■□□□□ 0.05
SLC6A1-201ENST00000287766 CHD1LQ86WJ1 897 aa15.35■□□□□ 0.05
SLC6A1-201ENST00000287766 SLC52A1Q9NWF4 448 aa15.35■□□□□ 0.05
SLC6A1-201ENST00000287766 EIF4G3O43432 1585 aaKnown RBP15.34■□□□□ 0.05
SLC6A1-201ENST00000287766 TBC1D2Q9BYX2 928 aa15.34■□□□□ 0.05
SLC6A1-201ENST00000287766 PBRM1Q86U86 1689 aa15.34■□□□□ 0.05
SLC6A1-201ENST00000287766 DENND4BO75064 1496 aaPredicted RBP15.34■□□□□ 0.05
SLC6A1-201ENST00000287766 C14orf93Q9H972 538 aaKnown RBP15.34■□□□□ 0.05
SLC6A1-201ENST00000287766 FANCAO15360 1455 aa15.34■□□□□ 0.05
SLC6A1-201ENST00000287766 NME9Q86XW9 330 aa15.34■□□□□ 0.05
SLC6A1-201ENST00000287766 CDC45O75419 566 aa15.33■□□□□ 0.04
SLC6A1-201ENST00000287766 CSB-PGBD3P0DP91 1061 aa15.33■□□□□ 0.04
SLC6A1-201ENST00000287766 SLC26A8Q96RN1 970 aa15.33■□□□□ 0.04
SLC6A1-201ENST00000287766 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
SLC6A1-201ENST00000287766 PLCH2O75038 1416 aa15.32■□□□□ 0.04
SLC6A1-201ENST00000287766 MRE11P49959 708 aa15.32■□□□□ 0.04
SLC6A1-201ENST00000287766 CHMP3Q9Y3E7 222 aa15.32■□□□□ 0.04
SLC6A1-201ENST00000287766 NLRP6P59044 892 aa15.32■□□□□ 0.04
SLC6A1-201ENST00000287766 ARHGEF12Q9NZN5 1544 aa15.31■□□□□ 0.04
SLC6A1-201ENST00000287766 ADGRL2O95490 1459 aa15.31■□□□□ 0.04
SLC6A1-201ENST00000287766 TARBP1Q13395 1621 aaKnown RBP15.31■□□□□ 0.04
SLC6A1-201ENST00000287766 REC8O95072 547 aa15.31■□□□□ 0.04
SLC6A1-201ENST00000287766 COL17A1Q9UMD9 1497 aaPredicted RBP15.31■□□□□ 0.04
SLC6A1-201ENST00000287766 ASXL1Q8IXJ9 1541 aa15.31■□□□□ 0.04
SLC6A1-201ENST00000287766 MCM4P33991 863 aa15.31■□□□□ 0.04
SLC6A1-201ENST00000287766 INTS3Q68E01 1043 aaKnown RBP15.31■□□□□ 0.04
SLC6A1-201ENST00000287766 MCM10Q7L590 875 aa15.31■□□□□ 0.04
SLC6A1-201ENST00000287766 GOLGA6L1Q8N7Z2 621 aa15.31■□□□□ 0.04
SLC6A1-201ENST00000287766 RPGRIP1LQ68CZ1 1315 aa15.31■□□□□ 0.04
SLC6A1-201ENST00000287766 FCHSD2O94868 740 aa15.3■□□□□ 0.04
SLC6A1-201ENST00000287766 FAM83GA6ND36 823 aa15.3■□□□□ 0.04
SLC6A1-201ENST00000287766 PHF14O94880 888 aa15.3■□□□□ 0.04
SLC6A1-201ENST00000287766 CCAR2Q8N163 923 aaKnown RBP15.3■□□□□ 0.04
SLC6A1-201ENST00000287766 CD109Q6YHK3 1445 aa15.3■□□□□ 0.04
SLC6A1-201ENST00000287766 NINLQ9Y2I6 1382 aa15.3■□□□□ 0.04
SLC6A1-201ENST00000287766 TEFQ10587 303 aa15.29■□□□□ 0.04
SLC6A1-201ENST00000287766 NFE2L2Q16236 605 aa15.29■□□□□ 0.04
SLC6A1-201ENST00000287766 RTEL1-TNFRSF6BF6WH68 1400 aa15.29■□□□□ 0.04
SLC6A1-201ENST00000287766 KDM5BQ9UGL1 1544 aa15.28■□□□□ 0.04
SLC6A1-201ENST00000287766 SMARCA5O60264 1052 aaPredicted RBP15.28■□□□□ 0.04
SLC6A1-201ENST00000287766 CSPP1Q1MSJ5 1256 aa15.28■□□□□ 0.04
SLC6A1-201ENST00000287766 RNF214Q8ND24 703 aa15.28■□□□□ 0.04
SLC6A1-201ENST00000287766 GCC1Q96CN9 775 aa15.27■□□□□ 0.04
SLC6A1-201ENST00000287766 DUOX2Q9NRD8 1548 aa15.27■□□□□ 0.04
SLC6A1-201ENST00000287766 NASPP49321 788 aaPredicted RBP15.27■□□□□ 0.04
SLC6A1-201ENST00000287766 NEK4P51957 841 aa15.27■□□□□ 0.04
SLC6A1-201ENST00000287766 SHANK2Q9UPX8 1470 aa15.27■□□□□ 0.04
SLC6A1-201ENST00000287766 FYB1O15117 783 aa15.27■□□□□ 0.03
SLC6A1-201ENST00000287766 CT47B1P0C2W7 299 aaPredicted RBP15.27■□□□□ 0.03
SLC6A1-201ENST00000287766 ATAD2Q6PL18 1390 aa15.27■□□□□ 0.03
SLC6A1-201ENST00000287766 NUDT16Q96DE0 195 aaKnown RBP15.27■□□□□ 0.03
SLC6A1-201ENST00000287766 MAP7D2Q96T17 732 aa15.27■□□□□ 0.03
SLC6A1-201ENST00000287766 MAPK8IP2Q13387 824 aaPredicted RBP15.26■□□□□ 0.03
SLC6A1-201ENST00000287766 CAVIN1Q6NZI2 390 aaKnown RBP15.26■□□□□ 0.03
SLC6A1-201ENST00000287766 NUP160Q12769 1436 aa15.26■□□□□ 0.03
SLC6A1-201ENST00000287766 C9orf78Q9NZ63 289 aaPredicted RBP15.25■□□□□ 0.03
SLC6A1-201ENST00000287766 ZRANB1Q9UGI0 708 aa15.25■□□□□ 0.03
SLC6A1-201ENST00000287766 NOC3LQ8WTT2 800 aaKnown RBP15.25■□□□□ 0.03
SLC6A1-201ENST00000287766 CEP170Q5SW79 1584 aa15.25■□□□□ 0.03
SLC6A1-201ENST00000287766 HTATSF1O43719 755 aaKnown RBP15.25■□□□□ 0.03
SLC6A1-201ENST00000287766 GNL2Q13823 731 aaKnown RBP15.25■□□□□ 0.03
SLC6A1-201ENST00000287766 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.24■□□□□ 0.03
SLC6A1-201ENST00000287766 F6X3S4 739 aa15.24■□□□□ 0.03
SLC6A1-201ENST00000287766 MAP4K4O95819 1239 aaPredicted RBP15.24■□□□□ 0.03
SLC6A1-201ENST00000287766 AIMP1Q12904 312 aaKnown RBP15.24■□□□□ 0.03
SLC6A1-201ENST00000287766 TBC1D32Q96NH3 1257 aa15.24■□□□□ 0.03
SLC6A1-201ENST00000287766 EXOC6BQ9Y2D4 811 aa15.24■□□□□ 0.03
SLC6A1-201ENST00000287766 RRP9O43818 475 aaKnown RBP15.24■□□□□ 0.03
SLC6A1-201ENST00000287766 PRPF40AO75400 957 aaKnown RBP15.24■□□□□ 0.03
SLC6A1-201ENST00000287766 SURF6O75683 361 aaKnown RBP15.23■□□□□ 0.03
SLC6A1-201ENST00000287766 TPM2P07951 284 aa15.23■□□□□ 0.03
SLC6A1-201ENST00000287766 KDM2BQ8NHM5 1336 aa15.23■□□□□ 0.03
SLC6A1-201ENST00000287766 CCDC61Q9Y6R9 512 aa15.23■□□□□ 0.03
SLC6A1-201ENST00000287766 DIAPH3Q9NSV4 1193 aa15.23■□□□□ 0.03
SLC6A1-201ENST00000287766 MPNDQ8N594 471 aa15.23■□□□□ 0.03
SLC6A1-201ENST00000287766 UBE2Q2Q8WVN8 375 aa15.22■□□□□ 0.03
SLC6A1-201ENST00000287766 K7ELQ4 463 aaPredicted RBP15.22■□□□□ 0.03
SLC6A1-201ENST00000287766 UBTFL1P0CB47 393 aaPredicted RBP15.22■□□□□ 0.03
SLC6A1-201ENST00000287766 ABTB2Q8N961 1025 aa15.22■□□□□ 0.03
SLC6A1-201ENST00000287766 MBD5Q9P267 1494 aa15.22■□□□□ 0.03
SLC6A1-201ENST00000287766 HSP90B1P14625 803 aaKnown RBP15.22■□□□□ 0.03
SLC6A1-201ENST00000287766 IL1RAPL2Q9NP60 686 aa15.22■□□□□ 0.03
SLC6A1-201ENST00000287766 NUCB2P80303 420 aa15.21■□□□□ 0.03
SLC6A1-201ENST00000287766 CFAP65Q6ZU64 1925 aaKnown RBP15.21■□□□□ 0.03
SLC6A1-201ENST00000287766 GPATCH3Q96I76 525 aa15.21■□□□□ 0.03
SLC6A1-201ENST00000287766 ZMYND15Q9H091 742 aa15.21■□□□□ 0.03
SLC6A1-201ENST00000287766 KDM5CP41229 1560 aa15.21■□□□□ 0.03
SLC6A1-201ENST00000287766 PSME1Q06323 249 aa15.21■□□□□ 0.02
SLC6A1-201ENST00000287766 BECN2A8MW95 431 aa15.2■□□□□ 0.02
SLC6A1-201ENST00000287766 C1orf141Q5JVX7 400 aa15.2■□□□□ 0.02
SLC6A1-201ENST00000287766 MAGI2Q86UL8 1455 aa15.2■□□□□ 0.02
SLC6A1-201ENST00000287766 MTERF4Q7Z6M4 381 aaKnown RBP15.2■□□□□ 0.02
SLC6A1-201ENST00000287766 CREBRFQ8IUR6 639 aa15.2■□□□□ 0.02
SLC6A1-201ENST00000287766 TSPYL6Q8N831 410 aa15.2■□□□□ 0.02
SLC6A1-201ENST00000287766 NCKAP5LQ9HCH0 1330 aa15.2■□□□□ 0.02
SLC6A1-201ENST00000287766 ESPNB1AK53 854 aa15.2■□□□□ 0.02
SLC6A1-201ENST00000287766 GOLGA6L19H0YKK7 550 aa15.2■□□□□ 0.02
SLC6A1-201ENST00000287766 RBM33Q96EV2 1170 aaKnown RBP15.2■□□□□ 0.02
SLC6A1-201ENST00000287766 MBIPQ9NS73 344 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms