RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 RGPD8O14715 1765 aaPredicted RBP20.9■□□□□ 0.94
VPS26A-201ENST00000263559 FBLN1P23142 703 aa20.89■□□□□ 0.93
VPS26A-201ENST00000263559 COL3A1P02461 1466 aaPredicted RBP20.89■□□□□ 0.93
VPS26A-201ENST00000263559 MAP2P11137 1827 aaKnown RBP20.89■□□□□ 0.93
VPS26A-201ENST00000263559 NPHP4O75161 1426 aaPredicted RBP20.88■□□□□ 0.93
VPS26A-201ENST00000263559 RUNDC1Q96C34 613 aa20.87■□□□□ 0.93
VPS26A-201ENST00000263559 U2AF1L5P0DN76 240 aaPredicted RBP20.86■□□□□ 0.93
VPS26A-201ENST00000263559 U2AF1Q01081 240 aaKnown RBP eCLIP20.86■□□□□ 0.93
VPS26A-201ENST00000263559 GOLGA2Q08379 1002 aa20.86■□□□□ 0.93
VPS26A-201ENST00000263559 POLKQ9UBT6 870 aa20.86■□□□□ 0.93
VPS26A-201ENST00000263559 ERICH6BQ5W0A0 696 aa20.86■□□□□ 0.93
VPS26A-201ENST00000263559 PNPLA6Q8IY17 1366 aa20.86■□□□□ 0.93
VPS26A-201ENST00000263559 NRKQ7Z2Y5 1582 aa20.86■□□□□ 0.93
VPS26A-201ENST00000263559 RCAN3Q9UKA8 241 aa20.85■□□□□ 0.93
VPS26A-201ENST00000263559 NGEFQ8N5V2 710 aa20.85■□□□□ 0.93
VPS26A-201ENST00000263559 COG3Q96JB2 828 aa20.85■□□□□ 0.93
VPS26A-201ENST00000263559 TTC21BQ7Z4L5 1316 aa20.85■□□□□ 0.93
VPS26A-201ENST00000263559 PMFBP1Q8TBY8 1022 aa20.84■□□□□ 0.93
VPS26A-201ENST00000263559 USP6P35125 1406 aa20.84■□□□□ 0.93
VPS26A-201ENST00000263559 TCP11L2Q8N4U5 519 aa20.83■□□□□ 0.92
VPS26A-201ENST00000263559 U2SURPO15042 1029 aaKnown RBP20.82■□□□□ 0.92
VPS26A-201ENST00000263559 DUSP27Q5VZP5 1158 aa20.82■□□□□ 0.92
VPS26A-201ENST00000263559 FMN2Q9NZ56 1722 aa20.82■□□□□ 0.92
VPS26A-201ENST00000263559 PPM1GO15355 546 aaPredicted RBP20.82■□□□□ 0.92
VPS26A-201ENST00000263559 DIAPH1O60610 1272 aaKnown RBP20.82■□□□□ 0.92
VPS26A-201ENST00000263559 NALCNQ8IZF0 1738 aa20.82■□□□□ 0.92
VPS26A-201ENST00000263559 SLFN5Q08AF3 891 aa20.81■□□□□ 0.92
VPS26A-201ENST00000263559 RBM33Q96EV2 1170 aaKnown RBP20.81■□□□□ 0.92
VPS26A-201ENST00000263559 IQSEC2Q5JU85 1478 aa20.81■□□□□ 0.92
VPS26A-201ENST00000263559 AATKQ6ZMQ8 1374 aa20.81■□□□□ 0.92
VPS26A-201ENST00000263559 EMILIN1Q9Y6C2 1016 aa20.81■□□□□ 0.92
VPS26A-201ENST00000263559 ANKARQ7Z5J8 1434 aa20.8■□□□□ 0.92
VPS26A-201ENST00000263559 RRP7AQ9Y3A4 280 aaKnown RBP20.8■□□□□ 0.92
VPS26A-201ENST00000263559 NEUROD2Q15784 382 aa20.8■□□□□ 0.92
VPS26A-201ENST00000263559 SPINK5Q9NQ38 1064 aaPredicted RBP20.8■□□□□ 0.92
VPS26A-201ENST00000263559 SSH2Q76I76 1423 aa20.79■□□□□ 0.92
VPS26A-201ENST00000263559 WWC1Q8IX03 1113 aa20.79■□□□□ 0.92
VPS26A-201ENST00000263559 NGDNQ8NEJ9 315 aaKnown RBP20.79■□□□□ 0.92
VPS26A-201ENST00000263559 TRMT2AQ8IZ69 625 aaKnown RBP20.79■□□□□ 0.92
VPS26A-201ENST00000263559 DMRT2Q9Y5R5 561 aa20.79■□□□□ 0.92
VPS26A-201ENST00000263559 RRP1P56182 461 aaKnown RBP20.78■□□□□ 0.92
VPS26A-201ENST00000263559 PPP4R2Q9NY27 417 aa20.77■□□□□ 0.92
VPS26A-201ENST00000263559 RRS1Q15050 365 aaKnown RBP20.77■□□□□ 0.92
VPS26A-201ENST00000263559 PLEKHF1Q96S99 279 aa20.77■□□□□ 0.92
VPS26A-201ENST00000263559 OVOS2A0A0J9YW53 1432 aa20.76■□□□□ 0.91
VPS26A-201ENST00000263559 OVOS2Q6IE36 1432 aa20.76■□□□□ 0.91
VPS26A-201ENST00000263559 E9PSI1 815 aa20.75■□□□□ 0.91
VPS26A-201ENST00000263559 PHF23Q9BUL5 403 aaPredicted RBP20.75■□□□□ 0.91
VPS26A-201ENST00000263559 CDK12Q9NYV4 1490 aaPredicted RBP20.74■□□□□ 0.91
VPS26A-201ENST00000263559 TTC21AQ8NDW8 1320 aa20.74■□□□□ 0.91
VPS26A-201ENST00000263559 ADGRL3Q9HAR2 1447 aa20.73■□□□□ 0.91
VPS26A-201ENST00000263559 CCDC27Q2M243 656 aa20.73■□□□□ 0.91
VPS26A-201ENST00000263559 NWD1Q149M9 1564 aa20.72■□□□□ 0.91
VPS26A-201ENST00000263559 NCBP3Q53F19 620 aaKnown RBP20.72■□□□□ 0.91
VPS26A-201ENST00000263559 PELP1Q8IZL8 1130 aaKnown RBP20.72■□□□□ 0.91
VPS26A-201ENST00000263559 IL13P35225 146 aa20.71■□□□□ 0.91
VPS26A-201ENST00000263559 USP31Q70CQ4 1352 aa20.7■□□□□ 0.9
VPS26A-201ENST00000263559 FCHSD2O94868 740 aa20.7■□□□□ 0.9
VPS26A-201ENST00000263559 MAPK8IP3Q9UPT6 1336 aa20.7■□□□□ 0.9
VPS26A-201ENST00000263559 WDR63Q8IWG1 891 aa20.7■□□□□ 0.9
VPS26A-201ENST00000263559 PNNQ9H307 717 aaKnown RBP20.7■□□□□ 0.9
VPS26A-201ENST00000263559 TMPOP42166 694 aaKnown RBP20.69■□□□□ 0.9
VPS26A-201ENST00000263559 C14orf37Q86TY3 774 aa20.69■□□□□ 0.9
VPS26A-201ENST00000263559 PHF8Q9UPP1 1060 aa20.69■□□□□ 0.9
VPS26A-201ENST00000263559 PIK3C2AO00443 1686 aa20.68■□□□□ 0.9
VPS26A-201ENST00000263559 RSPH6AQ9H0K4 717 aa20.68■□□□□ 0.9
VPS26A-201ENST00000263559 LRRC7Q96NW7 1537 aa20.68■□□□□ 0.9
VPS26A-201ENST00000263559 PLIN1O60240 522 aa20.68■□□□□ 0.9
VPS26A-201ENST00000263559 B4GALNT3Q6L9W6 998 aa20.67■□□□□ 0.9
VPS26A-201ENST00000263559 PROSER2Q86WR7 435 aaPredicted RBP20.67■□□□□ 0.9
VPS26A-201ENST00000263559 KDM4FA0A1W2PPD8 638 aa20.67■□□□□ 0.9
VPS26A-201ENST00000263559 SOX12O15370 315 aa20.66■□□□□ 0.9
VPS26A-201ENST00000263559 HMOX1P09601 288 aa20.66■□□□□ 0.9
VPS26A-201ENST00000263559 HSPA2P54652 639 aa20.66■□□□□ 0.9
VPS26A-201ENST00000263559 PRKAR2BP31323 418 aa20.66■□□□□ 0.9
VPS26A-201ENST00000263559 PEAK1Q9H792 1746 aa20.65■□□□□ 0.9
VPS26A-201ENST00000263559 ESCO1Q5FWF5 840 aa20.65■□□□□ 0.9
VPS26A-201ENST00000263559 TRIM35Q9UPQ4 493 aa20.64■□□□□ 0.9
VPS26A-201ENST00000263559 NLRP6P59044 892 aa20.64■□□□□ 0.89
VPS26A-201ENST00000263559 RIPK4P57078 832 aa20.63■□□□□ 0.89
VPS26A-201ENST00000263559 PAK3O75914 559 aaPredicted RBP20.62■□□□□ 0.89
VPS26A-201ENST00000263559 EXOC6Q8TAG9 804 aa20.62■□□□□ 0.89
VPS26A-201ENST00000263559 MARF1Q9Y4F3 1742 aaKnown RBP20.62■□□□□ 0.89
VPS26A-201ENST00000263559 EIF4A2Q14240 407 aaKnown RBP20.61■□□□□ 0.89
VPS26A-201ENST00000263559 NUTM2GQ5VZR2 741 aa20.61■□□□□ 0.89
VPS26A-201ENST00000263559 PHACTR3Q96KR7 559 aa20.61■□□□□ 0.89
VPS26A-201ENST00000263559 HSP90AB2PQ58FF8 381 aa20.61■□□□□ 0.89
VPS26A-201ENST00000263559 ABTB2Q8N961 1025 aa20.61■□□□□ 0.89
VPS26A-201ENST00000263559 STRCP1A6NGW2 1772 aa20.61■□□□□ 0.89
VPS26A-201ENST00000263559 MAP3K19Q56UN5 1328 aa20.61■□□□□ 0.89
VPS26A-201ENST00000263559 NEFMP07197 916 aa20.61■□□□□ 0.89
VPS26A-201ENST00000263559 ORAI2Q96SN7 254 aa20.6■□□□□ 0.89
VPS26A-201ENST00000263559 USP54Q70EL1 1684 aa20.59■□□□□ 0.89
VPS26A-201ENST00000263559 PSME1Q06323 249 aa20.58■□□□□ 0.89
VPS26A-201ENST00000263559 MYH16Q9H6N6 1097 aa20.58■□□□□ 0.89
VPS26A-201ENST00000263559 C19orf44Q9H6X5 657 aa20.58■□□□□ 0.89
VPS26A-201ENST00000263559 BCAR3O75815 825 aa20.57■□□□□ 0.88
VPS26A-201ENST00000263559 C20orf194Q5TEA3 1177 aa20.57■□□□□ 0.88
VPS26A-201ENST00000263559 CCDC136Q96JN2 1154 aa20.57■□□□□ 0.88
VPS26A-201ENST00000263559 SBNO1A3KN83 1393 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms