RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SPATA31D1Q6ZQQ2 1576 aa12.03□□□□□ -0.48
SSR3-201ENST00000265044 SULT6B1Q6IMI4 303 aa12.03□□□□□ -0.48
SSR3-201ENST00000265044 SMG6Q86US8 1419 aaKnown RBP12.03□□□□□ -0.48
SSR3-201ENST00000265044 CSB-PGBD3P0DP91 1061 aa12.02□□□□□ -0.48
SSR3-201ENST00000265044 WWC1Q8IX03 1113 aa12.02□□□□□ -0.48
SSR3-201ENST00000265044 EXOC6Q8TAG9 804 aa12.02□□□□□ -0.48
SSR3-201ENST00000265044 PPLO60437 1756 aa12.02□□□□□ -0.48
SSR3-201ENST00000265044 ERICH6Q7L0X2 663 aa12.02□□□□□ -0.49
SSR3-201ENST00000265044 POLKQ9UBT6 870 aa12.02□□□□□ -0.49
SSR3-201ENST00000265044 REREQ9P2R6 1566 aa12.02□□□□□ -0.49
SSR3-201ENST00000265044 NEURL4Q96JN8 1562 aa12.01□□□□□ -0.49
SSR3-201ENST00000265044 CALD1Q05682 793 aaKnown RBP12.01□□□□□ -0.49
SSR3-201ENST00000265044 ADGRB1O14514 1584 aa12.01□□□□□ -0.49
SSR3-201ENST00000265044 IQGAP1P46940 1657 aa12.01□□□□□ -0.49
SSR3-201ENST00000265044 SMC4Q9NTJ3 1288 aa12.01□□□□□ -0.49
SSR3-201ENST00000265044 POLR3AO14802 1390 aaPredicted RBP12.01□□□□□ -0.49
SSR3-201ENST00000265044 KIAA1210Q9ULL0 1709 aa12□□□□□ -0.49
SSR3-201ENST00000265044 LMOD3Q0VAK6 560 aa12□□□□□ -0.49
SSR3-201ENST00000265044 FCHSD2O94868 740 aa12□□□□□ -0.49
SSR3-201ENST00000265044 TMPOP42166 694 aaKnown RBP12□□□□□ -0.49
SSR3-201ENST00000265044 PRR36Q9H6K5 1346 aa12□□□□□ -0.49
SSR3-201ENST00000265044 TSR2Q969E8 191 aaKnown RBP11.99□□□□□ -0.49
SSR3-201ENST00000265044 POLR1AO95602 1720 aaPredicted RBP11.99□□□□□ -0.49
SSR3-201ENST00000265044 QRICH2Q9H0J4 1663 aa11.99□□□□□ -0.49
SSR3-201ENST00000265044 SLFN5Q08AF3 891 aa11.99□□□□□ -0.49
SSR3-201ENST00000265044 MYO5BQ9ULV0 1848 aa11.99□□□□□ -0.49
SSR3-201ENST00000265044 HSP90AB2PQ58FF8 381 aa11.98□□□□□ -0.49
SSR3-201ENST00000265044 CRBNQ96SW2 442 aa11.98□□□□□ -0.49
SSR3-201ENST00000265044 PTPRMP28827 1452 aa11.98□□□□□ -0.49
SSR3-201ENST00000265044 TCERG1O14776 1098 aaKnown RBP11.97□□□□□ -0.49
SSR3-201ENST00000265044 ZBTB47Q9UFB7 747 aaPredicted RBP11.97□□□□□ -0.49
SSR3-201ENST00000265044 BCAR3O75815 825 aa11.97□□□□□ -0.49
SSR3-201ENST00000265044 FAM135BQ49AJ0 1406 aa11.97□□□□□ -0.49
SSR3-201ENST00000265044 PLEKHG3A1L390 1219 aa11.97□□□□□ -0.49
SSR3-201ENST00000265044 ORAI2Q96SN7 254 aa11.97□□□□□ -0.49
SSR3-201ENST00000265044 THUMPD2Q9BTF0 503 aaKnown RBP11.97□□□□□ -0.49
SSR3-201ENST00000265044 TULP4Q9NRJ4 1543 aa11.96□□□□□ -0.49
SSR3-201ENST00000265044 A0A0G2JS52 829 aa11.96□□□□□ -0.49
SSR3-201ENST00000265044 DUSP27Q5VZP5 1158 aa11.96□□□□□ -0.49
SSR3-201ENST00000265044 EDC4Q6P2E9 1401 aaKnown RBP11.96□□□□□ -0.49
SSR3-201ENST00000265044 ZC3H6P61129 1189 aaKnown RBP11.96□□□□□ -0.5
SSR3-201ENST00000265044 C19orf44Q9H6X5 657 aa11.96□□□□□ -0.5
SSR3-201ENST00000265044 ADAMTS13Q76LX8 1427 aa11.95□□□□□ -0.5
SSR3-201ENST00000265044 EXOSC9Q06265 439 aaKnown RBP11.95□□□□□ -0.5
SSR3-201ENST00000265044 WDR63Q8IWG1 891 aa11.95□□□□□ -0.5
SSR3-201ENST00000265044 COG6Q9Y2V7 657 aa11.95□□□□□ -0.5
SSR3-201ENST00000265044 TTC21AQ8NDW8 1320 aa11.94□□□□□ -0.5
SSR3-201ENST00000265044 KRT28Q7Z3Y7 464 aa11.94□□□□□ -0.5
SSR3-201ENST00000265044 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
SSR3-201ENST00000265044 IPO8O15397 1037 aaKnown RBP11.94□□□□□ -0.5
SSR3-201ENST00000265044 MS4A1P11836 297 aa11.94□□□□□ -0.5
SSR3-201ENST00000265044 RGS3P49796 1198 aa11.94□□□□□ -0.5
SSR3-201ENST00000265044 DCTN1Q14203 1278 aa11.94□□□□□ -0.5
SSR3-201ENST00000265044 ITPRIPQ8IWB1 547 aa11.93□□□□□ -0.5
SSR3-201ENST00000265044 NPHP4O75161 1426 aaPredicted RBP11.93□□□□□ -0.5
SSR3-201ENST00000265044 GNAI1P63096 354 aa11.93□□□□□ -0.5
SSR3-201ENST00000265044 NFE2L2Q16236 605 aa11.93□□□□□ -0.5
SSR3-201ENST00000265044 CADPS2Q86UW7 1296 aa11.93□□□□□ -0.5
SSR3-201ENST00000265044 SPINK5Q9NQ38 1064 aaPredicted RBP11.93□□□□□ -0.5
SSR3-201ENST00000265044 NLRP2Q9NX02 1062 aa11.93□□□□□ -0.5
SSR3-201ENST00000265044 FER1L4A9Z1Z3 1794 aa11.92□□□□□ -0.5
SSR3-201ENST00000265044 RIMS1Q86UR5 1692 aaKnown RBP11.92□□□□□ -0.5
SSR3-201ENST00000265044 AEBP1Q8IUX7 1158 aa11.92□□□□□ -0.5
SSR3-201ENST00000265044 USHBP1Q8N6Y0 703 aa11.92□□□□□ -0.5
SSR3-201ENST00000265044 EIF4A2Q14240 407 aaKnown RBP11.91□□□□□ -0.5
SSR3-201ENST00000265044 PANK1Q8TE04 598 aa11.91□□□□□ -0.5
SSR3-201ENST00000265044 SETD1BQ9UPS6 1966 aaKnown RBP11.91□□□□□ -0.5
SSR3-201ENST00000265044 KCNH5Q8NCM2 988 aa11.91□□□□□ -0.5
SSR3-201ENST00000265044 MAP3K19Q56UN5 1328 aa11.91□□□□□ -0.5
SSR3-201ENST00000265044 PHACTR3Q96KR7 559 aa11.91□□□□□ -0.5
SSR3-201ENST00000265044 DMRT2Q9Y5R5 561 aa11.91□□□□□ -0.5
SSR3-201ENST00000265044 ZKSCAN2Q63HK3 967 aa11.9□□□□□ -0.5
SSR3-201ENST00000265044 DAXXQ9UER7 740 aaPredicted RBP11.9□□□□□ -0.5
SSR3-201ENST00000265044 FAM83GA6ND36 823 aa11.9□□□□□ -0.5
SSR3-201ENST00000265044 ATP7BP35670 1465 aa11.9□□□□□ -0.5
SSR3-201ENST00000265044 IFT172Q9UG01 1749 aa11.9□□□□□ -0.51
SSR3-201ENST00000265044 C20orf194Q5TEA3 1177 aa11.89□□□□□ -0.51
SSR3-201ENST00000265044 MCM10Q7L590 875 aa11.89□□□□□ -0.51
SSR3-201ENST00000265044 C1orf141Q5JVX7 400 aa11.89□□□□□ -0.51
SSR3-201ENST00000265044 DDX17Q92841 729 aaKnown RBP11.89□□□□□ -0.51
SSR3-201ENST00000265044 BLMP54132 1417 aaPredicted RBP11.89□□□□□ -0.51
SSR3-201ENST00000265044 PTPRUQ92729 1446 aa11.89□□□□□ -0.51
SSR3-201ENST00000265044 TEFQ10587 303 aa11.89□□□□□ -0.51
SSR3-201ENST00000265044 GAS2L2Q8NHY3 880 aa11.89□□□□□ -0.51
SSR3-201ENST00000265044 TSPYL4Q9UJ04 414 aa11.89□□□□□ -0.51
SSR3-201ENST00000265044 PIK3R4Q99570 1358 aa11.89□□□□□ -0.51
SSR3-201ENST00000265044 NECTIN2Q92692 538 aa11.88□□□□□ -0.51
SSR3-201ENST00000265044 MSH6P52701 1360 aa11.88□□□□□ -0.51
SSR3-201ENST00000265044 IL13P35225 146 aa11.88□□□□□ -0.51
SSR3-201ENST00000265044 ARHGEF28Q8N1W1 1705 aaKnown RBP11.88□□□□□ -0.51
SSR3-201ENST00000265044 RAPGEF4Q8WZA2 1011 aa11.88□□□□□ -0.51
SSR3-201ENST00000265044 EVA1CP58658 441 aa11.87□□□□□ -0.51
SSR3-201ENST00000265044 DLC1Q96QB1 1528 aa11.87□□□□□ -0.51
SSR3-201ENST00000265044 STK31Q9BXU1 1019 aa11.87□□□□□ -0.51
SSR3-201ENST00000265044 RSPH6AQ9H0K4 717 aa11.87□□□□□ -0.51
SSR3-201ENST00000265044 NKTRP30414 1462 aaKnown RBP11.87□□□□□ -0.51
SSR3-201ENST00000265044 FANCIQ9NVI1 1328 aa11.87□□□□□ -0.51
SSR3-201ENST00000265044 CABLES1Q8TDN4 633 aa11.87□□□□□ -0.51
SSR3-201ENST00000265044 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
SSR3-201ENST00000265044 CEP170BQ9Y4F5 1589 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms