RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 ANO2Q9NQ90 1003 aa16.81■□□□□ 0.28
NPC1-201ENST00000269228 SLC4A3P48751 1232 aa16.81■□□□□ 0.28
NPC1-201ENST00000269228 PTPRKQ15262 1439 aa16.81■□□□□ 0.28
NPC1-201ENST00000269228 RPRD2Q5VT52 1461 aaKnown RBP16.81■□□□□ 0.28
NPC1-201ENST00000269228 ZKSCAN1P17029 563 aaPredicted RBP16.81■□□□□ 0.28
NPC1-201ENST00000269228 NOB1Q9ULX3 412 aaKnown RBP16.81■□□□□ 0.28
NPC1-201ENST00000269228 TEX14Q8IWB6 1497 aa16.8■□□□□ 0.28
NPC1-201ENST00000269228 TNRQ92752 1358 aa16.8■□□□□ 0.28
NPC1-201ENST00000269228 AAMPQ13685 434 aa16.8■□□□□ 0.28
NPC1-201ENST00000269228 KIF6Q6ZMV9 814 aa16.8■□□□□ 0.28
NPC1-201ENST00000269228 WDR63Q8IWG1 891 aa16.8■□□□□ 0.28
NPC1-201ENST00000269228 SURF6O75683 361 aaKnown RBP16.8■□□□□ 0.28
NPC1-201ENST00000269228 L1TD1Q5T7N2 865 aaKnown RBP16.8■□□□□ 0.28
NPC1-201ENST00000269228 RASSF8Q8NHQ8 419 aa16.8■□□□□ 0.28
NPC1-201ENST00000269228 TRAPPC8Q9Y2L5 1435 aa16.79■□□□□ 0.28
NPC1-201ENST00000269228 ERC2O15083 957 aa16.79■□□□□ 0.28
NPC1-201ENST00000269228 ZNF428Q96B54 188 aa16.79■□□□□ 0.28
NPC1-201ENST00000269228 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.79■□□□□ 0.28
NPC1-201ENST00000269228 A2MP01023 1474 aa16.79■□□□□ 0.28
NPC1-201ENST00000269228 SYAP1Q96A49 352 aaPredicted RBP16.79■□□□□ 0.28
NPC1-201ENST00000269228 C1orf115Q9H7X2 142 aa16.79■□□□□ 0.28
NPC1-201ENST00000269228 AMOTL1Q8IY63 956 aa16.78■□□□□ 0.28
NPC1-201ENST00000269228 FAM184AQ8NB25 1140 aa16.78■□□□□ 0.28
NPC1-201ENST00000269228 ZNF518AQ6AHZ1 1483 aa16.77■□□□□ 0.28
NPC1-201ENST00000269228 H3BQV1 296 aa16.77■□□□□ 0.28
NPC1-201ENST00000269228 IFFO2Q5TF58 517 aa16.77■□□□□ 0.28
NPC1-201ENST00000269228 SYNE3Q6ZMZ3 975 aa16.77■□□□□ 0.27
NPC1-201ENST00000269228 MYL6BP14649 208 aa16.76■□□□□ 0.27
NPC1-201ENST00000269228 NFE2L2Q16236 605 aa16.76■□□□□ 0.27
NPC1-201ENST00000269228 EMILIN1Q9Y6C2 1016 aa16.76■□□□□ 0.27
NPC1-201ENST00000269228 WDR62O43379 1518 aa16.76■□□□□ 0.27
NPC1-201ENST00000269228 RAD21O60216 631 aa16.76■□□□□ 0.27
NPC1-201ENST00000269228 TMPOP42166 694 aaKnown RBP16.76■□□□□ 0.27
NPC1-201ENST00000269228 SF3A1Q15459 793 aaKnown RBP16.76■□□□□ 0.27
NPC1-201ENST00000269228 SCAF11Q99590 1463 aaKnown RBP16.76■□□□□ 0.27
NPC1-201ENST00000269228 CLASRPQ8N2M8 674 aaKnown RBP16.76■□□□□ 0.27
NPC1-201ENST00000269228 AKAP17AQ02040 695 aaKnown RBP16.75■□□□□ 0.27
NPC1-201ENST00000269228 CCDC34Q96HJ3 373 aa16.75■□□□□ 0.27
NPC1-201ENST00000269228 BTBD11A6QL63 1104 aa16.75■□□□□ 0.27
NPC1-201ENST00000269228 FOXD4L6Q3SYB3 417 aaPredicted RBP16.75■□□□□ 0.27
NPC1-201ENST00000269228 FOXD4L3Q6VB84 417 aaPredicted RBP16.75■□□□□ 0.27
NPC1-201ENST00000269228 ITSN2Q9NZM3 1697 aa16.75■□□□□ 0.27
NPC1-201ENST00000269228 DUOX2Q9NRD8 1548 aa16.75■□□□□ 0.27
NPC1-201ENST00000269228 CSPP1Q1MSJ5 1256 aa16.75■□□□□ 0.27
NPC1-201ENST00000269228 INTS3Q68E01 1043 aaKnown RBP16.75■□□□□ 0.27
NPC1-201ENST00000269228 THUMPD2Q9BTF0 503 aaKnown RBP16.75■□□□□ 0.27
NPC1-201ENST00000269228 TRIM34Q9BYJ4 488 aa16.75■□□□□ 0.27
NPC1-201ENST00000269228 USHBP1Q8N6Y0 703 aa16.74■□□□□ 0.27
NPC1-201ENST00000269228 MARCH6O60337 910 aa16.74■□□□□ 0.27
NPC1-201ENST00000269228 PDE3AQ14432 1141 aa16.74■□□□□ 0.27
NPC1-201ENST00000269228 VPS53Q5VIR6 699 aa16.74■□□□□ 0.27
NPC1-201ENST00000269228 WASHC4Q2M389 1173 aa16.74■□□□□ 0.27
NPC1-201ENST00000269228 RNF20Q5VTR2 975 aa16.74■□□□□ 0.27
NPC1-201ENST00000269228 GNAI2P04899 355 aa16.73■□□□□ 0.27
NPC1-201ENST00000269228 GNAT3A8MTJ3 354 aa16.73■□□□□ 0.27
NPC1-201ENST00000269228 TRDNQ13061 729 aa16.73■□□□□ 0.27
NPC1-201ENST00000269228 WWC1Q8IX03 1113 aa16.73■□□□□ 0.27
NPC1-201ENST00000269228 MIS18AQ9NYP9 233 aa16.73■□□□□ 0.27
NPC1-201ENST00000269228 CPLX2Q6PUV4 134 aaKnown RBP16.73■□□□□ 0.27
NPC1-201ENST00000269228 MCM10Q7L590 875 aa16.73■□□□□ 0.27
NPC1-201ENST00000269228 NAP1L5Q96NT1 182 aaPredicted RBP16.73■□□□□ 0.27
NPC1-201ENST00000269228 SRCIN1Q9C0H9 1055 aa16.72■□□□□ 0.27
NPC1-201ENST00000269228 AMER1Q5JTC6 1135 aaPredicted RBP16.72■□□□□ 0.27
NPC1-201ENST00000269228 CHMP4CQ96CF2 233 aa16.72■□□□□ 0.27
NPC1-201ENST00000269228 NUP160Q12769 1436 aa16.72■□□□□ 0.27
NPC1-201ENST00000269228 ADAMTS2O95450 1211 aa16.72■□□□□ 0.27
NPC1-201ENST00000269228 DCTN1Q14203 1278 aa16.71■□□□□ 0.27
NPC1-201ENST00000269228 ATF7IPQ6VMQ6 1270 aa16.71■□□□□ 0.27
NPC1-201ENST00000269228 CT47B1P0C2W7 299 aaPredicted RBP16.71■□□□□ 0.27
NPC1-201ENST00000269228 MCTP1Q6DN14 999 aa16.71■□□□□ 0.27
NPC1-201ENST00000269228 UHRF1BP1LA0JNW5 1464 aa16.71■□□□□ 0.26
NPC1-201ENST00000269228 CCT4P50991 539 aaKnown RBP16.7■□□□□ 0.26
NPC1-201ENST00000269228 CCDC27Q2M243 656 aa16.7■□□□□ 0.26
NPC1-201ENST00000269228 CPLX1O14810 134 aa16.7■□□□□ 0.26
NPC1-201ENST00000269228 MSNP26038 577 aaKnown RBP16.7■□□□□ 0.26
NPC1-201ENST00000269228 KRT28Q7Z3Y7 464 aa16.7■□□□□ 0.26
NPC1-201ENST00000269228 FSD1Q9BTV5 496 aa16.69■□□□□ 0.26
NPC1-201ENST00000269228 ABCC2Q92887 1545 aa16.69■□□□□ 0.26
NPC1-201ENST00000269228 DISP3Q9P2K9 1392 aa16.69■□□□□ 0.26
NPC1-201ENST00000269228 PDZRN3Q9UPQ7 1066 aa16.69■□□□□ 0.26
NPC1-201ENST00000269228 FYB1O15117 783 aa16.68■□□□□ 0.26
NPC1-201ENST00000269228 CDC45O75419 566 aa16.68■□□□□ 0.26
NPC1-201ENST00000269228 ABCC10Q5T3U5 1492 aa16.68■□□□□ 0.26
NPC1-201ENST00000269228 ACEP12821 1306 aa16.68■□□□□ 0.26
NPC1-201ENST00000269228 DNAJC2Q99543 621 aaKnown RBP16.68■□□□□ 0.26
NPC1-201ENST00000269228 CNNM1Q9NRU3 951 aa16.68■□□□□ 0.26
NPC1-201ENST00000269228 DHX16O60231 1041 aaKnown RBP16.67■□□□□ 0.26
NPC1-201ENST00000269228 SF3B2Q13435 895 aaKnown RBP16.67■□□□□ 0.26
NPC1-201ENST00000269228 DMRT2Q9Y5R5 561 aa16.67■□□□□ 0.26
NPC1-201ENST00000269228 PTCD1O75127 700 aaKnown RBP16.67■□□□□ 0.26
NPC1-201ENST00000269228 SIL1Q9H173 461 aa16.67■□□□□ 0.26
NPC1-201ENST00000269228 NFXL1Q6ZNB6 911 aa16.67■□□□□ 0.26
NPC1-201ENST00000269228 DISP1Q96F81 1524 aa16.67■□□□□ 0.26
NPC1-201ENST00000269228 SLFN5Q08AF3 891 aa16.67■□□□□ 0.26
NPC1-201ENST00000269228 CNTROBQ8N137 903 aa16.67■□□□□ 0.26
NPC1-201ENST00000269228 ATP6V1DQ9Y5K8 247 aa16.67■□□□□ 0.26
NPC1-201ENST00000269228 C22orf23Q9BZE7 217 aa16.66■□□□□ 0.26
NPC1-201ENST00000269228 TPM4P67936 248 aa16.66■□□□□ 0.26
NPC1-201ENST00000269228 CADPS2Q86UW7 1296 aa16.66■□□□□ 0.26
NPC1-201ENST00000269228 CREBRFQ8IUR6 639 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms