RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 USP6P35125 1406 aa21.6■■□□□ 1.05
PCTP-201ENST00000268896 TMEM94Q12767 1356 aa21.59■■□□□ 1.05
PCTP-201ENST00000268896 ESCO1Q5FWF5 840 aa21.58■■□□□ 1.05
PCTP-201ENST00000268896 SALL2Q9Y467 1007 aaPredicted RBP21.58■■□□□ 1.05
PCTP-201ENST00000268896 NRKQ7Z2Y5 1582 aa21.57■■□□□ 1.04
PCTP-201ENST00000268896 COG3Q96JB2 828 aa21.56■■□□□ 1.04
PCTP-201ENST00000268896 PHF8Q9UPP1 1060 aa21.56■■□□□ 1.04
PCTP-201ENST00000268896 ZNF335Q9H4Z2 1342 aaPredicted RBP21.56■■□□□ 1.04
PCTP-201ENST00000268896 POLR3AO14802 1390 aaPredicted RBP21.56■■□□□ 1.04
PCTP-201ENST00000268896 PPM1GO15355 546 aaPredicted RBP21.55■■□□□ 1.04
PCTP-201ENST00000268896 C19orf44Q9H6X5 657 aa21.55■■□□□ 1.04
PCTP-201ENST00000268896 ZBED9Q6R2W3 1325 aa21.54■■□□□ 1.04
PCTP-201ENST00000268896 CFAP53Q96M91 514 aa21.54■■□□□ 1.04
PCTP-201ENST00000268896 ORAI2Q96SN7 254 aa21.54■■□□□ 1.04
PCTP-201ENST00000268896 PAK3O75914 559 aaPredicted RBP21.53■■□□□ 1.04
PCTP-201ENST00000268896 CCDC146Q8IYE0 955 aa21.53■■□□□ 1.04
PCTP-201ENST00000268896 SOX12O15370 315 aa21.52■■□□□ 1.04
PCTP-201ENST00000268896 BLMP54132 1417 aaPredicted RBP21.51■■□□□ 1.03
PCTP-201ENST00000268896 SSH2Q76I76 1423 aa21.51■■□□□ 1.03
PCTP-201ENST00000268896 ATF3P18847 181 aa21.51■■□□□ 1.03
PCTP-201ENST00000268896 NUTM2GQ5VZR2 741 aa21.5■■□□□ 1.03
PCTP-201ENST00000268896 RRS1Q15050 365 aaKnown RBP21.5■■□□□ 1.03
PCTP-201ENST00000268896 EMILIN1Q9Y6C2 1016 aa21.5■■□□□ 1.03
PCTP-201ENST00000268896 SHPRHQ149N8 1683 aa21.5■■□□□ 1.03
PCTP-201ENST00000268896 POLKQ9UBT6 870 aa21.49■■□□□ 1.03
PCTP-201ENST00000268896 MAP2P11137 1827 aaKnown RBP21.48■■□□□ 1.03
PCTP-201ENST00000268896 XPCQ01831 940 aaPredicted RBP21.48■■□□□ 1.03
PCTP-201ENST00000268896 TTC21AQ8NDW8 1320 aa21.48■■□□□ 1.03
PCTP-201ENST00000268896 PSME1Q06323 249 aa21.48■■□□□ 1.03
PCTP-201ENST00000268896 FOXO3O43524 673 aa21.47■■□□□ 1.03
PCTP-201ENST00000268896 C1orf167Q5SNV9 1468 aa21.47■■□□□ 1.03
PCTP-201ENST00000268896 OVOS2A0A0J9YW53 1432 aa21.46■■□□□ 1.03
PCTP-201ENST00000268896 OVOS2Q6IE36 1432 aa21.46■■□□□ 1.03
PCTP-201ENST00000268896 XIRP1Q702N8 1843 aaKnown RBP21.45■■□□□ 1.02
PCTP-201ENST00000268896 PIK3C2AO00443 1686 aa21.45■■□□□ 1.02
PCTP-201ENST00000268896 U2SURPO15042 1029 aaKnown RBP21.45■■□□□ 1.02
PCTP-201ENST00000268896 MSH6P52701 1360 aa21.45■■□□□ 1.02
PCTP-201ENST00000268896 LRRC7Q96NW7 1537 aa21.45■■□□□ 1.02
PCTP-201ENST00000268896 NLRP6P59044 892 aa21.45■■□□□ 1.02
PCTP-201ENST00000268896 ABTB2Q8N961 1025 aa21.45■■□□□ 1.02
PCTP-201ENST00000268896 U2AF1L5P0DN76 240 aaPredicted RBP21.44■■□□□ 1.02
PCTP-201ENST00000268896 U2AF1Q01081 240 aaKnown RBP eCLIP21.44■■□□□ 1.02
PCTP-201ENST00000268896 MST1RQ04912 1400 aa21.43■■□□□ 1.02
PCTP-201ENST00000268896 NCOA3Q9Y6Q9 1424 aa21.43■■□□□ 1.02
PCTP-201ENST00000268896 COL3A1P02461 1466 aaPredicted RBP21.43■■□□□ 1.02
PCTP-201ENST00000268896 INSRP06213 1382 aa21.43■■□□□ 1.02
PCTP-201ENST00000268896 PLEKHG5O94827 1062 aa21.43■■□□□ 1.02
PCTP-201ENST00000268896 DMRT2Q9Y5R5 561 aa21.43■■□□□ 1.02
PCTP-201ENST00000268896 CADPS2Q86UW7 1296 aa21.42■■□□□ 1.02
PCTP-201ENST00000268896 AATKQ6ZMQ8 1374 aa21.42■■□□□ 1.02
PCTP-201ENST00000268896 DIAPH1O60610 1272 aaKnown RBP21.41■■□□□ 1.02
PCTP-201ENST00000268896 DDX17Q92841 729 aaKnown RBP21.41■■□□□ 1.02
PCTP-201ENST00000268896 DCCP43146 1447 aa21.4■■□□□ 1.02
PCTP-201ENST00000268896 APAF1O14727 1248 aa21.4■■□□□ 1.02
PCTP-201ENST00000268896 NUDCQ9Y266 331 aa21.4■■□□□ 1.02
PCTP-201ENST00000268896 LMOD2Q6P5Q4 547 aa21.39■■□□□ 1.02
PCTP-201ENST00000268896 PNPLA6Q8IY17 1366 aa21.39■■□□□ 1.01
PCTP-201ENST00000268896 USP31Q70CQ4 1352 aa21.38■■□□□ 1.01
PCTP-201ENST00000268896 KRT28Q7Z3Y7 464 aa21.37■■□□□ 1.01
PCTP-201ENST00000268896 SMG6Q86US8 1419 aaKnown RBP21.36■■□□□ 1.01
PCTP-201ENST00000268896 KIF1AQ12756 1690 aa21.36■■□□□ 1.01
PCTP-201ENST00000268896 CDK12Q9NYV4 1490 aaPredicted RBP21.36■■□□□ 1.01
PCTP-201ENST00000268896 NEUROD2Q15784 382 aa21.35■■□□□ 1.01
PCTP-201ENST00000268896 MARF1Q9Y4F3 1742 aaKnown RBP21.35■■□□□ 1.01
PCTP-201ENST00000268896 RUNDC1Q96C34 613 aa21.34■■□□□ 1.01
PCTP-201ENST00000268896 RRP7AQ9Y3A4 280 aaKnown RBP21.34■■□□□ 1.01
PCTP-201ENST00000268896 MAP3K19Q56UN5 1328 aa21.34■■□□□ 1.01
PCTP-201ENST00000268896 CDCA7LQ96GN5 454 aa21.34■■□□□ 1.01
PCTP-201ENST00000268896 PEAK1Q9H792 1746 aa21.33■■□□□ 1
PCTP-201ENST00000268896 IL13P35225 146 aa21.32■■□□□ 1
PCTP-201ENST00000268896 HSP90AB2PQ58FF8 381 aa21.32■■□□□ 1
PCTP-201ENST00000268896 HMOX1P09601 288 aa21.31■■□□□ 1
PCTP-201ENST00000268896 ZBTB7CA1YPR0 619 aa21.31■■□□□ 1
PCTP-201ENST00000268896 AMPHP49418 695 aa21.31■■□□□ 1
PCTP-201ENST00000268896 TCP11L2Q8N4U5 519 aa21.31■■□□□ 1
PCTP-201ENST00000268896 TRPM3Q9HCF6 1732 aaPredicted RBP21.3■■□□□ 1
PCTP-201ENST00000268896 SUPT16HQ9Y5B9 1047 aaKnown RBP21.29■■□□□ 1
PCTP-201ENST00000268896 EIF4A2Q14240 407 aaKnown RBP21.29■■□□□ 1
PCTP-201ENST00000268896 BRINP3Q76B58 766 aa21.29■■□□□ 1
PCTP-201ENST00000268896 SLAIN2Q9P270 581 aa21.29■■□□□ 1
PCTP-201ENST00000268896 USP54Q70EL1 1684 aa21.28■■□□□ 1
PCTP-201ENST00000268896 PLEKHF1Q96S99 279 aa21.27■■□□□ 1
PCTP-201ENST00000268896 NPHP3Q7Z494 1330 aa21.27■□□□□ 0.99
PCTP-201ENST00000268896 MAPK8IP3Q9UPT6 1336 aa21.27■□□□□ 0.99
PCTP-201ENST00000268896 IQSEC2Q5JU85 1478 aa21.26■□□□□ 0.99
PCTP-201ENST00000268896 SBNO1A3KN83 1393 aa21.26■□□□□ 0.99
PCTP-201ENST00000268896 PRKAR2BP31323 418 aa21.26■□□□□ 0.99
PCTP-201ENST00000268896 PDE3BQ13370 1112 aa21.26■□□□□ 0.99
PCTP-201ENST00000268896 FLT4P35916 1363 aa21.25■□□□□ 0.99
PCTP-201ENST00000268896 RSPH6AQ9H0K4 717 aa21.24■□□□□ 0.99
PCTP-201ENST00000268896 ZNF521Q96K83 1311 aa21.24■□□□□ 0.99
PCTP-201ENST00000268896 FCHSD2O94868 740 aa21.23■□□□□ 0.99
PCTP-201ENST00000268896 LTV1Q96GA3 475 aaPredicted RBP21.23■□□□□ 0.99
PCTP-201ENST00000268896 HOXC9P31274 260 aa21.22■□□□□ 0.99
PCTP-201ENST00000268896 GOLGA2Q08379 1002 aa21.22■□□□□ 0.99
PCTP-201ENST00000268896 LTN1O94822 1766 aa21.22■□□□□ 0.99
PCTP-201ENST00000268896 GCP02774 474 aa21.22■□□□□ 0.99
PCTP-201ENST00000268896 AEBP1Q8IUX7 1158 aa21.22■□□□□ 0.99
PCTP-201ENST00000268896 NFAT5O94916 1531 aa21.21■□□□□ 0.99
PCTP-201ENST00000268896 ALS2Q96Q42 1657 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms