RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 NOB1Q9ULX3 412 aaKnown RBP11.39□□□□□ -0.59
SEC16A-201ENST00000277537 PPRC1Q5VV67 1664 aaKnown RBP11.39□□□□□ -0.59
SEC16A-201ENST00000277537 EIF5BO60841 1220 aaKnown RBP11.39□□□□□ -0.59
SEC16A-201ENST00000277537 RARSP54136 660 aaKnown RBP11.39□□□□□ -0.59
SEC16A-201ENST00000277537 DDRGK1Q96HY6 314 aa11.38□□□□□ -0.59
SEC16A-201ENST00000277537 METP08581 1390 aa11.38□□□□□ -0.59
SEC16A-201ENST00000277537 SLC4A3P48751 1232 aa11.38□□□□□ -0.59
SEC16A-201ENST00000277537 STK31Q9BXU1 1019 aa11.38□□□□□ -0.59
SEC16A-201ENST00000277537 NSD2O96028 1365 aa11.38□□□□□ -0.59
SEC16A-201ENST00000277537 PUS7Q96PZ0 661 aaKnown RBP11.38□□□□□ -0.59
SEC16A-201ENST00000277537 MIS18AQ9NYP9 233 aa11.38□□□□□ -0.59
SEC16A-201ENST00000277537 RIMBP3CA6NJZ7 1639 aa11.38□□□□□ -0.59
SEC16A-201ENST00000277537 RIMBP3BA6NNM3 1639 aa11.38□□□□□ -0.59
SEC16A-201ENST00000277537 MADDQ8WXG6 1647 aa11.38□□□□□ -0.59
SEC16A-201ENST00000277537 RIMBP3Q9UFD9 1639 aa11.38□□□□□ -0.59
SEC16A-201ENST00000277537 NPC1L1Q9UHC9 1359 aa11.37□□□□□ -0.59
SEC16A-201ENST00000277537 FAM83GA6ND36 823 aa11.37□□□□□ -0.59
SEC16A-201ENST00000277537 MSH5O43196 834 aa11.37□□□□□ -0.59
SEC16A-201ENST00000277537 KCNA6P17658 529 aa11.37□□□□□ -0.59
SEC16A-201ENST00000277537 HSP90AB2PQ58FF8 381 aa11.37□□□□□ -0.59
SEC16A-201ENST00000277537 MAP3K4Q9Y6R4 1608 aa11.37□□□□□ -0.59
SEC16A-201ENST00000277537 SBNO2Q9Y2G9 1366 aa11.37□□□□□ -0.59
SEC16A-201ENST00000277537 FOXO3O43524 673 aa11.37□□□□□ -0.59
SEC16A-201ENST00000277537 CHMP4BQ9H444 224 aaKnown RBP11.37□□□□□ -0.59
SEC16A-201ENST00000277537 NKTRP30414 1462 aaKnown RBP11.37□□□□□ -0.59
SEC16A-201ENST00000277537 PDE3AQ14432 1141 aa11.37□□□□□ -0.59
SEC16A-201ENST00000277537 NFE2L2Q16236 605 aa11.37□□□□□ -0.59
SEC16A-201ENST00000277537 MCM10Q7L590 875 aa11.37□□□□□ -0.59
SEC16A-201ENST00000277537 TSPYL4Q9UJ04 414 aa11.37□□□□□ -0.59
SEC16A-201ENST00000277537 FANCIQ9NVI1 1328 aa11.37□□□□□ -0.59
SEC16A-201ENST00000277537 NINLQ9Y2I6 1382 aa11.36□□□□□ -0.59
SEC16A-201ENST00000277537 SSH1Q8WYL5 1049 aa11.36□□□□□ -0.59
SEC16A-201ENST00000277537 IPO9Q96P70 1041 aaKnown RBP11.36□□□□□ -0.59
SEC16A-201ENST00000277537 ABCA6Q8N139 1617 aa11.36□□□□□ -0.59
SEC16A-201ENST00000277537 TWISTNBQ3B726 338 aaPredicted RBP11.36□□□□□ -0.59
SEC16A-201ENST00000277537 DDX19BQ9UMR2 479 aa11.36□□□□□ -0.59
SEC16A-201ENST00000277537 TNNQ9UQP3 1299 aa11.36□□□□□ -0.59
SEC16A-201ENST00000277537 EIF2S2P20042 333 aaKnown RBP11.36□□□□□ -0.59
SEC16A-201ENST00000277537 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
SEC16A-201ENST00000277537 ATF3P18847 181 aa11.35□□□□□ -0.59
SEC16A-201ENST00000277537 PHACTR3Q96KR7 559 aa11.35□□□□□ -0.59
SEC16A-201ENST00000277537 C1orf115Q9H7X2 142 aa11.35□□□□□ -0.59
SEC16A-201ENST00000277537 AEBP1Q8IUX7 1158 aa11.35□□□□□ -0.59
SEC16A-201ENST00000277537 TTC21BQ7Z4L5 1316 aa11.35□□□□□ -0.59
SEC16A-201ENST00000277537 TMEM2Q9UHN6 1383 aa11.35□□□□□ -0.59
SEC16A-201ENST00000277537 KDM5AP29375 1690 aaKnown RBP11.35□□□□□ -0.59
SEC16A-201ENST00000277537 DIP2CQ9Y2E4 1556 aa11.35□□□□□ -0.59
SEC16A-201ENST00000277537 PRKCSHP14314 528 aaPredicted RBP11.34□□□□□ -0.59
SEC16A-201ENST00000277537 FAM161AQ3B820 660 aa11.34□□□□□ -0.59
SEC16A-201ENST00000277537 USHBP1Q8N6Y0 703 aa11.34□□□□□ -0.59
SEC16A-201ENST00000277537 KIF16BQ96L93 1317 aa11.34□□□□□ -0.59
SEC16A-201ENST00000277537 ANKRD45Q5TZF3 282 aa11.34□□□□□ -0.59
SEC16A-201ENST00000277537 ARHGAP31Q2M1Z3 1444 aa11.34□□□□□ -0.59
SEC16A-201ENST00000277537 ATF7IPQ6VMQ6 1270 aa11.33□□□□□ -0.6
SEC16A-201ENST00000277537 MFAP1P55081 439 aaKnown RBP11.33□□□□□ -0.6
SEC16A-201ENST00000277537 PHF8Q9UPP1 1060 aa11.33□□□□□ -0.6
SEC16A-201ENST00000277537 TEFQ10587 303 aa11.33□□□□□ -0.6
SEC16A-201ENST00000277537 LNPKQ9C0E8 428 aa11.33□□□□□ -0.6
SEC16A-201ENST00000277537 BECN1Q14457 450 aa11.32□□□□□ -0.6
SEC16A-201ENST00000277537 BLMP54132 1417 aaPredicted RBP11.32□□□□□ -0.6
SEC16A-201ENST00000277537 ABCC11Q96J66 1382 aa11.32□□□□□ -0.6
SEC16A-201ENST00000277537 ZC3H6P61129 1189 aaKnown RBP11.32□□□□□ -0.6
SEC16A-201ENST00000277537 ADGRB3O60242 1522 aa11.32□□□□□ -0.6
SEC16A-201ENST00000277537 LMTK2Q8IWU2 1503 aa11.31□□□□□ -0.6
SEC16A-201ENST00000277537 MVPQ14764 893 aaKnown RBP11.31□□□□□ -0.6
SEC16A-201ENST00000277537 TMEM57Q8N5G2 664 aa11.31□□□□□ -0.6
SEC16A-201ENST00000277537 NLRP2Q9NX02 1062 aa11.31□□□□□ -0.6
SEC16A-201ENST00000277537 TBX22Q9Y458 520 aa11.31□□□□□ -0.6
SEC16A-201ENST00000277537 SYNMO15061 1565 aa11.3□□□□□ -0.6
SEC16A-201ENST00000277537 FKBP5Q13451 457 aaPredicted RBP11.3□□□□□ -0.6
SEC16A-201ENST00000277537 C1orf141Q5JVX7 400 aa11.3□□□□□ -0.6
SEC16A-201ENST00000277537 FRMPD1Q5SYB0 1578 aa11.3□□□□□ -0.6
SEC16A-201ENST00000277537 OS9Q13438 667 aaPredicted RBP11.3□□□□□ -0.6
SEC16A-201ENST00000277537 PDZRN3Q9UPQ7 1066 aa11.3□□□□□ -0.6
SEC16A-201ENST00000277537 RNF123Q5XPI4 1314 aa11.3□□□□□ -0.6
SEC16A-201ENST00000277537 EIF4A2Q14240 407 aaKnown RBP11.3□□□□□ -0.6
SEC16A-201ENST00000277537 IGHDP01880 384 aa11.29□□□□□ -0.6
SEC16A-201ENST00000277537 RLBP1P12271 317 aa11.29□□□□□ -0.6
SEC16A-201ENST00000277537 TRIM27P14373 513 aa11.29□□□□□ -0.6
SEC16A-201ENST00000277537 API5Q9BZZ5 524 aaKnown RBP11.29□□□□□ -0.6
SEC16A-201ENST00000277537 SLKQ9H2G2 1235 aaPredicted RBP11.29□□□□□ -0.6
SEC16A-201ENST00000277537 ZNF330Q9Y3S2 320 aaPredicted RBP11.29□□□□□ -0.6
SEC16A-201ENST00000277537 SLC4A2P04920 1241 aa11.29□□□□□ -0.6
SEC16A-201ENST00000277537 DNAJC5Q9H3Z4 198 aa11.29□□□□□ -0.6
SEC16A-201ENST00000277537 ZNF428Q96B54 188 aa11.29□□□□□ -0.6
SEC16A-201ENST00000277537 BACH2Q9BYV9 841 aa11.29□□□□□ -0.6
SEC16A-201ENST00000277537 A2ML1A8K2U0 1454 aa11.29□□□□□ -0.6
SEC16A-201ENST00000277537 GAS2L2Q8NHY3 880 aa11.29□□□□□ -0.6
SEC16A-201ENST00000277537 ZMYM4Q5VZL5 1548 aa11.28□□□□□ -0.6
SEC16A-201ENST00000277537 ROBO2Q9HCK4 1378 aa11.28□□□□□ -0.6
SEC16A-201ENST00000277537 HSPA2P54652 639 aa11.28□□□□□ -0.6
SEC16A-201ENST00000277537 MBIPQ9NS73 344 aa11.28□□□□□ -0.6
SEC16A-201ENST00000277537 CAMSAP1Q5T5Y3 1602 aa11.28□□□□□ -0.6
SEC16A-201ENST00000277537 RSPH6AQ9H0K4 717 aa11.28□□□□□ -0.6
SEC16A-201ENST00000277537 TRIM35Q9UPQ4 493 aa11.27□□□□□ -0.6
SEC16A-201ENST00000277537 KRT24Q2M2I5 525 aa11.27□□□□□ -0.61
SEC16A-201ENST00000277537 TSPYL6Q8N831 410 aa11.27□□□□□ -0.61
SEC16A-201ENST00000277537 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.27□□□□□ -0.61
SEC16A-201ENST00000277537 PRR36Q9H6K5 1346 aa11.27□□□□□ -0.61
SEC16A-201ENST00000277537 VWDEQ8N2E2 1590 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms