RNA–Protein interactions for RNA: ENST00000283882.3

CFDP1-201, Transcript of craniofacial development protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFDP1, Length 1,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-201ENST00000283882 USP6P35125 1406 aa16.95■□□□□ 0.3
CFDP1-201ENST00000283882 KIF1AQ12756 1690 aa16.94■□□□□ 0.3
CFDP1-201ENST00000283882 XIRP1Q702N8 1843 aaKnown RBP16.93■□□□□ 0.3
CFDP1-201ENST00000283882 RGPD8O14715 1765 aaPredicted RBP16.93■□□□□ 0.3
CFDP1-201ENST00000283882 SSH2Q76I76 1423 aa16.93■□□□□ 0.3
CFDP1-201ENST00000283882 C14orf37Q86TY3 774 aa16.92■□□□□ 0.3
CFDP1-201ENST00000283882 ACEP12821 1306 aa16.92■□□□□ 0.3
CFDP1-201ENST00000283882 MSH6P52701 1360 aa16.91■□□□□ 0.3
CFDP1-201ENST00000283882 MRS2Q9HD23 443 aa16.91■□□□□ 0.3
CFDP1-201ENST00000283882 ZNF335Q9H4Z2 1342 aaPredicted RBP16.91■□□□□ 0.3
CFDP1-201ENST00000283882 MST1RQ04912 1400 aa16.9■□□□□ 0.3
CFDP1-201ENST00000283882 C1orf167Q5SNV9 1468 aa16.9■□□□□ 0.3
CFDP1-201ENST00000283882 USP54Q70EL1 1684 aa16.9■□□□□ 0.3
CFDP1-201ENST00000283882 TTC21AQ8NDW8 1320 aa16.9■□□□□ 0.3
CFDP1-201ENST00000283882 FYB1O15117 783 aa16.89■□□□□ 0.29
CFDP1-201ENST00000283882 PPP2R1AP30153 589 aa16.89■□□□□ 0.29
CFDP1-201ENST00000283882 CADPS2Q86UW7 1296 aa16.88■□□□□ 0.29
CFDP1-201ENST00000283882 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
CFDP1-201ENST00000283882 PHF8Q9UPP1 1060 aa16.88■□□□□ 0.29
CFDP1-201ENST00000283882 INSRP06213 1382 aa16.88■□□□□ 0.29
CFDP1-201ENST00000283882 NUTM2FA1L443 756 aa16.87■□□□□ 0.29
CFDP1-201ENST00000283882 ATF3P18847 181 aa16.87■□□□□ 0.29
CFDP1-201ENST00000283882 RBM33Q96EV2 1170 aaKnown RBP16.87■□□□□ 0.29
CFDP1-201ENST00000283882 TTC21BQ7Z4L5 1316 aa16.87■□□□□ 0.29
CFDP1-201ENST00000283882 OVOS2A0A0J9YW53 1432 aa16.87■□□□□ 0.29
CFDP1-201ENST00000283882 OVOS2Q6IE36 1432 aa16.87■□□□□ 0.29
CFDP1-201ENST00000283882 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
CFDP1-201ENST00000283882 NGDNQ8NEJ9 315 aaKnown RBP16.86■□□□□ 0.29
CFDP1-201ENST00000283882 CNGB1Q14028 1251 aaPredicted RBP16.85■□□□□ 0.29
CFDP1-201ENST00000283882 USP31Q70CQ4 1352 aa16.85■□□□□ 0.29
CFDP1-201ENST00000283882 LTBP4Q8N2S1 1624 aa16.85■□□□□ 0.29
CFDP1-201ENST00000283882 AATKQ6ZMQ8 1374 aa16.84■□□□□ 0.29
CFDP1-201ENST00000283882 PIK3C2AO00443 1686 aa16.83■□□□□ 0.28
CFDP1-201ENST00000283882 SMG6Q86US8 1419 aaKnown RBP16.83■□□□□ 0.28
CFDP1-201ENST00000283882 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.28
CFDP1-201ENST00000283882 PNISRQ8TF01 805 aaKnown RBP16.83■□□□□ 0.28
CFDP1-201ENST00000283882 GGNBP2Q9H3C7 697 aa16.83■□□□□ 0.28
CFDP1-201ENST00000283882 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.82■□□□□ 0.287e-8■■■□□ 18.6
CFDP1-201ENST00000283882 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
CFDP1-201ENST00000283882 ESCO1Q5FWF5 840 aa16.81■□□□□ 0.28
CFDP1-201ENST00000283882 NME9Q86XW9 330 aa16.81■□□□□ 0.28
CFDP1-201ENST00000283882 TRPM3Q9HCF6 1732 aaPredicted RBP16.8■□□□□ 0.28
CFDP1-201ENST00000283882 COG3Q96JB2 828 aa16.8■□□□□ 0.28
CFDP1-201ENST00000283882 PNPLA6Q8IY17 1366 aa16.77■□□□□ 0.28
CFDP1-201ENST00000283882 MARF1Q9Y4F3 1742 aaKnown RBP16.77■□□□□ 0.28
CFDP1-201ENST00000283882 ORAI2Q96SN7 254 aa16.77■□□□□ 0.28
CFDP1-201ENST00000283882 COL3A1P02461 1466 aaPredicted RBP16.77■□□□□ 0.28
CFDP1-201ENST00000283882 CDK12Q9NYV4 1490 aaPredicted RBP16.77■□□□□ 0.28
CFDP1-201ENST00000283882 CFAP53Q96M91 514 aa16.76■□□□□ 0.27
CFDP1-201ENST00000283882 BLMP54132 1417 aaPredicted RBP16.76■□□□□ 0.27
CFDP1-201ENST00000283882 SBNO1A3KN83 1393 aa16.76■□□□□ 0.27
CFDP1-201ENST00000283882 SHPRHQ149N8 1683 aa16.75■□□□□ 0.27
CFDP1-201ENST00000283882 NPHP3Q7Z494 1330 aa16.75■□□□□ 0.27
CFDP1-201ENST00000283882 ALS2Q96Q42 1657 aa16.75■□□□□ 0.27
CFDP1-201ENST00000283882 MTHFSP49914 203 aa16.74■□□□□ 0.27
CFDP1-201ENST00000283882 PSME1Q06323 249 aa16.74■□□□□ 0.27
CFDP1-201ENST00000283882 FAM9BQ8IZU0 186 aa16.74■□□□□ 0.27
CFDP1-201ENST00000283882 YTHDC1Q96MU7 727 aaKnown RBP16.74■□□□□ 0.27
CFDP1-201ENST00000283882 KIF24Q5T7B8 1368 aa16.74■□□□□ 0.27
CFDP1-201ENST00000283882 PXDNQ92626 1479 aa16.73■□□□□ 0.27
CFDP1-201ENST00000283882 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
CFDP1-201ENST00000283882 IQSEC2Q5JU85 1478 aa16.73■□□□□ 0.27
CFDP1-201ENST00000283882 SLIT3O75094 1523 aa16.72■□□□□ 0.27
CFDP1-201ENST00000283882 NHSL1Q5SYE7 1610 aa16.72■□□□□ 0.27
CFDP1-201ENST00000283882 CENPBP07199 599 aaPredicted RBP16.72■□□□□ 0.27
CFDP1-201ENST00000283882 TNNT2P45379 298 aaPredicted RBP16.72■□□□□ 0.27
CFDP1-201ENST00000283882 SLAIN2Q9P270 581 aa16.72■□□□□ 0.27
CFDP1-201ENST00000283882 ZRANB1Q9UGI0 708 aa16.72■□□□□ 0.27
CFDP1-201ENST00000283882 MAP2P11137 1827 aaKnown RBP16.71■□□□□ 0.27
CFDP1-201ENST00000283882 FOXO3O43524 673 aa16.71■□□□□ 0.27
CFDP1-201ENST00000283882 ABCB7O75027 752 aa16.71■□□□□ 0.27
CFDP1-201ENST00000283882 WDR43Q15061 677 aaKnown RBP eCLIP16.71■□□□□ 0.27
CFDP1-201ENST00000283882 BRINP3Q76B58 766 aa16.71■□□□□ 0.27
CFDP1-201ENST00000283882 POLKQ9UBT6 870 aa16.71■□□□□ 0.27
CFDP1-201ENST00000283882 MED1Q15648 1581 aaPredicted RBP16.71■□□□□ 0.27
CFDP1-201ENST00000283882 KRT28Q7Z3Y7 464 aa16.7■□□□□ 0.26
CFDP1-201ENST00000283882 PHRF1Q9P1Y6 1649 aaKnown RBP16.7■□□□□ 0.26
CFDP1-201ENST00000283882 NFAT5O94916 1531 aa16.7■□□□□ 0.26
CFDP1-201ENST00000283882 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
CFDP1-201ENST00000283882 USP19O94966 1318 aa16.7■□□□□ 0.26
CFDP1-201ENST00000283882 KCNA4P22459 653 aa16.69■□□□□ 0.26
CFDP1-201ENST00000283882 NLRP6P59044 892 aa16.69■□□□□ 0.26
CFDP1-201ENST00000283882 ABTB2Q8N961 1025 aa16.69■□□□□ 0.26
CFDP1-201ENST00000283882 RTL1A6NKG5 1358 aa16.68■□□□□ 0.26
CFDP1-201ENST00000283882 ZBED9Q6R2W3 1325 aa16.68■□□□□ 0.26
CFDP1-201ENST00000283882 ARHGEF10O15013 1369 aa16.67■□□□□ 0.26
CFDP1-201ENST00000283882 PAK3O75914 559 aaPredicted RBP16.67■□□□□ 0.26
CFDP1-201ENST00000283882 HNRNPUQ00839 825 aaKnown RBP eCLIP16.67■□□□□ 0.26
CFDP1-201ENST00000283882 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
CFDP1-201ENST00000283882 SOS2Q07890 1332 aaPredicted RBP16.67■□□□□ 0.26
CFDP1-201ENST00000283882 AHDC1Q5TGY3 1603 aaPredicted RBP16.67■□□□□ 0.26
CFDP1-201ENST00000283882 KCNH5Q8NCM2 988 aa16.66■□□□□ 0.26
CFDP1-201ENST00000283882 PEAK1Q9H792 1746 aa16.66■□□□□ 0.26
CFDP1-201ENST00000283882 FLT4P35916 1363 aa16.65■□□□□ 0.26
CFDP1-201ENST00000283882 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
CFDP1-201ENST00000283882 EMILIN1Q9Y6C2 1016 aa16.65■□□□□ 0.26
CFDP1-201ENST00000283882 DIAPH1O60610 1272 aaKnown RBP16.64■□□□□ 0.25
CFDP1-201ENST00000283882 CRYBG1Q9Y4K1 1723 aa16.64■□□□□ 0.25
CFDP1-201ENST00000283882 ABCC6O95255 1503 aa16.64■□□□□ 0.25
CFDP1-201ENST00000283882 SPATA31A3Q5VYP0 1347 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms