RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 CD163L1Q9NR16 1453 aa24.28■■□□□ 1.48
ATG3-201ENST00000283290 MEX3CQ5U5Q3 659 aaKnown RBP24.28■■□□□ 1.48
ATG3-201ENST00000283290 MARF1Q9Y4F3 1742 aaKnown RBP24.26■■□□□ 1.47
ATG3-201ENST00000283290 NUTM2GQ5VZR2 741 aa24.26■■□□□ 1.47
ATG3-201ENST00000283290 MON2Q7Z3U7 1717 aa24.26■■□□□ 1.47
ATG3-201ENST00000283290 ARHGEF10O15013 1369 aa24.25■■□□□ 1.47
ATG3-201ENST00000283290 ADAMTS2O95450 1211 aa24.24■■□□□ 1.47
ATG3-201ENST00000283290 RGS17Q9UGC6 210 aaPredicted RBP24.24■■□□□ 1.47
ATG3-201ENST00000283290 CRYBG1Q9Y4K1 1723 aa24.23■■□□□ 1.47
ATG3-201ENST00000283290 A0A1W2PP64 1363 aa24.23■■□□□ 1.47
ATG3-201ENST00000283290 USP6P35125 1406 aa24.23■■□□□ 1.47
ATG3-201ENST00000283290 SLC24A1O60721 1099 aa24.22■■□□□ 1.47
ATG3-201ENST00000283290 CPSF1Q10570 1443 aaKnown RBP24.22■■□□□ 1.47
ATG3-201ENST00000283290 NRKQ7Z2Y5 1582 aa24.22■■□□□ 1.47
ATG3-201ENST00000283290 CABLES1Q8TDN4 633 aa24.22■■□□□ 1.47
ATG3-201ENST00000283290 KIF7Q2M1P5 1343 aa24.22■■□□□ 1.47
ATG3-201ENST00000283290 KTN1Q86UP2 1357 aaKnown RBP24.22■■□□□ 1.47
ATG3-201ENST00000283290 PUS7Q96PZ0 661 aaKnown RBP24.21■■□□□ 1.47
ATG3-201ENST00000283290 CDCA8Q53HL2 280 aa24.2■■□□□ 1.47
ATG3-201ENST00000283290 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.2■■□□□ 1.46
ATG3-201ENST00000283290 C8orf37Q96NL8 207 aa24.19■■□□□ 1.46
ATG3-201ENST00000283290 PIK3C2AO00443 1686 aa24.19■■□□□ 1.46
ATG3-201ENST00000283290 PHRF1Q9P1Y6 1649 aaKnown RBP24.17■■□□□ 1.46
ATG3-201ENST00000283290 HDGFL2Q7Z4V5 671 aaPredicted RBP24.17■■□□□ 1.46
ATG3-201ENST00000283290 WASHC2AQ641Q2 1341 aa24.17■■□□□ 1.46
ATG3-201ENST00000283290 ZRANB1Q9UGI0 708 aa24.16■■□□□ 1.46
ATG3-201ENST00000283290 SSH2Q76I76 1423 aa24.16■■□□□ 1.46
ATG3-201ENST00000283290 HAP1P54257 671 aaPredicted RBP24.16■■□□□ 1.46
ATG3-201ENST00000283290 TERF2IPQ9NYB0 399 aa24.16■■□□□ 1.46
ATG3-201ENST00000283290 BRD4O60885 1362 aaPredicted RBP24.15■■□□□ 1.46
ATG3-201ENST00000283290 AFF2P51816 1311 aa24.15■■□□□ 1.46
ATG3-201ENST00000283290 TTC21BQ7Z4L5 1316 aa24.15■■□□□ 1.46
ATG3-201ENST00000283290 ABTB2Q8N961 1025 aa24.15■■□□□ 1.46
ATG3-201ENST00000283290 ANKRD36BQ8N2N9 1353 aa24.14■■□□□ 1.46
ATG3-201ENST00000283290 CCDC7Q96M83 1385 aa24.14■■□□□ 1.46
ATG3-201ENST00000283290 ILDR2Q71H61 639 aa24.14■■□□□ 1.45
ATG3-201ENST00000283290 ZNF692Q9BU19 519 aaPredicted RBP24.14■■□□□ 1.45
ATG3-201ENST00000283290 NINLQ9Y2I6 1382 aa24.13■■□□□ 1.45
ATG3-201ENST00000283290 POTEAQ6S8J7 498 aa24.12■■□□□ 1.45
ATG3-201ENST00000283290 NME9Q86XW9 330 aa24.12■■□□□ 1.45
ATG3-201ENST00000283290 NGLY1Q96IV0 654 aa24.12■■□□□ 1.45
ATG3-201ENST00000283290 CARD14Q9BXL6 1004 aa24.12■■□□□ 1.45
ATG3-201ENST00000283290 PLCH1Q4KWH8 1693 aa24.11■■□□□ 1.45
ATG3-201ENST00000283290 PANK3Q9H999 370 aa24.09■■□□□ 1.45
ATG3-201ENST00000283290 EDC4Q6P2E9 1401 aaKnown RBP24.09■■□□□ 1.45
ATG3-201ENST00000283290 SOX12O15370 315 aa24.08■■□□□ 1.45
ATG3-201ENST00000283290 NLRP6P59044 892 aa24.08■■□□□ 1.45
ATG3-201ENST00000283290 ZNF772Q68DY9 489 aaPredicted RBP24.08■■□□□ 1.45
ATG3-201ENST00000283290 NSD3Q9BZ95 1437 aa24.08■■□□□ 1.45
ATG3-201ENST00000283290 KIF20BQ96Q89 1820 aa24.08■■□□□ 1.44
ATG3-201ENST00000283290 USP19O94966 1318 aa24.06■■□□□ 1.44
ATG3-201ENST00000283290 FNBP4Q8N3X1 1017 aaPredicted RBP24.06■■□□□ 1.44
ATG3-201ENST00000283290 TTC21AQ8NDW8 1320 aa24.05■■□□□ 1.44
ATG3-201ENST00000283290 NLRP13Q86W25 1043 aa24.05■■□□□ 1.44
ATG3-201ENST00000283290 SLIT2O94813 1529 aa24.05■■□□□ 1.44
ATG3-201ENST00000283290 COL14A1Q05707 1796 aaKnown RBP24.04■■□□□ 1.44
ATG3-201ENST00000283290 USP21Q9UK80 565 aa24.04■■□□□ 1.44
ATG3-201ENST00000283290 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.04■■□□□ 1.44
ATG3-201ENST00000283290 NWD2Q9ULI1 1742 aa24.04■■□□□ 1.44
ATG3-201ENST00000283290 BCL9LQ86UU0 1499 aa24.04■■□□□ 1.44
ATG3-201ENST00000283290 SLIT3O75094 1523 aa24.03■■□□□ 1.44
ATG3-201ENST00000283290 FAM83GA6ND36 823 aa24.03■■□□□ 1.44
ATG3-201ENST00000283290 GGNBP2Q9H3C7 697 aa24.03■■□□□ 1.44
ATG3-201ENST00000283290 USP54Q70EL1 1684 aa24.02■■□□□ 1.44
ATG3-201ENST00000283290 ZBTB7CA1YPR0 619 aa24.02■■□□□ 1.44
ATG3-201ENST00000283290 ZC3H6P61129 1189 aaKnown RBP24.02■■□□□ 1.44
ATG3-201ENST00000283290 CNGB1Q14028 1251 aaPredicted RBP24.02■■□□□ 1.44
ATG3-201ENST00000283290 KIAA0232Q92628 1395 aa24.01■■□□□ 1.43
ATG3-201ENST00000283290 NRAPQ86VF7 1730 aa24.01■■□□□ 1.43
ATG3-201ENST00000283290 FBLN1P23142 703 aa24■■□□□ 1.43
ATG3-201ENST00000283290 QTRT2Q9H974 415 aaKnown RBP24■■□□□ 1.43
ATG3-201ENST00000283290 FYB1O15117 783 aa23.99■■□□□ 1.43
ATG3-201ENST00000283290 GCP02774 474 aa23.99■■□□□ 1.43
ATG3-201ENST00000283290 PRDM11Q9NQV5 511 aa23.99■■□□□ 1.43
ATG3-201ENST00000283290 ATRNO75882 1429 aa23.98■■□□□ 1.43
ATG3-201ENST00000283290 CHRNA2Q15822 529 aa23.98■■□□□ 1.43
ATG3-201ENST00000283290 OVOS2A0A0J9YW53 1432 aa23.97■■□□□ 1.43
ATG3-201ENST00000283290 OVOS2Q6IE36 1432 aa23.97■■□□□ 1.43
ATG3-201ENST00000283290 UNC5CLQ8IV45 518 aa23.96■■□□□ 1.43
ATG3-201ENST00000283290 USP31Q70CQ4 1352 aa23.96■■□□□ 1.43
ATG3-201ENST00000283290 BTG4Q9NY30 223 aa23.95■■□□□ 1.43
ATG3-201ENST00000283290 TRPC5Q9UL62 973 aaPredicted RBP23.95■■□□□ 1.43
ATG3-201ENST00000283290 CPDO75976 1380 aa23.95■■□□□ 1.42
ATG3-201ENST00000283290 LTN1O94822 1766 aa23.95■■□□□ 1.42
ATG3-201ENST00000283290 LMO7Q8WWI1 1683 aa23.95■■□□□ 1.42
ATG3-201ENST00000283290 RGPD5Q99666 1765 aa23.95■■□□□ 1.42
ATG3-201ENST00000283290 NFAT5O94916 1531 aa23.94■■□□□ 1.42
ATG3-201ENST00000283290 RXRBP28702 533 aa23.94■■□□□ 1.42
ATG3-201ENST00000283290 ANKRD26Q9UPS8 1709 aa23.93■■□□□ 1.42
ATG3-201ENST00000283290 COG3Q96JB2 828 aa23.92■■□□□ 1.42
ATG3-201ENST00000283290 CGNL1Q0VF96 1302 aa23.91■■□□□ 1.42
ATG3-201ENST00000283290 RBM6P78332 1123 aaKnown RBP23.91■■□□□ 1.42
ATG3-201ENST00000283290 DDX10Q13206 875 aaKnown RBP23.91■■□□□ 1.42
ATG3-201ENST00000283290 GLI3P10071 1580 aa23.91■■□□□ 1.42
ATG3-201ENST00000283290 TNNT2P45379 298 aaPredicted RBP23.91■■□□□ 1.42
ATG3-201ENST00000283290 KNSTRNQ9Y448 316 aa23.91■■□□□ 1.42
ATG3-201ENST00000283290 COL18A1P39060 1754 aa23.91■■□□□ 1.42
ATG3-201ENST00000283290 CAMTA1Q9Y6Y1 1673 aa23.9■■□□□ 1.42
ATG3-201ENST00000283290 PER1O15534 1290 aaPredicted RBP23.9■■□□□ 1.42
ATG3-201ENST00000283290 KCNH5Q8NCM2 988 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms