RNA–Protein interactions for RNA: ENST00000268082.4

CCDC33-201, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best) BASIC

Gene CCDC33, Length 2,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-201ENST00000268082 CT47B1P0C2W7 299 aaPredicted RBP16.31■□□□□ 0.2
CCDC33-201ENST00000268082 CANXP27824 592 aaKnown RBP16.31■□□□□ 0.2
CCDC33-201ENST00000268082 SRPK2P78362 688 aaKnown RBP16.31■□□□□ 0.2
CCDC33-201ENST00000268082 RRP7AQ9Y3A4 280 aaKnown RBP16.31■□□□□ 0.2
CCDC33-201ENST00000268082 A2ML1A8K2U0 1454 aa16.31■□□□□ 0.2
CCDC33-201ENST00000268082 ZNF142P52746 1687 aaPredicted RBP16.31■□□□□ 0.2
CCDC33-201ENST00000268082 RTL5Q5HYW3 569 aaPredicted RBP16.3■□□□□ 0.2
CCDC33-201ENST00000268082 U2AF1L5P0DN76 240 aaPredicted RBP16.3■□□□□ 0.2
CCDC33-201ENST00000268082 U2AF1Q01081 240 aaKnown RBP eCLIP16.3■□□□□ 0.2
CCDC33-201ENST00000268082 NEUROD2Q15784 382 aa16.3■□□□□ 0.2
CCDC33-201ENST00000268082 PRAM1Q96QH2 718 aa16.3■□□□□ 0.2
CCDC33-201ENST00000268082 NCKAP5LQ9HCH0 1330 aa16.3■□□□□ 0.2
CCDC33-201ENST00000268082 STK26Q9P289 416 aa16.3■□□□□ 0.2
CCDC33-201ENST00000268082 MAPK8IP3Q9UPT6 1336 aa16.3■□□□□ 0.2
CCDC33-201ENST00000268082 DEKP35659 375 aaKnown RBP16.29■□□□□ 0.2
CCDC33-201ENST00000268082 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
CCDC33-201ENST00000268082 MON2Q7Z3U7 1717 aa16.29■□□□□ 0.2
CCDC33-201ENST00000268082 PNPLA6Q8IY17 1366 aa16.28■□□□□ 0.2
CCDC33-201ENST00000268082 PPM1GO15355 546 aaPredicted RBP16.28■□□□□ 0.2
CCDC33-201ENST00000268082 SAFB2Q14151 953 aaKnown RBP eCLIP16.28■□□□□ 0.2
CCDC33-201ENST00000268082 USP35Q9P2H5 1018 aa16.28■□□□□ 0.2
CCDC33-201ENST00000268082 AKAP12Q02952 1782 aa16.28■□□□□ 0.2
CCDC33-201ENST00000268082 IGHDP01880 384 aa16.28■□□□□ 0.2
CCDC33-201ENST00000268082 PMFBP1Q8TBY8 1022 aa16.28■□□□□ 0.2
CCDC33-201ENST00000268082 PANK1Q8TE04 598 aa16.28■□□□□ 0.2
CCDC33-201ENST00000268082 PLEKHF1Q96S99 279 aa16.28■□□□□ 0.2
CCDC33-201ENST00000268082 POGKQ9P215 609 aa16.28■□□□□ 0.2
CCDC33-201ENST00000268082 COG6Q9Y2V7 657 aa16.28■□□□□ 0.2
CCDC33-201ENST00000268082 MINK1Q8N4C8 1332 aaPredicted RBP16.27■□□□□ 0.2
CCDC33-201ENST00000268082 ITSN1Q15811 1721 aa16.27■□□□□ 0.19
CCDC33-201ENST00000268082 IL16Q14005 1332 aa16.27■□□□□ 0.19
CCDC33-201ENST00000268082 FYB1O15117 783 aa16.26■□□□□ 0.19
CCDC33-201ENST00000268082 HDGFL2Q7Z4V5 671 aaPredicted RBP16.26■□□□□ 0.19
CCDC33-201ENST00000268082 LRRC7Q96NW7 1537 aa16.26■□□□□ 0.19
CCDC33-201ENST00000268082 RIMS2Q9UQ26 1411 aa16.26■□□□□ 0.19
CCDC33-201ENST00000268082 RGS3P49796 1198 aa16.25■□□□□ 0.19
CCDC33-201ENST00000268082 GGNBP2Q9H3C7 697 aa16.25■□□□□ 0.19
CCDC33-201ENST00000268082 FRAT1Q92837 279 aaPredicted RBP16.25■□□□□ 0.19
CCDC33-201ENST00000268082 PNNQ9H307 717 aaKnown RBP16.24■□□□□ 0.19
CCDC33-201ENST00000268082 UBR1Q8IWV7 1749 aa16.24■□□□□ 0.19
CCDC33-201ENST00000268082 TMPOP42166 694 aaKnown RBP16.23■□□□□ 0.19
CCDC33-201ENST00000268082 CDK19Q9BWU1 502 aa16.23■□□□□ 0.19
CCDC33-201ENST00000268082 BCL11AQ9H165 835 aa16.23■□□□□ 0.19
CCDC33-201ENST00000268082 CPS1P31327 1500 aa16.22■□□□□ 0.19
CCDC33-201ENST00000268082 DLG5Q8TDM6 1919 aa16.22■□□□□ 0.19
CCDC33-201ENST00000268082 RLBP1P12271 317 aa16.22■□□□□ 0.19
CCDC33-201ENST00000268082 STAG3Q9UJ98 1225 aa16.22■□□□□ 0.19
CCDC33-201ENST00000268082 TRIM35Q9UPQ4 493 aa16.21■□□□□ 0.19
CCDC33-201ENST00000268082 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.19
CCDC33-201ENST00000268082 U2SURPO15042 1029 aaKnown RBP16.2■□□□□ 0.18
CCDC33-201ENST00000268082 DIAPH1O60610 1272 aaKnown RBP16.2■□□□□ 0.18
CCDC33-201ENST00000268082 ZKSCAN2Q63HK3 967 aa16.2■□□□□ 0.18
CCDC33-201ENST00000268082 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
CCDC33-201ENST00000268082 CPSF1Q10570 1443 aaKnown RBP16.19■□□□□ 0.18
CCDC33-201ENST00000268082 EDC4Q6P2E9 1401 aaKnown RBP16.19■□□□□ 0.18
CCDC33-201ENST00000268082 TECPR2O15040 1411 aa16.19■□□□□ 0.18
CCDC33-201ENST00000268082 LAS1LQ9Y4W2 734 aaKnown RBP16.18■□□□□ 0.18
CCDC33-201ENST00000268082 PCDHB15Q9Y5E8 787 aa16.18■□□□□ 0.18
CCDC33-201ENST00000268082 CDK12Q9NYV4 1490 aaPredicted RBP16.18■□□□□ 0.18
CCDC33-201ENST00000268082 PPIP5K1Q6PFW1 1433 aa16.18■□□□□ 0.18
CCDC33-201ENST00000268082 CABP1Q9NZU7 370 aa16.18■□□□□ 0.18
CCDC33-201ENST00000268082 TNNQ9UQP3 1299 aa16.18■□□□□ 0.18
CCDC33-201ENST00000268082 NEFMP07197 916 aa16.17■□□□□ 0.18
CCDC33-201ENST00000268082 THEMISQ8N1K5 641 aaPredicted RBP16.17■□□□□ 0.18
CCDC33-201ENST00000268082 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
CCDC33-201ENST00000268082 RWDD1Q9H446 243 aaPredicted RBP16.17■□□□□ 0.18
CCDC33-201ENST00000268082 DZIP1LQ8IYY4 767 aaKnown RBP16.17■□□□□ 0.18
CCDC33-201ENST00000268082 DAXXQ9UER7 740 aaPredicted RBP16.17■□□□□ 0.18
CCDC33-201ENST00000268082 TOPAZ1Q8N9V7 1692 aa16.16■□□□□ 0.18
CCDC33-201ENST00000268082 NRKQ7Z2Y5 1582 aa16.16■□□□□ 0.18
CCDC33-201ENST00000268082 FCHSD2O94868 740 aa16.16■□□□□ 0.18
CCDC33-201ENST00000268082 EXOSC9Q06265 439 aaKnown RBP16.16■□□□□ 0.18
CCDC33-201ENST00000268082 LTKP29376 864 aa16.15■□□□□ 0.18
CCDC33-201ENST00000268082 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCDC33-201ENST00000268082 TSR2Q969E8 191 aaKnown RBP16.15■□□□□ 0.18
CCDC33-201ENST00000268082 USP19O94966 1318 aa16.15■□□□□ 0.18
CCDC33-201ENST00000268082 RIPK4P57078 832 aa16.14■□□□□ 0.17
CCDC33-201ENST00000268082 FTSJ3Q8IY81 847 aaKnown RBP16.14■□□□□ 0.17
CCDC33-201ENST00000268082 SIRT1Q96EB6 747 aa16.14■□□□□ 0.17
CCDC33-201ENST00000268082 SMC4Q9NTJ3 1288 aa16.14■□□□□ 0.17
CCDC33-201ENST00000268082 AATKQ6ZMQ8 1374 aa16.14■□□□□ 0.17
CCDC33-201ENST00000268082 ANKLE2Q86XL3 938 aa16.14■□□□□ 0.17
CCDC33-201ENST00000268082 KIF16BQ96L93 1317 aa16.13■□□□□ 0.17
CCDC33-201ENST00000268082 ZNF335Q9H4Z2 1342 aaPredicted RBP16.13■□□□□ 0.17
CCDC33-201ENST00000268082 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
CCDC33-201ENST00000268082 DDX19BQ9UMR2 479 aa16.13■□□□□ 0.17
CCDC33-201ENST00000268082 PDZRN3Q9UPQ7 1066 aa16.13■□□□□ 0.17
CCDC33-201ENST00000268082 ALDH1L2Q3SY69 923 aa16.12■□□□□ 0.17
CCDC33-201ENST00000268082 ATF7IPQ6VMQ6 1270 aa16.12■□□□□ 0.17
CCDC33-201ENST00000268082 TXNDC2Q86VQ3 553 aa16.12■□□□□ 0.17
CCDC33-201ENST00000268082 ZNF428Q96B54 188 aa16.12■□□□□ 0.17
CCDC33-201ENST00000268082 POLKQ9UBT6 870 aa16.12■□□□□ 0.17
CCDC33-201ENST00000268082 NALCNQ8IZF0 1738 aa16.12■□□□□ 0.17
CCDC33-201ENST00000268082 WAPLQ7Z5K2 1190 aa16.12■□□□□ 0.17
CCDC33-201ENST00000268082 SSH1Q8WYL5 1049 aa16.12■□□□□ 0.17
CCDC33-201ENST00000268082 WASLO00401 505 aaPredicted RBP16.11■□□□□ 0.17
CCDC33-201ENST00000268082 TRIM27P14373 513 aa16.11■□□□□ 0.17
CCDC33-201ENST00000268082 HDAC1Q13547 482 aaPredicted RBP16.11■□□□□ 0.17
CCDC33-201ENST00000268082 BRPF1P55201 1214 aaPredicted RBP16.1■□□□□ 0.17
CCDC33-201ENST00000268082 METP08581 1390 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms