RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 WDR63Q8IWG1 891 aa26.1■■□□□ 1.77
RAB5A-201ENST00000273047 PLEKHF1Q96S99 279 aa26.1■■□□□ 1.77
RAB5A-201ENST00000273047 ZBTB47Q9UFB7 747 aaPredicted RBP26.09■■□□□ 1.77
RAB5A-201ENST00000273047 RLBP1P12271 317 aa26.09■■□□□ 1.77
RAB5A-201ENST00000273047 ZRANB1Q9UGI0 708 aa26.09■■□□□ 1.77
RAB5A-201ENST00000273047 SETD1AO15047 1707 aaKnown RBP26.06■■□□□ 1.76
RAB5A-201ENST00000273047 COL3A1P02461 1466 aaPredicted RBP26.06■■□□□ 1.76
RAB5A-201ENST00000273047 TMPOP42166 694 aaKnown RBP26.06■■□□□ 1.76
RAB5A-201ENST00000273047 CCDC27Q2M243 656 aa26.05■■□□□ 1.76
RAB5A-201ENST00000273047 RTL5Q5HYW3 569 aaPredicted RBP26.05■■□□□ 1.76
RAB5A-201ENST00000273047 TRIM35Q9UPQ4 493 aa26.05■■□□□ 1.76
RAB5A-201ENST00000273047 DIAPH1O60610 1272 aaKnown RBP26.04■■□□□ 1.76
RAB5A-201ENST00000273047 NRXN3Q9Y4C0 1643 aa26.03■■□□□ 1.76
RAB5A-201ENST00000273047 PDE3AQ14432 1141 aa26.03■■□□□ 1.76
RAB5A-201ENST00000273047 CEBPAP49715 358 aaPredicted RBP26.03■■□□□ 1.76
RAB5A-201ENST00000273047 NME9Q86XW9 330 aa26.03■■□□□ 1.76
RAB5A-201ENST00000273047 MAPK8IP3Q9UPT6 1336 aa26.02■■□□□ 1.76
RAB5A-201ENST00000273047 NUTM2FA1L443 756 aa26.02■■□□□ 1.76
RAB5A-201ENST00000273047 WASLO00401 505 aaPredicted RBP26.02■■□□□ 1.76
RAB5A-201ENST00000273047 POLKQ9UBT6 870 aa26.01■■□□□ 1.75
RAB5A-201ENST00000273047 RIPK4P57078 832 aa26■■□□□ 1.75
RAB5A-201ENST00000273047 MYH16Q9H6N6 1097 aa26■■□□□ 1.75
RAB5A-201ENST00000273047 EMILIN1Q9Y6C2 1016 aa26■■□□□ 1.75
RAB5A-201ENST00000273047 ANKRD26Q9UPS8 1709 aa26■■□□□ 1.75
RAB5A-201ENST00000273047 EXOSC9Q06265 439 aaKnown RBP26■■□□□ 1.75
RAB5A-201ENST00000273047 HMOX1P09601 288 aa25.99■■□□□ 1.75
RAB5A-201ENST00000273047 ADGRB2O60241 1585 aa25.99■■□□□ 1.75
RAB5A-201ENST00000273047 KIF20BQ96Q89 1820 aa25.99■■□□□ 1.75
RAB5A-201ENST00000273047 PPIP5K1Q6PFW1 1433 aa25.98■■□□□ 1.75
RAB5A-201ENST00000273047 NUDT16Q96DE0 195 aaKnown RBP25.97■■□□□ 1.75
RAB5A-201ENST00000273047 DLC1Q96QB1 1528 aa25.96■■□□□ 1.75
RAB5A-201ENST00000273047 C8orf34Q49A92 452 aa25.95■■□□□ 1.75
RAB5A-201ENST00000273047 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.95■■□□□ 1.75
RAB5A-201ENST00000273047 PCDHB15Q9Y5E8 787 aa25.95■■□□□ 1.75
RAB5A-201ENST00000273047 TNRQ92752 1358 aa25.95■■□□□ 1.75
RAB5A-201ENST00000273047 MED14O60244 1454 aa25.95■■□□□ 1.75
RAB5A-201ENST00000273047 PRKAR2BP31323 418 aa25.95■■□□□ 1.74
RAB5A-201ENST00000273047 MAP2P11137 1827 aaKnown RBP25.94■■□□□ 1.74
RAB5A-201ENST00000273047 RRS1Q15050 365 aaKnown RBP25.94■■□□□ 1.74
RAB5A-201ENST00000273047 PNPLA6Q8IY17 1366 aa25.94■■□□□ 1.74
RAB5A-201ENST00000273047 PHACTR3Q96KR7 559 aa25.93■■□□□ 1.74
RAB5A-201ENST00000273047 THUMPD2Q9BTF0 503 aaKnown RBP25.92■■□□□ 1.74
RAB5A-201ENST00000273047 LAS1LQ9Y4W2 734 aaKnown RBP25.92■■□□□ 1.74
RAB5A-201ENST00000273047 LTKP29376 864 aa25.92■■□□□ 1.74
RAB5A-201ENST00000273047 SLC26A8Q96RN1 970 aa25.91■■□□□ 1.74
RAB5A-201ENST00000273047 SMC4Q9NTJ3 1288 aa25.91■■□□□ 1.74
RAB5A-201ENST00000273047 ATP7BP35670 1465 aa25.9■■□□□ 1.74
RAB5A-201ENST00000273047 FAM161AQ3B820 660 aa25.9■■□□□ 1.74
RAB5A-201ENST00000273047 SSH1Q8WYL5 1049 aa25.9■■□□□ 1.74
RAB5A-201ENST00000273047 PRR36Q9H6K5 1346 aa25.9■■□□□ 1.74
RAB5A-201ENST00000273047 RSPH6AQ9H0K4 717 aa25.89■■□□□ 1.74
RAB5A-201ENST00000273047 ROBO2Q9HCK4 1378 aa25.89■■□□□ 1.74
RAB5A-201ENST00000273047 SLC4A3P48751 1232 aa25.89■■□□□ 1.73
RAB5A-201ENST00000273047 CCDC61Q9Y6R9 512 aa25.88■■□□□ 1.73
RAB5A-201ENST00000273047 TMEM2Q9UHN6 1383 aa25.88■■□□□ 1.73
RAB5A-201ENST00000273047 CPSF1Q10570 1443 aaKnown RBP25.88■■□□□ 1.73
RAB5A-201ENST00000273047 LRRC7Q96NW7 1537 aa25.88■■□□□ 1.73
RAB5A-201ENST00000273047 PRKCSHP14314 528 aaPredicted RBP25.88■■□□□ 1.73
RAB5A-201ENST00000273047 CPS1P31327 1500 aa25.87■■□□□ 1.73
RAB5A-201ENST00000273047 FTSJ3Q8IY81 847 aaKnown RBP25.86■■□□□ 1.73
RAB5A-201ENST00000273047 FCHSD2O94868 740 aa25.85■■□□□ 1.73
RAB5A-201ENST00000273047 ZKSCAN2Q63HK3 967 aa25.85■■□□□ 1.73
RAB5A-201ENST00000273047 ANO8Q9HCE9 1232 aaPredicted RBP25.85■■□□□ 1.73
RAB5A-201ENST00000273047 TRIM27P14373 513 aa25.84■■□□□ 1.73
RAB5A-201ENST00000273047 HDGFP51858 240 aaKnown RBP25.84■■□□□ 1.73
RAB5A-201ENST00000273047 EDC4Q6P2E9 1401 aaKnown RBP25.84■■□□□ 1.73
RAB5A-201ENST00000273047 UBR1Q8IWV7 1749 aa25.84■■□□□ 1.73
RAB5A-201ENST00000273047 NOB1Q9ULX3 412 aaKnown RBP25.83■■□□□ 1.73
RAB5A-201ENST00000273047 SOX12O15370 315 aa25.83■■□□□ 1.73
RAB5A-201ENST00000273047 DZIP1LQ8IYY4 767 aaKnown RBP25.83■■□□□ 1.73
RAB5A-201ENST00000273047 COG3Q96JB2 828 aa25.83■■□□□ 1.73
RAB5A-201ENST00000273047 MVPQ14764 893 aaKnown RBP25.82■■□□□ 1.72
RAB5A-201ENST00000273047 NCBP3Q53F19 620 aaKnown RBP25.82■■□□□ 1.72
RAB5A-201ENST00000273047 IL13P35225 146 aa25.81■■□□□ 1.72
RAB5A-201ENST00000273047 ADAMTS13Q76LX8 1427 aa25.81■■□□□ 1.72
RAB5A-201ENST00000273047 IL27Q8NEV9 243 aa25.81■■□□□ 1.72
RAB5A-201ENST00000273047 ELL2O00472 640 aaPredicted RBP25.8■■□□□ 1.72
RAB5A-201ENST00000273047 FAM135BQ49AJ0 1406 aa25.8■■□□□ 1.72
RAB5A-201ENST00000273047 ITPRIPQ8IWB1 547 aa25.79■■□□□ 1.72
RAB5A-201ENST00000273047 SEC24BO95487 1268 aa25.78■■□□□ 1.72
RAB5A-201ENST00000273047 FAM83GA6ND36 823 aa25.78■■□□□ 1.72
RAB5A-201ENST00000273047 PNNQ9H307 717 aaKnown RBP25.78■■□□□ 1.72
RAB5A-201ENST00000273047 NEFMP07197 916 aa25.77■■□□□ 1.72
RAB5A-201ENST00000273047 TECPR2O15040 1411 aa25.77■■□□□ 1.72
RAB5A-201ENST00000273047 CDC42BPGQ6DT37 1551 aa25.76■■□□□ 1.72
RAB5A-201ENST00000273047 DCTN1Q14203 1278 aa25.76■■□□□ 1.71
RAB5A-201ENST00000273047 PMFBP1Q8TBY8 1022 aa25.76■■□□□ 1.71
RAB5A-201ENST00000273047 PDZRN3Q9UPQ7 1066 aa25.76■■□□□ 1.71
RAB5A-201ENST00000273047 NFE2L2Q16236 605 aa25.76■■□□□ 1.71
RAB5A-201ENST00000273047 ATF7IPQ6VMQ6 1270 aa25.76■■□□□ 1.71
RAB5A-201ENST00000273047 ACEP12821 1306 aa25.76■■□□□ 1.71
RAB5A-201ENST00000273047 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.76■■□□□ 1.71
RAB5A-201ENST00000273047 IL16Q14005 1332 aa25.75■■□□□ 1.71
RAB5A-201ENST00000273047 TSPYL6Q8N831 410 aa25.75■■□□□ 1.71
RAB5A-201ENST00000273047 TMEM57Q8N5G2 664 aa25.75■■□□□ 1.71
RAB5A-201ENST00000273047 AEBP1Q8IUX7 1158 aa25.74■■□□□ 1.71
RAB5A-201ENST00000273047 USP35Q9P2H5 1018 aa25.74■■□□□ 1.71
RAB5A-201ENST00000273047 KNDC1Q76NI1 1749 aa25.73■■□□□ 1.71
RAB5A-201ENST00000273047 PTPRUQ92729 1446 aa25.73■■□□□ 1.71
RAB5A-201ENST00000273047 CT47B1P0C2W7 299 aaPredicted RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms