RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 AAMPQ13685 434 aa9.4□□□□□ -0.9
SPARCL1-201ENST00000282470 MYH16Q9H6N6 1097 aa9.4□□□□□ -0.9
SPARCL1-201ENST00000282470 NOP58Q9Y2X3 529 aaKnown RBP9.4□□□□□ -0.9
SPARCL1-201ENST00000282470 RRP7AQ9Y3A4 280 aaKnown RBP9.4□□□□□ -0.9
SPARCL1-201ENST00000282470 TOPAZ1Q8N9V7 1692 aa9.4□□□□□ -0.91
SPARCL1-201ENST00000282470 VIRMAQ69YN4 1812 aaKnown RBP9.39□□□□□ -0.91
SPARCL1-201ENST00000282470 CT47B1P0C2W7 299 aaPredicted RBP9.39□□□□□ -0.91
SPARCL1-201ENST00000282470 MLECQ14165 292 aa9.39□□□□□ -0.91
SPARCL1-201ENST00000282470 ERICH6Q7L0X2 663 aa9.39□□□□□ -0.91
SPARCL1-201ENST00000282470 BCL11AQ9H165 835 aa9.39□□□□□ -0.91
SPARCL1-201ENST00000282470 TMEM2Q9UHN6 1383 aa9.39□□□□□ -0.91
SPARCL1-201ENST00000282470 MAP2P11137 1827 aaKnown RBP9.39□□□□□ -0.91
SPARCL1-201ENST00000282470 LRRC7Q96NW7 1537 aa9.39□□□□□ -0.91
SPARCL1-201ENST00000282470 WAPLQ7Z5K2 1190 aa9.39□□□□□ -0.91
SPARCL1-201ENST00000282470 IL16Q14005 1332 aa9.39□□□□□ -0.91
SPARCL1-201ENST00000282470 NRKQ7Z2Y5 1582 aa9.39□□□□□ -0.91
SPARCL1-201ENST00000282470 WASLO00401 505 aaPredicted RBP9.38□□□□□ -0.91
SPARCL1-201ENST00000282470 HDGFP51858 240 aaKnown RBP9.38□□□□□ -0.91
SPARCL1-201ENST00000282470 SENP3Q9H4L4 574 aaPredicted RBP9.38□□□□□ -0.91
SPARCL1-201ENST00000282470 PPIP5K1Q6PFW1 1433 aa9.38□□□□□ -0.91
SPARCL1-201ENST00000282470 NEUROD2Q15784 382 aa9.38□□□□□ -0.91
SPARCL1-201ENST00000282470 CDK12Q9NYV4 1490 aaPredicted RBP9.38□□□□□ -0.91
SPARCL1-201ENST00000282470 ESF1Q9H501 851 aaKnown RBP9.38□□□□□ -0.91
SPARCL1-201ENST00000282470 ADAMTS13Q76LX8 1427 aa9.38□□□□□ -0.91
SPARCL1-201ENST00000282470 AATKQ6ZMQ8 1374 aa9.37□□□□□ -0.91
SPARCL1-201ENST00000282470 TMPOP42166 694 aaKnown RBP9.37□□□□□ -0.91
SPARCL1-201ENST00000282470 PNNQ9H307 717 aaKnown RBP9.37□□□□□ -0.91
SPARCL1-201ENST00000282470 DIAPH1O60610 1272 aaKnown RBP9.37□□□□□ -0.91
SPARCL1-201ENST00000282470 TRIM35Q9UPQ4 493 aa9.37□□□□□ -0.91
SPARCL1-201ENST00000282470 PLEKHG1Q9ULL1 1385 aa9.37□□□□□ -0.91
SPARCL1-201ENST00000282470 CLUAP1Q96AJ1 413 aa9.36□□□□□ -0.91
SPARCL1-201ENST00000282470 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.36□□□□□ -0.91
SPARCL1-201ENST00000282470 SLIT1O75093 1534 aa9.36□□□□□ -0.91
SPARCL1-201ENST00000282470 U2SURPO15042 1029 aaKnown RBP9.35□□□□□ -0.91
SPARCL1-201ENST00000282470 POLKQ9UBT6 870 aa9.35□□□□□ -0.91
SPARCL1-201ENST00000282470 MAPK8IP3Q9UPT6 1336 aa9.35□□□□□ -0.91
SPARCL1-201ENST00000282470 FCHSD2O94868 740 aa9.35□□□□□ -0.91
SPARCL1-201ENST00000282470 NALCNQ8IZF0 1738 aa9.35□□□□□ -0.91
SPARCL1-201ENST00000282470 ARHGAP23Q9P227 1491 aa9.35□□□□□ -0.91
SPARCL1-201ENST00000282470 PAK3O75914 559 aaPredicted RBP9.35□□□□□ -0.91
SPARCL1-201ENST00000282470 CANXP27824 592 aaKnown RBP9.35□□□□□ -0.91
SPARCL1-201ENST00000282470 SKAP1Q86WV1 359 aa9.35□□□□□ -0.91
SPARCL1-201ENST00000282470 PANK1Q8TE04 598 aa9.35□□□□□ -0.91
SPARCL1-201ENST00000282470 DIP2AQ14689 1571 aa9.34□□□□□ -0.91
SPARCL1-201ENST00000282470 NUDT16Q96DE0 195 aaKnown RBP9.34□□□□□ -0.91
SPARCL1-201ENST00000282470 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
SPARCL1-201ENST00000282470 ROBO2Q9HCK4 1378 aa9.34□□□□□ -0.91
SPARCL1-201ENST00000282470 COG6Q9Y2V7 657 aa9.34□□□□□ -0.91
SPARCL1-201ENST00000282470 FER1L4A9Z1Z3 1794 aa9.33□□□□□ -0.92
SPARCL1-201ENST00000282470 IGHDP01880 384 aa9.33□□□□□ -0.92
SPARCL1-201ENST00000282470 TXNDC2Q86VQ3 553 aa9.33□□□□□ -0.92
SPARCL1-201ENST00000282470 CCDC61Q9Y6R9 512 aa9.33□□□□□ -0.92
SPARCL1-201ENST00000282470 RIMS1Q86UR5 1692 aaKnown RBP9.33□□□□□ -0.92
SPARCL1-201ENST00000282470 FAM161AQ3B820 660 aa9.33□□□□□ -0.92
SPARCL1-201ENST00000282470 C8orf34Q49A92 452 aa9.33□□□□□ -0.92
SPARCL1-201ENST00000282470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.33□□□□□ -0.92
SPARCL1-201ENST00000282470 ZBTB47Q9UFB7 747 aaPredicted RBP9.33□□□□□ -0.92
SPARCL1-201ENST00000282470 RLBP1P12271 317 aa9.32□□□□□ -0.92
SPARCL1-201ENST00000282470 FRAT1Q92837 279 aaPredicted RBP9.32□□□□□ -0.92
SPARCL1-201ENST00000282470 ZNF692Q9BU19 519 aaPredicted RBP9.32□□□□□ -0.92
SPARCL1-201ENST00000282470 PRR36Q9H6K5 1346 aa9.32□□□□□ -0.92
SPARCL1-201ENST00000282470 RIPK4P57078 832 aa9.32□□□□□ -0.92
SPARCL1-201ENST00000282470 PMFBP1Q8TBY8 1022 aa9.32□□□□□ -0.92
SPARCL1-201ENST00000282470 DLG5Q8TDM6 1919 aa9.31□□□□□ -0.92
SPARCL1-201ENST00000282470 PTCH1Q13635 1447 aa9.31□□□□□ -0.92
SPARCL1-201ENST00000282470 IL13P35225 146 aa9.31□□□□□ -0.92
SPARCL1-201ENST00000282470 ZKSCAN2Q63HK3 967 aa9.31□□□□□ -0.92
SPARCL1-201ENST00000282470 TSR2Q969E8 191 aaKnown RBP9.31□□□□□ -0.92
SPARCL1-201ENST00000282470 EXOSC9Q06265 439 aaKnown RBP9.31□□□□□ -0.92
SPARCL1-201ENST00000282470 MVPQ14764 893 aaKnown RBP9.31□□□□□ -0.92
SPARCL1-201ENST00000282470 NME9Q86XW9 330 aa9.31□□□□□ -0.92
SPARCL1-201ENST00000282470 OVOS2A0A0J9YW53 1432 aa9.31□□□□□ -0.92
SPARCL1-201ENST00000282470 OVOS2Q6IE36 1432 aa9.31□□□□□ -0.92
SPARCL1-201ENST00000282470 PTPRUQ92729 1446 aa9.31□□□□□ -0.92
SPARCL1-201ENST00000282470 RGPD1P0DJD0 1748 aa9.3□□□□□ -0.92
SPARCL1-201ENST00000282470 XRN1Q8IZH2 1706 aaKnown RBP9.3□□□□□ -0.92
SPARCL1-201ENST00000282470 LTKP29376 864 aa9.3□□□□□ -0.92
SPARCL1-201ENST00000282470 BCL2L13Q9BXK5 485 aa9.3□□□□□ -0.92
SPARCL1-201ENST00000282470 TNNQ9UQP3 1299 aa9.3□□□□□ -0.92
SPARCL1-201ENST00000282470 PRKCSHP14314 528 aaPredicted RBP9.29□□□□□ -0.92
SPARCL1-201ENST00000282470 PRKAR2BP31323 418 aa9.29□□□□□ -0.92
SPARCL1-201ENST00000282470 BRPF1P55201 1214 aaPredicted RBP9.29□□□□□ -0.92
SPARCL1-201ENST00000282470 NFE2L2Q16236 605 aa9.29□□□□□ -0.92
SPARCL1-201ENST00000282470 ZNF428Q96B54 188 aa9.29□□□□□ -0.92
SPARCL1-201ENST00000282470 DDRGK1Q96HY6 314 aa9.29□□□□□ -0.92
SPARCL1-201ENST00000282470 COG3Q96JB2 828 aa9.29□□□□□ -0.92
SPARCL1-201ENST00000282470 SSH2Q76I76 1423 aa9.29□□□□□ -0.92
SPARCL1-201ENST00000282470 ALDH1L2Q3SY69 923 aa9.29□□□□□ -0.92
SPARCL1-201ENST00000282470 NPM2Q86SE8 214 aaKnown RBP9.29□□□□□ -0.92
SPARCL1-201ENST00000282470 DZIP1LQ8IYY4 767 aaKnown RBP9.29□□□□□ -0.92
SPARCL1-201ENST00000282470 PCDHB15Q9Y5E8 787 aa9.29□□□□□ -0.92
SPARCL1-201ENST00000282470 EMILIN1Q9Y6C2 1016 aa9.29□□□□□ -0.92
SPARCL1-201ENST00000282470 USP6P35125 1406 aa9.29□□□□□ -0.92
SPARCL1-201ENST00000282470 PLEKHG3A1L390 1219 aa9.28□□□□□ -0.92
SPARCL1-201ENST00000282470 SSH1Q8WYL5 1049 aa9.28□□□□□ -0.92
SPARCL1-201ENST00000282470 SMC4Q9NTJ3 1288 aa9.28□□□□□ -0.92
SPARCL1-201ENST00000282470 KIF16BQ96L93 1317 aa9.28□□□□□ -0.92
SPARCL1-201ENST00000282470 NCKAP5LQ9HCH0 1330 aa9.28□□□□□ -0.92
SPARCL1-201ENST00000282470 PEAK1Q9H792 1746 aa9.28□□□□□ -0.92
SPARCL1-201ENST00000282470 CALD1Q05682 793 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms