RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 TMF1P82094 1093 aa11.66□□□□□ -0.54
TRIM43-201ENST00000272395 PARD3Q8TEW0 1356 aa11.66□□□□□ -0.54
TRIM43-201ENST00000272395 CABP1Q9NZU7 370 aa11.65□□□□□ -0.54
TRIM43-201ENST00000272395 CCDC61Q9Y6R9 512 aa11.65□□□□□ -0.54
TRIM43-201ENST00000272395 PPIP5K1Q6PFW1 1433 aa11.65□□□□□ -0.55
TRIM43-201ENST00000272395 NLRP13Q86W25 1043 aa11.65□□□□□ -0.55
TRIM43-201ENST00000272395 RGPD8O14715 1765 aaPredicted RBP11.64□□□□□ -0.55
TRIM43-201ENST00000272395 ATAD2Q6PL18 1390 aa11.63□□□□□ -0.55
TRIM43-201ENST00000272395 NGDNQ8NEJ9 315 aaKnown RBP11.63□□□□□ -0.55
TRIM43-201ENST00000272395 ACEP12821 1306 aa11.62□□□□□ -0.55
TRIM43-201ENST00000272395 SLC12A5Q9H2X9 1139 aa11.62□□□□□ -0.55
TRIM43-201ENST00000272395 TOPAZ1Q8N9V7 1692 aa11.62□□□□□ -0.55
TRIM43-201ENST00000272395 NPHP3Q7Z494 1330 aa11.62□□□□□ -0.55
TRIM43-201ENST00000272395 AHDC1Q5TGY3 1603 aaPredicted RBP11.62□□□□□ -0.55
TRIM43-201ENST00000272395 PLEKHG3A1L390 1219 aa11.62□□□□□ -0.55
TRIM43-201ENST00000272395 PDE3BQ13370 1112 aa11.62□□□□□ -0.55
TRIM43-201ENST00000272395 PSME1Q06323 249 aa11.61□□□□□ -0.55
TRIM43-201ENST00000272395 KRT28Q7Z3Y7 464 aa11.61□□□□□ -0.55
TRIM43-201ENST00000272395 PXDNQ92626 1479 aa11.61□□□□□ -0.55
TRIM43-201ENST00000272395 SOS2Q07890 1332 aaPredicted RBP11.6□□□□□ -0.55
TRIM43-201ENST00000272395 PHLPP1O60346 1717 aa11.6□□□□□ -0.55
TRIM43-201ENST00000272395 PER1O15534 1290 aaPredicted RBP11.6□□□□□ -0.55
TRIM43-201ENST00000272395 KIF1AQ12756 1690 aa11.6□□□□□ -0.55
TRIM43-201ENST00000272395 NHSL1Q5SYE7 1610 aa11.6□□□□□ -0.55
TRIM43-201ENST00000272395 POLR3AO14802 1390 aaPredicted RBP11.6□□□□□ -0.55
TRIM43-201ENST00000272395 CDCA8Q53HL2 280 aa11.59□□□□□ -0.55
TRIM43-201ENST00000272395 PUS7Q96PZ0 661 aaKnown RBP11.59□□□□□ -0.55
TRIM43-201ENST00000272395 COL16A1Q07092 1604 aaPredicted RBP11.59□□□□□ -0.55
TRIM43-201ENST00000272395 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
TRIM43-201ENST00000272395 B4GALNT3Q6L9W6 998 aa11.59□□□□□ -0.55
TRIM43-201ENST00000272395 CD163L1Q9NR16 1453 aa11.58□□□□□ -0.56
TRIM43-201ENST00000272395 ITSN1Q15811 1721 aa11.58□□□□□ -0.56
TRIM43-201ENST00000272395 PAK3O75914 559 aaPredicted RBP11.58□□□□□ -0.56
TRIM43-201ENST00000272395 LMOD2Q6P5Q4 547 aa11.57□□□□□ -0.56
TRIM43-201ENST00000272395 A0A1W2PP64 1363 aa11.57□□□□□ -0.56
TRIM43-201ENST00000272395 USP6P35125 1406 aa11.56□□□□□ -0.56
TRIM43-201ENST00000272395 BLMP54132 1417 aaPredicted RBP11.56□□□□□ -0.56
TRIM43-201ENST00000272395 CPSF1Q10570 1443 aaKnown RBP11.56□□□□□ -0.56
TRIM43-201ENST00000272395 LRRC59Q96AG4 307 aaKnown RBP11.56□□□□□ -0.56
TRIM43-201ENST00000272395 SPATA31A3Q5VYP0 1347 aa11.56□□□□□ -0.56
TRIM43-201ENST00000272395 CNGB1Q14028 1251 aaPredicted RBP11.55□□□□□ -0.56
TRIM43-201ENST00000272395 NUTM2GQ5VZR2 741 aa11.55□□□□□ -0.56
TRIM43-201ENST00000272395 HDGFL2Q7Z4V5 671 aaPredicted RBP11.55□□□□□ -0.56
TRIM43-201ENST00000272395 CCDC136Q96JN2 1154 aa11.55□□□□□ -0.56
TRIM43-201ENST00000272395 TNS3Q68CZ2 1445 aa11.55□□□□□ -0.56
TRIM43-201ENST00000272395 SBNO1A3KN83 1393 aa11.55□□□□□ -0.56
TRIM43-201ENST00000272395 PNPLA6Q8IY17 1366 aa11.55□□□□□ -0.56
TRIM43-201ENST00000272395 NINLQ9Y2I6 1382 aa11.55□□□□□ -0.56
TRIM43-201ENST00000272395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRIM43-201ENST00000272395 TERF2IPQ9NYB0 399 aa11.55□□□□□ -0.56
TRIM43-201ENST00000272395 ANKRD36BQ8N2N9 1353 aa11.54□□□□□ -0.56
TRIM43-201ENST00000272395 JCADQ9P266 1359 aa11.54□□□□□ -0.56
TRIM43-201ENST00000272395 MYOM1P52179 1685 aa11.54□□□□□ -0.56
TRIM43-201ENST00000272395 NUTM2BA6NNL0 878 aaPredicted RBP11.53□□□□□ -0.56
TRIM43-201ENST00000272395 NUTM2EB1AL46 878 aaPredicted RBP11.53□□□□□ -0.56
TRIM43-201ENST00000272395 NUTM2AQ8IVF1 878 aaPredicted RBP11.53□□□□□ -0.56
TRIM43-201ENST00000272395 CABLES1Q8TDN4 633 aa11.53□□□□□ -0.56
TRIM43-201ENST00000272395 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
TRIM43-201ENST00000272395 CARD14Q9BXL6 1004 aa11.53□□□□□ -0.56
TRIM43-201ENST00000272395 SSH2Q76I76 1423 aa11.53□□□□□ -0.56
TRIM43-201ENST00000272395 TTC21BQ7Z4L5 1316 aa11.53□□□□□ -0.56
TRIM43-201ENST00000272395 TRPM3Q9HCF6 1732 aaPredicted RBP11.53□□□□□ -0.56
TRIM43-201ENST00000272395 PANK3Q9H999 370 aa11.52□□□□□ -0.56
TRIM43-201ENST00000272395 ZRANB1Q9UGI0 708 aa11.52□□□□□ -0.56
TRIM43-201ENST00000272395 NPC1L1Q9UHC9 1359 aa11.52□□□□□ -0.57
TRIM43-201ENST00000272395 RRP1P56182 461 aaKnown RBP11.52□□□□□ -0.57
TRIM43-201ENST00000272395 NME9Q86XW9 330 aa11.52□□□□□ -0.57
TRIM43-201ENST00000272395 ABTB2Q8N961 1025 aa11.52□□□□□ -0.57
TRIM43-201ENST00000272395 RCAN3Q9UKA8 241 aa11.52□□□□□ -0.57
TRIM43-201ENST00000272395 EDC4Q6P2E9 1401 aaKnown RBP11.51□□□□□ -0.57
TRIM43-201ENST00000272395 ARHGEF10O15013 1369 aa11.51□□□□□ -0.57
TRIM43-201ENST00000272395 AKAP12Q02952 1782 aa11.5□□□□□ -0.57
TRIM43-201ENST00000272395 NSD3Q9BZ95 1437 aa11.5□□□□□ -0.57
TRIM43-201ENST00000272395 ERICH6Q7L0X2 663 aa11.5□□□□□ -0.57
TRIM43-201ENST00000272395 NRKQ7Z2Y5 1582 aa11.5□□□□□ -0.57
TRIM43-201ENST00000272395 LRP6O75581 1613 aa11.5□□□□□ -0.57
TRIM43-201ENST00000272395 ALS2Q96Q42 1657 aa11.49□□□□□ -0.57
TRIM43-201ENST00000272395 MON2Q7Z3U7 1717 aa11.49□□□□□ -0.57
TRIM43-201ENST00000272395 ADAMTS2O95450 1211 aa11.49□□□□□ -0.57
TRIM43-201ENST00000272395 NLRP6P59044 892 aa11.49□□□□□ -0.57
TRIM43-201ENST00000272395 TTC21AQ8NDW8 1320 aa11.49□□□□□ -0.57
TRIM43-201ENST00000272395 SHPRHQ149N8 1683 aa11.48□□□□□ -0.57
TRIM43-201ENST00000272395 SOX12O15370 315 aa11.48□□□□□ -0.57
TRIM43-201ENST00000272395 HAP1P54257 671 aaPredicted RBP11.48□□□□□ -0.57
TRIM43-201ENST00000272395 CC2D1BQ5T0F9 858 aaKnown RBP11.48□□□□□ -0.57
TRIM43-201ENST00000272395 PIK3C2AO00443 1686 aa11.48□□□□□ -0.57
TRIM43-201ENST00000272395 SPATA31A6Q5VVP1 1343 aa11.48□□□□□ -0.57
TRIM43-201ENST00000272395 MED1Q15648 1581 aaPredicted RBP11.47□□□□□ -0.57
TRIM43-201ENST00000272395 KNSTRNQ9Y448 316 aa11.47□□□□□ -0.57
TRIM43-201ENST00000272395 COL22A1Q8NFW1 1626 aaPredicted RBP11.47□□□□□ -0.57
TRIM43-201ENST00000272395 FYB1O15117 783 aa11.46□□□□□ -0.57
TRIM43-201ENST00000272395 GGNBP2Q9H3C7 697 aa11.46□□□□□ -0.57
TRIM43-201ENST00000272395 PLSCR2Q9NRY7 297 aa11.46□□□□□ -0.57
TRIM43-201ENST00000272395 USP19O94966 1318 aa11.46□□□□□ -0.57
TRIM43-201ENST00000272395 MEX3CQ5U5Q3 659 aaKnown RBP11.46□□□□□ -0.58
TRIM43-201ENST00000272395 USP31Q70CQ4 1352 aa11.44□□□□□ -0.58
TRIM43-201ENST00000272395 CGNL1Q0VF96 1302 aa11.44□□□□□ -0.58
TRIM43-201ENST00000272395 ZBTB7CA1YPR0 619 aa11.44□□□□□ -0.58
TRIM43-201ENST00000272395 GCP02774 474 aa11.44□□□□□ -0.58
TRIM43-201ENST00000272395 ZC3H6P61129 1189 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms