RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 DISP3Q9P2K9 1392 aa18.13■□□□□ 0.49
CASC3-201ENST00000264645 ABCC5O15440 1437 aa18.13■□□□□ 0.49
CASC3-201ENST00000264645 FOSBP53539 338 aa18.12■□□□□ 0.49
CASC3-201ENST00000264645 FKBP5Q13451 457 aaPredicted RBP18.12■□□□□ 0.49
CASC3-201ENST00000264645 RAB3GAP1Q15042 981 aa18.12■□□□□ 0.49
CASC3-201ENST00000264645 GAS2L2Q8NHY3 880 aa18.12■□□□□ 0.49
CASC3-201ENST00000264645 FAM177BA6PVY3 158 aa18.12■□□□□ 0.49
CASC3-201ENST00000264645 RUFY2Q8WXA3 655 aa18.12■□□□□ 0.49
CASC3-201ENST00000264645 BMP2KLQ5H9B9 411 aa18.11■□□□□ 0.49
CASC3-201ENST00000264645 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
CASC3-201ENST00000264645 CREBRFQ8IUR6 639 aa18.11■□□□□ 0.49
CASC3-201ENST00000264645 TAF3Q5VWG9 929 aa18.1■□□□□ 0.49
CASC3-201ENST00000264645 C9orf84Q5VXU9 1444 aa18.1■□□□□ 0.49
CASC3-201ENST00000264645 ADCY5O95622 1261 aa18.1■□□□□ 0.49
CASC3-201ENST00000264645 TTC12Q9H892 705 aaPredicted RBP18.1■□□□□ 0.49
CASC3-201ENST00000264645 PRIMPOLQ96LW4 560 aa18.09■□□□□ 0.49
CASC3-201ENST00000264645 STAC3Q96MF2 364 aa18.09■□□□□ 0.49
CASC3-201ENST00000264645 CDK13Q14004 1512 aaKnown RBP18.09■□□□□ 0.49
CASC3-201ENST00000264645 LRSAM1Q6UWE0 723 aa18.09■□□□□ 0.49
CASC3-201ENST00000264645 SMC5Q8IY18 1101 aa18.09■□□□□ 0.49
CASC3-201ENST00000264645 C16orf45Q96MC5 204 aaPredicted RBP18.09■□□□□ 0.49
CASC3-201ENST00000264645 FMNL2Q96PY5 1086 aa18.09■□□□□ 0.49
CASC3-201ENST00000264645 TMPOP42166 694 aaKnown RBP18.09■□□□□ 0.49
CASC3-201ENST00000264645 NOLC1Q14978 699 aaKnown RBP eCLIP18.08■□□□□ 0.492e-7■■■■□ 23.5
CASC3-201ENST00000264645 CCDC73Q6ZRK6 1079 aa18.08■□□□□ 0.49
CASC3-201ENST00000264645 FILIP1Q7Z7B0 1213 aa18.08■□□□□ 0.49
CASC3-201ENST00000264645 PER1O15534 1290 aaPredicted RBP18.08■□□□□ 0.49
CASC3-201ENST00000264645 SNX21Q969T3 373 aa18.08■□□□□ 0.49
CASC3-201ENST00000264645 CCDC94Q9BW85 323 aaPredicted RBP18.08■□□□□ 0.49
CASC3-201ENST00000264645 NUTM2FA1L443 756 aa18.08■□□□□ 0.48
CASC3-201ENST00000264645 HCLS1P14317 486 aaPredicted RBP18.07■□□□□ 0.48
CASC3-201ENST00000264645 GAS2L3Q86XJ1 694 aa18.07■□□□□ 0.48
CASC3-201ENST00000264645 SMAP1Q8IYB5 467 aaPredicted RBP18.07■□□□□ 0.48
CASC3-201ENST00000264645 SDF4Q9BRK5 362 aa18.07■□□□□ 0.48
CASC3-201ENST00000264645 TNMDQ9H2S6 317 aa18.07■□□□□ 0.48
CASC3-201ENST00000264645 CCDC9Q9Y3X0 531 aaKnown RBP18.07■□□□□ 0.48
CASC3-201ENST00000264645 PDE4CQ08493 712 aa18.06■□□□□ 0.48
CASC3-201ENST00000264645 LMOD2Q6P5Q4 547 aa18.06■□□□□ 0.48
CASC3-201ENST00000264645 SMARCA5O60264 1052 aaPredicted RBP18.06■□□□□ 0.48
CASC3-201ENST00000264645 THUMPD2Q9BTF0 503 aaKnown RBP18.06■□□□□ 0.48
CASC3-201ENST00000264645 HS1BP3Q53T59 392 aa18.06■□□□□ 0.48
CASC3-201ENST00000264645 RBSNQ9H1K0 784 aa18.06■□□□□ 0.48
CASC3-201ENST00000264645 NOL7Q9UMY1 257 aaKnown RBP18.05■□□□□ 0.48
CASC3-201ENST00000264645 PRDM2Q13029 1718 aa18.05■□□□□ 0.48
CASC3-201ENST00000264645 CEBPZQ03701 1054 aaKnown RBP18.05■□□□□ 0.48
CASC3-201ENST00000264645 EPRSP07814 1512 aaKnown RBP18.05■□□□□ 0.48
CASC3-201ENST00000264645 CAMK4Q16566 473 aa18.04■□□□□ 0.48
CASC3-201ENST00000264645 NCAPD3P42695 1498 aa18.04■□□□□ 0.48
CASC3-201ENST00000264645 FSD2A1L4K1 749 aa18.04■□□□□ 0.48
CASC3-201ENST00000264645 CCDC183Q5T5S1 534 aa18.04■□□□□ 0.48
CASC3-201ENST00000264645 HDAC1Q13547 482 aaPredicted RBP18.03■□□□□ 0.48
CASC3-201ENST00000264645 COG3Q96JB2 828 aa18.03■□□□□ 0.48
CASC3-201ENST00000264645 VGFO15240 615 aaPredicted RBP18.03■□□□□ 0.48
CASC3-201ENST00000264645 TNNT1P13805 278 aa18.03■□□□□ 0.48
CASC3-201ENST00000264645 FERMT3Q86UX7 667 aa18.03■□□□□ 0.48
CASC3-201ENST00000264645 SURF6O75683 361 aaKnown RBP18.02■□□□□ 0.48
CASC3-201ENST00000264645 AEBP1Q8IUX7 1158 aa18.02■□□□□ 0.48
CASC3-201ENST00000264645 SCAPERQ9BY12 1400 aa18.02■□□□□ 0.48
CASC3-201ENST00000264645 CWC15Q9P013 229 aaKnown RBP18.02■□□□□ 0.48
CASC3-201ENST00000264645 IFIT2P09913 472 aaKnown RBP18.02■□□□□ 0.48
CASC3-201ENST00000264645 KRT85P78386 507 aa18.02■□□□□ 0.48
CASC3-201ENST00000264645 NOM1Q5C9Z4 860 aaKnown RBP18.02■□□□□ 0.48
CASC3-201ENST00000264645 NUP62CLQ9H1M0 184 aa18.02■□□□□ 0.48
CASC3-201ENST00000264645 SMC2O95347 1197 aa18.02■□□□□ 0.47
CASC3-201ENST00000264645 EIF2S2P20042 333 aaKnown RBP18.02■□□□□ 0.47
CASC3-201ENST00000264645 SKIDA1Q1XH10 827 aa18.02■□□□□ 0.47
CASC3-201ENST00000264645 LTV1Q96GA3 475 aaPredicted RBP18.02■□□□□ 0.47
CASC3-201ENST00000264645 MAP4K4O95819 1239 aaPredicted RBP18.01■□□□□ 0.47
CASC3-201ENST00000264645 NUCB1Q02818 461 aa18.01■□□□□ 0.47
CASC3-201ENST00000264645 GPRASP1Q5JY77 1395 aa18.01■□□□□ 0.47
CASC3-201ENST00000264645 RNF20Q5VTR2 975 aa18.01■□□□□ 0.47
CASC3-201ENST00000264645 TSC1Q92574 1164 aa18.01■□□□□ 0.47
CASC3-201ENST00000264645 LARP1BQ659C4 914 aaKnown RBP18■□□□□ 0.47
CASC3-201ENST00000264645 HSP90B2PQ58FF3 399 aa18■□□□□ 0.47
CASC3-201ENST00000264645 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18■□□□□ 0.471e-6■■□□□ 14.4
CASC3-201ENST00000264645 LARP6Q9BRS8 491 aaKnown RBP18■□□□□ 0.47
CASC3-201ENST00000264645 EXOC6BQ9Y2D4 811 aa18■□□□□ 0.47
CASC3-201ENST00000264645 KINO60870 393 aaKnown RBP18■□□□□ 0.47
CASC3-201ENST00000264645 PDCP20941 246 aa18■□□□□ 0.47
CASC3-201ENST00000264645 TSPYL4Q9UJ04 414 aa18■□□□□ 0.47
CASC3-201ENST00000264645 DMRT2Q9Y5R5 561 aa18■□□□□ 0.47
CASC3-201ENST00000264645 FAM177A1Q8N128 213 aaPredicted RBP17.99■□□□□ 0.47
CASC3-201ENST00000264645 ZGPATQ8N5A5 531 aaKnown RBP17.99■□□□□ 0.47
CASC3-201ENST00000264645 NSD3Q9BZ95 1437 aa17.99■□□□□ 0.47
CASC3-201ENST00000264645 MAP3K11Q16584 847 aa17.99■□□□□ 0.47
CASC3-201ENST00000264645 GTPBP4Q9BZE4 634 aaKnown RBP17.99■□□□□ 0.47
CASC3-201ENST00000264645 PTPN14Q15678 1187 aa17.99■□□□□ 0.47
CASC3-201ENST00000264645 SLC4A2P04920 1241 aa17.98■□□□□ 0.47
CASC3-201ENST00000264645 NOC3LQ8WTT2 800 aaKnown RBP17.98■□□□□ 0.47
CASC3-201ENST00000264645 TROQ12816 1431 aaPredicted RBP17.98■□□□□ 0.47
CASC3-201ENST00000264645 AMPHP49418 695 aa17.98■□□□□ 0.47
CASC3-201ENST00000264645 HDAC5Q9UQL6 1122 aa17.98■□□□□ 0.47
CASC3-201ENST00000264645 SETQ01105 290 aaPredicted RBP17.98■□□□□ 0.47
CASC3-201ENST00000264645 NAT10Q9H0A0 1025 aaKnown RBP17.98■□□□□ 0.47
CASC3-201ENST00000264645 ANTXR1Q9H6X2 564 aa17.97■□□□□ 0.47
CASC3-201ENST00000264645 UBTFL1P0CB47 393 aaPredicted RBP17.97■□□□□ 0.47
CASC3-201ENST00000264645 MLECQ14165 292 aa17.97■□□□□ 0.47
CASC3-201ENST00000264645 CKAP2LQ8IYA6 745 aa17.97■□□□□ 0.47
CASC3-201ENST00000264645 CNTROBQ8N137 903 aa17.97■□□□□ 0.47
CASC3-201ENST00000264645 LRRCC1Q9C099 1032 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 409.7 ms