RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 AAMPQ13685 434 aa13.27□□□□□ -0.28
LSG1-201ENST00000265245 FYB1O15117 783 aa13.27□□□□□ -0.29
LSG1-201ENST00000265245 MAPK8IP3Q9UPT6 1336 aa13.27□□□□□ -0.29
LSG1-201ENST00000265245 CDK19Q9BWU1 502 aa13.27□□□□□ -0.29
LSG1-201ENST00000265245 MED14O60244 1454 aa13.25□□□□□ -0.29
LSG1-201ENST00000265245 ALKQ9UM73 1620 aa13.25□□□□□ -0.29
LSG1-201ENST00000265245 SPATA31D1Q6ZQQ2 1576 aa13.25□□□□□ -0.29
LSG1-201ENST00000265245 CABP1Q9NZU7 370 aa13.25□□□□□ -0.29
LSG1-201ENST00000265245 MYO5BQ9ULV0 1848 aa13.25□□□□□ -0.29
LSG1-201ENST00000265245 C3P01024 1663 aa13.24□□□□□ -0.29
LSG1-201ENST00000265245 IGHDP01880 384 aa13.24□□□□□ -0.29
LSG1-201ENST00000265245 CT47B1P0C2W7 299 aaPredicted RBP13.24□□□□□ -0.29
LSG1-201ENST00000265245 C8orf34Q49A92 452 aa13.24□□□□□ -0.29
LSG1-201ENST00000265245 BCL2L13Q9BXK5 485 aa13.24□□□□□ -0.29
LSG1-201ENST00000265245 PNNQ9H307 717 aaKnown RBP13.24□□□□□ -0.29
LSG1-201ENST00000265245 PMFBP1Q8TBY8 1022 aa13.23□□□□□ -0.29
LSG1-201ENST00000265245 CD163L1Q9NR16 1453 aa13.23□□□□□ -0.29
LSG1-201ENST00000265245 DIAPH1O60610 1272 aaKnown RBP13.23□□□□□ -0.29
LSG1-201ENST00000265245 MLECQ14165 292 aa13.23□□□□□ -0.29
LSG1-201ENST00000265245 DAXXQ9UER7 740 aaPredicted RBP13.23□□□□□ -0.29
LSG1-201ENST00000265245 TMPOP42166 694 aaKnown RBP13.22□□□□□ -0.29
LSG1-201ENST00000265245 PLEKHF1Q96S99 279 aa13.22□□□□□ -0.29
LSG1-201ENST00000265245 RIMS2Q9UQ26 1411 aa13.22□□□□□ -0.29
LSG1-201ENST00000265245 A2ML1A8K2U0 1454 aa13.22□□□□□ -0.29
LSG1-201ENST00000265245 ADGRB2O60241 1585 aa13.22□□□□□ -0.29
LSG1-201ENST00000265245 ESF1Q9H501 851 aaKnown RBP13.22□□□□□ -0.29
LSG1-201ENST00000265245 NLRP1Q9C000 1473 aa13.21□□□□□ -0.29
LSG1-201ENST00000265245 COL3A1P02461 1466 aaPredicted RBP13.2□□□□□ -0.3
LSG1-201ENST00000265245 PPM1GO15355 546 aaPredicted RBP13.2□□□□□ -0.3
LSG1-201ENST00000265245 RLBP1P12271 317 aa13.2□□□□□ -0.3
LSG1-201ENST00000265245 ZKSCAN2Q63HK3 967 aa13.2□□□□□ -0.3
LSG1-201ENST00000265245 WAPLQ7Z5K2 1190 aa13.2□□□□□ -0.3
LSG1-201ENST00000265245 FTSJ3Q8IY81 847 aaKnown RBP13.2□□□□□ -0.3
LSG1-201ENST00000265245 NEFMP07197 916 aa13.2□□□□□ -0.3
LSG1-201ENST00000265245 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.2□□□□□ -0.3
LSG1-201ENST00000265245 TSR2Q969E8 191 aaKnown RBP13.2□□□□□ -0.3
LSG1-201ENST00000265245 LAS1LQ9Y4W2 734 aaKnown RBP13.2□□□□□ -0.3
LSG1-201ENST00000265245 DLC1Q96QB1 1528 aa13.19□□□□□ -0.3
LSG1-201ENST00000265245 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.19□□□□□ -0.3
LSG1-201ENST00000265245 IL16Q14005 1332 aa13.19□□□□□ -0.3
LSG1-201ENST00000265245 PNPLA6Q8IY17 1366 aa13.19□□□□□ -0.3
LSG1-201ENST00000265245 SMC4Q9NTJ3 1288 aa13.19□□□□□ -0.3
LSG1-201ENST00000265245 RIPK4P57078 832 aa13.19□□□□□ -0.3
LSG1-201ENST00000265245 TRIM35Q9UPQ4 493 aa13.19□□□□□ -0.3
LSG1-201ENST00000265245 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
LSG1-201ENST00000265245 ATP7BP35670 1465 aa13.18□□□□□ -0.3
LSG1-201ENST00000265245 RWDD1Q9H446 243 aaPredicted RBP13.18□□□□□ -0.3
LSG1-201ENST00000265245 FCHSD2O94868 740 aa13.17□□□□□ -0.3
LSG1-201ENST00000265245 MVPQ14764 893 aaKnown RBP13.17□□□□□ -0.3
LSG1-201ENST00000265245 DZIP1LQ8IYY4 767 aaKnown RBP13.17□□□□□ -0.3
LSG1-201ENST00000265245 TNNQ9UQP3 1299 aa13.17□□□□□ -0.3
LSG1-201ENST00000265245 HDGFP51858 240 aaKnown RBP13.17□□□□□ -0.3
LSG1-201ENST00000265245 USP35Q9P2H5 1018 aa13.17□□□□□ -0.3
LSG1-201ENST00000265245 ZNF142P52746 1687 aaPredicted RBP13.17□□□□□ -0.3
LSG1-201ENST00000265245 VSIG10Q8N0Z9 540 aa13.17□□□□□ -0.3
LSG1-201ENST00000265245 PCDHB15Q9Y5E8 787 aa13.17□□□□□ -0.3
LSG1-201ENST00000265245 RIMS1Q86UR5 1692 aaKnown RBP13.16□□□□□ -0.3
LSG1-201ENST00000265245 ANKRD26Q9UPS8 1709 aa13.16□□□□□ -0.3
LSG1-201ENST00000265245 WASLO00401 505 aaPredicted RBP13.15□□□□□ -0.3
LSG1-201ENST00000265245 POLKQ9UBT6 870 aa13.15□□□□□ -0.3
LSG1-201ENST00000265245 SSH1Q8WYL5 1049 aa13.14□□□□□ -0.31
LSG1-201ENST00000265245 ZMYM3Q14202 1370 aa13.14□□□□□ -0.31
LSG1-201ENST00000265245 PRKAR2BP31323 418 aa13.14□□□□□ -0.31
LSG1-201ENST00000265245 EDC4Q6P2E9 1401 aaKnown RBP13.13□□□□□ -0.31
LSG1-201ENST00000265245 TRIM27P14373 513 aa13.13□□□□□ -0.31
LSG1-201ENST00000265245 ATF7IPQ6VMQ6 1270 aa13.13□□□□□ -0.31
LSG1-201ENST00000265245 TXNDC2Q86VQ3 553 aa13.13□□□□□ -0.31
LSG1-201ENST00000265245 DDX19BQ9UMR2 479 aa13.13□□□□□ -0.31
LSG1-201ENST00000265245 PPIP5K1Q6PFW1 1433 aa13.13□□□□□ -0.31
LSG1-201ENST00000265245 IPO8O15397 1037 aaKnown RBP13.12□□□□□ -0.31
LSG1-201ENST00000265245 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
LSG1-201ENST00000265245 METP08581 1390 aa13.12□□□□□ -0.31
LSG1-201ENST00000265245 SLC4A3P48751 1232 aa13.12□□□□□ -0.31
LSG1-201ENST00000265245 RSPH6AQ9H0K4 717 aa13.12□□□□□ -0.31
LSG1-201ENST00000265245 PDZRN3Q9UPQ7 1066 aa13.12□□□□□ -0.31
LSG1-201ENST00000265245 ITPRIPQ8IWB1 547 aa13.12□□□□□ -0.31
LSG1-201ENST00000265245 CCDC61Q9Y6R9 512 aa13.12□□□□□ -0.31
LSG1-201ENST00000265245 CALD1Q05682 793 aaKnown RBP13.11□□□□□ -0.31
LSG1-201ENST00000265245 UBR1Q8IWV7 1749 aa13.11□□□□□ -0.31
LSG1-201ENST00000265245 FBLN1P23142 703 aa13.11□□□□□ -0.31
LSG1-201ENST00000265245 NUDT16Q96DE0 195 aaKnown RBP13.11□□□□□ -0.31
LSG1-201ENST00000265245 SIRT1Q96EB6 747 aa13.11□□□□□ -0.31
LSG1-201ENST00000265245 CPSF1Q10570 1443 aaKnown RBP13.11□□□□□ -0.31
LSG1-201ENST00000265245 KIF20BQ96Q89 1820 aa13.11□□□□□ -0.31
LSG1-201ENST00000265245 CDC42BPGQ6DT37 1551 aa13.1□□□□□ -0.31
LSG1-201ENST00000265245 NME9Q86XW9 330 aa13.1□□□□□ -0.31
LSG1-201ENST00000265245 COG3Q96JB2 828 aa13.1□□□□□ -0.31
LSG1-201ENST00000265245 UPF2Q9HAU5 1272 aaKnown RBP13.1□□□□□ -0.31
LSG1-201ENST00000265245 NOB1Q9ULX3 412 aaKnown RBP13.1□□□□□ -0.31
LSG1-201ENST00000265245 FAM135BQ49AJ0 1406 aa13.1□□□□□ -0.31
LSG1-201ENST00000265245 EMILIN1Q9Y6C2 1016 aa13.1□□□□□ -0.31
LSG1-201ENST00000265245 NFE2L2Q16236 605 aa13.1□□□□□ -0.31
LSG1-201ENST00000265245 ALDH1L2Q3SY69 923 aa13.1□□□□□ -0.31
LSG1-201ENST00000265245 TNRQ92752 1358 aa13.1□□□□□ -0.31
LSG1-201ENST00000265245 ZNF428Q96B54 188 aa13.1□□□□□ -0.31
LSG1-201ENST00000265245 LRRC7Q96NW7 1537 aa13.1□□□□□ -0.31
LSG1-201ENST00000265245 HMOX1P09601 288 aa13.09□□□□□ -0.31
LSG1-201ENST00000265245 SETD1AO15047 1707 aaKnown RBP13.09□□□□□ -0.31
LSG1-201ENST00000265245 AATKQ6ZMQ8 1374 aa13.08□□□□□ -0.32
LSG1-201ENST00000265245 TECPR2O15040 1411 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms