RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 CGNQ9P2M7 1197 aaKnown RBP14.01□□□□□ -0.17
DNMT3A-201ENST00000264709 PIK3C2GO75747 1445 aa14.01□□□□□ -0.17
DNMT3A-201ENST00000264709 CHD1LQ86WJ1 897 aa14.01□□□□□ -0.17
DNMT3A-201ENST00000264709 ANKRD20A12PQ8NF67 263 aa14.01□□□□□ -0.17
DNMT3A-201ENST00000264709 UVSSAQ2YD98 709 aa14.01□□□□□ -0.17
DNMT3A-201ENST00000264709 SMAP1Q8IYB5 467 aaPredicted RBP14.01□□□□□ -0.17
DNMT3A-201ENST00000264709 HIP1O00291 1037 aa14□□□□□ -0.17
DNMT3A-201ENST00000264709 ANO2Q9NQ90 1003 aa14□□□□□ -0.17
DNMT3A-201ENST00000264709 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
DNMT3A-201ENST00000264709 CREBRFQ8IUR6 639 aa14□□□□□ -0.17
DNMT3A-201ENST00000264709 PRPF40AO75400 957 aaKnown RBP14□□□□□ -0.17
DNMT3A-201ENST00000264709 ALDH1L2Q3SY69 923 aa14□□□□□ -0.17
DNMT3A-201ENST00000264709 TUBB4AP04350 444 aa14□□□□□ -0.17
DNMT3A-201ENST00000264709 LEKR1Q6ZMV7 388 aa14□□□□□ -0.17
DNMT3A-201ENST00000264709 SF3A1Q15459 793 aaKnown RBP14□□□□□ -0.17
DNMT3A-201ENST00000264709 RIPK4P57078 832 aa13.99□□□□□ -0.17
DNMT3A-201ENST00000264709 DUSP27Q5VZP5 1158 aa13.99□□□□□ -0.17
DNMT3A-201ENST00000264709 TNPO1Q92973 898 aaKnown RBP13.99□□□□□ -0.17
DNMT3A-201ENST00000264709 HSP90B1P14625 803 aaKnown RBP13.99□□□□□ -0.17
DNMT3A-201ENST00000264709 NAP1L2Q9ULW6 460 aaPredicted RBP13.99□□□□□ -0.17
DNMT3A-201ENST00000264709 KINO60870 393 aaKnown RBP13.99□□□□□ -0.17
DNMT3A-201ENST00000264709 ANKRD1Q15327 319 aa13.99□□□□□ -0.17
DNMT3A-201ENST00000264709 ZNF592Q92610 1267 aa13.99□□□□□ -0.17
DNMT3A-201ENST00000264709 HNRNPMP52272 730 aaKnown RBP eCLIP13.99□□□□□ -0.17
DNMT3A-201ENST00000264709 BICD2Q8TD16 824 aa13.99□□□□□ -0.17
DNMT3A-201ENST00000264709 HDAC1Q13547 482 aaPredicted RBP13.98□□□□□ -0.17
DNMT3A-201ENST00000264709 CCDC94Q9BW85 323 aaPredicted RBP13.98□□□□□ -0.17
DNMT3A-201ENST00000264709 ABCC5O15440 1437 aa13.98□□□□□ -0.17
DNMT3A-201ENST00000264709 CLSTN1O94985 981 aa13.98□□□□□ -0.17
DNMT3A-201ENST00000264709 KIAA0586Q9BVV6 1533 aa13.98□□□□□ -0.17
DNMT3A-201ENST00000264709 EIF3JO75822 258 aaKnown RBP13.98□□□□□ -0.17
DNMT3A-201ENST00000264709 C8orf34Q49A92 452 aa13.98□□□□□ -0.17
DNMT3A-201ENST00000264709 NPC1L1Q9UHC9 1359 aa13.98□□□□□ -0.17
DNMT3A-201ENST00000264709 SNAPC4Q5SXM2 1469 aa13.98□□□□□ -0.17
DNMT3A-201ENST00000264709 ZBTB7CA1YPR0 619 aa13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 FAM107BQ9H098 131 aa13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 ERLIN1O75477 346 aa13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 GNAI3P08754 354 aa13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 CCDC183Q5T5S1 534 aa13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 NEK4P51957 841 aa13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 WWC1Q8IX03 1113 aa13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 CPLX2Q6PUV4 134 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 KDM5AP29375 1690 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 NBPF1Q3BBV0 1214 aa13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 IBTKQ9P2D0 1353 aaPredicted RBP13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 SCAF11Q99590 1463 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 RNF214Q8ND24 703 aa13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 PAXBP1Q9Y5B6 917 aa13.97□□□□□ -0.17
DNMT3A-201ENST00000264709 PTPRGP23470 1445 aa13.96□□□□□ -0.17
DNMT3A-201ENST00000264709 KRT85P78386 507 aa13.96□□□□□ -0.17
DNMT3A-201ENST00000264709 TPD52L1Q16890 204 aaPredicted RBP13.96□□□□□ -0.17
DNMT3A-201ENST00000264709 ZKSCAN5Q9Y2L8 839 aa13.96□□□□□ -0.17
DNMT3A-201ENST00000264709 RAPGEF6Q8TEU7 1601 aa13.96□□□□□ -0.17
DNMT3A-201ENST00000264709 CDK13Q14004 1512 aaKnown RBP13.96□□□□□ -0.17
DNMT3A-201ENST00000264709 IL16Q14005 1332 aa13.96□□□□□ -0.18
DNMT3A-201ENST00000264709 FEZ1Q99689 392 aa13.96□□□□□ -0.18
DNMT3A-201ENST00000264709 SMC5Q8IY18 1101 aa13.95□□□□□ -0.18
DNMT3A-201ENST00000264709 CDR1P51861 262 aa13.95□□□□□ -0.18
DNMT3A-201ENST00000264709 RBM10P98175 930 aaKnown RBP13.95□□□□□ -0.18
DNMT3A-201ENST00000264709 RARSP54136 660 aaKnown RBP13.94□□□□□ -0.18
DNMT3A-201ENST00000264709 BCAR3O75815 825 aa13.94□□□□□ -0.18
DNMT3A-201ENST00000264709 RILPL2Q969X0 211 aa13.94□□□□□ -0.18
DNMT3A-201ENST00000264709 COL17A1Q9UMD9 1497 aaPredicted RBP13.94□□□□□ -0.18
DNMT3A-201ENST00000264709 KDM5DQ9BY66 1539 aa13.94□□□□□ -0.18
DNMT3A-201ENST00000264709 SAMD9Q5K651 1589 aa13.93□□□□□ -0.18
DNMT3A-201ENST00000264709 VPS37CA5D8V6 355 aaPredicted RBP13.93□□□□□ -0.18
DNMT3A-201ENST00000264709 KIF18AQ8NI77 898 aa13.93□□□□□ -0.18
DNMT3A-201ENST00000264709 SCAND2PQ9GZW5 306 aaPredicted RBP13.93□□□□□ -0.18
DNMT3A-201ENST00000264709 TMX4Q9H1E5 349 aaPredicted RBP13.93□□□□□ -0.18
DNMT3A-201ENST00000264709 NOL7Q9UMY1 257 aaKnown RBP13.93□□□□□ -0.18
DNMT3A-201ENST00000264709 ZSCAN31Q96LW9 406 aaPredicted RBP13.93□□□□□ -0.18
DNMT3A-201ENST00000264709 DEF6Q9H4E7 631 aa13.93□□□□□ -0.18
DNMT3A-201ENST00000264709 SYCE3A1L190 88 aa13.93□□□□□ -0.18
DNMT3A-201ENST00000264709 CCDC27Q2M243 656 aa13.93□□□□□ -0.18
DNMT3A-201ENST00000264709 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
DNMT3A-201ENST00000264709 CNTROBQ8N137 903 aa13.92□□□□□ -0.18
DNMT3A-201ENST00000264709 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
DNMT3A-201ENST00000264709 NOL8Q76FK4 1167 aaKnown RBP13.92□□□□□ -0.18
DNMT3A-201ENST00000264709 ZNF644Q9H582 1327 aaPredicted RBP13.92□□□□□ -0.18
DNMT3A-201ENST00000264709 KIF3BO15066 747 aa13.92□□□□□ -0.18
DNMT3A-201ENST00000264709 JMYQ8N9B5 988 aa13.92□□□□□ -0.18
DNMT3A-201ENST00000264709 CFAP45Q9UL16 551 aa13.92□□□□□ -0.18
DNMT3A-201ENST00000264709 CCT4P50991 539 aaKnown RBP13.92□□□□□ -0.18
DNMT3A-201ENST00000264709 FOXD4L5Q5VV16 416 aaPredicted RBP13.92□□□□□ -0.18
DNMT3A-201ENST00000264709 FOXD4L4Q8WXT5 416 aaPredicted RBP13.92□□□□□ -0.18
DNMT3A-201ENST00000264709 CEP57L1Q8IYX8 460 aa13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 KDM2BQ8NHM5 1336 aa13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 PRAG1Q86YV5 1406 aa13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 JPH4Q96JJ6 628 aa13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 COG3Q96JB2 828 aa13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 DNAJC2Q99543 621 aaKnown RBP13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 TUBB4BP68371 445 aa13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 FAM193AP78312 1265 aa13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 MAGI1Q96QZ7 1491 aaPredicted RBP13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 RPAP2Q8IXW5 612 aaPredicted RBP13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 KDM5CP41229 1560 aa13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 DHX16O60231 1041 aaKnown RBP13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 ZNF396Q96N95 335 aaPredicted RBP13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 RAB3GAP1Q15042 981 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms