RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 HMOX1P09601 288 aa13.57□□□□□ -0.24
COMMD9-201ENST00000263401 PDE4AP27815 886 aa13.57□□□□□ -0.24
COMMD9-201ENST00000263401 NUDT16Q96DE0 195 aaKnown RBP13.57□□□□□ -0.24
COMMD9-201ENST00000263401 KDM2BQ8NHM5 1336 aa13.57□□□□□ -0.24
COMMD9-201ENST00000263401 ROBO2Q9HCK4 1378 aa13.57□□□□□ -0.24
COMMD9-201ENST00000263401 RLBP1P12271 317 aa13.56□□□□□ -0.24
COMMD9-201ENST00000263401 RARSP54136 660 aaKnown RBP13.56□□□□□ -0.24
COMMD9-201ENST00000263401 RRS1Q15050 365 aaKnown RBP13.56□□□□□ -0.24
COMMD9-201ENST00000263401 POLKQ9UBT6 870 aa13.56□□□□□ -0.24
COMMD9-201ENST00000263401 ANKRD26Q9UPS8 1709 aa13.56□□□□□ -0.24
COMMD9-201ENST00000263401 UBR1Q8IWV7 1749 aa13.56□□□□□ -0.24
COMMD9-201ENST00000263401 DIAPH1O60610 1272 aaKnown RBP13.56□□□□□ -0.24
COMMD9-201ENST00000263401 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.56□□□□□ -0.24
COMMD9-201ENST00000263401 PRR36Q9H6K5 1346 aa13.56□□□□□ -0.24
COMMD9-201ENST00000263401 TMEM2Q9UHN6 1383 aa13.56□□□□□ -0.24
COMMD9-201ENST00000263401 TMPOP42166 694 aaKnown RBP13.56□□□□□ -0.24
COMMD9-201ENST00000263401 RGS3P49796 1198 aa13.56□□□□□ -0.24
COMMD9-201ENST00000263401 TRIM35Q9UPQ4 493 aa13.56□□□□□ -0.24
COMMD9-201ENST00000263401 MAP2P11137 1827 aaKnown RBP13.55□□□□□ -0.24
COMMD9-201ENST00000263401 TRHP20396 242 aaPredicted RBP13.55□□□□□ -0.24
COMMD9-201ENST00000263401 DLC1Q96QB1 1528 aa13.55□□□□□ -0.24
COMMD9-201ENST00000263401 TCERG1O14776 1098 aaKnown RBP13.55□□□□□ -0.24
COMMD9-201ENST00000263401 IGHDP01880 384 aa13.55□□□□□ -0.24
COMMD9-201ENST00000263401 MAPK8IP3Q9UPT6 1336 aa13.54□□□□□ -0.24
COMMD9-201ENST00000263401 SOX12O15370 315 aa13.54□□□□□ -0.24
COMMD9-201ENST00000263401 CPS1P31327 1500 aa13.54□□□□□ -0.24
COMMD9-201ENST00000263401 WDR63Q8IWG1 891 aa13.54□□□□□ -0.24
COMMD9-201ENST00000263401 THUMPD2Q9BTF0 503 aaKnown RBP13.54□□□□□ -0.24
COMMD9-201ENST00000263401 RIPK4P57078 832 aa13.53□□□□□ -0.24
COMMD9-201ENST00000263401 ADGRB2O60241 1585 aa13.53□□□□□ -0.24
COMMD9-201ENST00000263401 PRKAR2BP31323 418 aa13.53□□□□□ -0.24
COMMD9-201ENST00000263401 EXOSC9Q06265 439 aaKnown RBP13.53□□□□□ -0.24
COMMD9-201ENST00000263401 PHACTR3Q96KR7 559 aa13.53□□□□□ -0.24
COMMD9-201ENST00000263401 ADAMTS13Q76LX8 1427 aa13.52□□□□□ -0.24
COMMD9-201ENST00000263401 NGEFQ8N5V2 710 aa13.52□□□□□ -0.24
COMMD9-201ENST00000263401 BACH2Q9BYV9 841 aa13.52□□□□□ -0.24
COMMD9-201ENST00000263401 LAS1LQ9Y4W2 734 aaKnown RBP13.52□□□□□ -0.25
COMMD9-201ENST00000263401 CCDC27Q2M243 656 aa13.51□□□□□ -0.25
COMMD9-201ENST00000263401 CENPQQ7L2Z9 268 aaPredicted RBP13.51□□□□□ -0.25
COMMD9-201ENST00000263401 ATP7BP35670 1465 aa13.51□□□□□ -0.25
COMMD9-201ENST00000263401 CPSF1Q10570 1443 aaKnown RBP13.51□□□□□ -0.25
COMMD9-201ENST00000263401 LRRC7Q96NW7 1537 aa13.5□□□□□ -0.25
COMMD9-201ENST00000263401 ANP32AP39687 249 aaKnown RBP13.5□□□□□ -0.25
COMMD9-201ENST00000263401 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
COMMD9-201ENST00000263401 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.5□□□□□ -0.25
COMMD9-201ENST00000263401 MED14O60244 1454 aa13.5□□□□□ -0.25
COMMD9-201ENST00000263401 PTPRUQ92729 1446 aa13.5□□□□□ -0.25
COMMD9-201ENST00000263401 PNPLA6Q8IY17 1366 aa13.49□□□□□ -0.25
COMMD9-201ENST00000263401 RSPH6AQ9H0K4 717 aa13.49□□□□□ -0.25
COMMD9-201ENST00000263401 MYH16Q9H6N6 1097 aa13.49□□□□□ -0.25
COMMD9-201ENST00000263401 HDGFP51858 240 aaKnown RBP13.49□□□□□ -0.25
COMMD9-201ENST00000263401 PMFBP1Q8TBY8 1022 aa13.49□□□□□ -0.25
COMMD9-201ENST00000263401 NOP58Q9Y2X3 529 aaKnown RBP13.49□□□□□ -0.25
COMMD9-201ENST00000263401 EDC4Q6P2E9 1401 aaKnown RBP13.48□□□□□ -0.25
COMMD9-201ENST00000263401 C3P01024 1663 aa13.48□□□□□ -0.25
COMMD9-201ENST00000263401 RBM33Q96EV2 1170 aaKnown RBP13.47□□□□□ -0.25
COMMD9-201ENST00000263401 COG3Q96JB2 828 aa13.47□□□□□ -0.25
COMMD9-201ENST00000263401 PCDHB15Q9Y5E8 787 aa13.47□□□□□ -0.25
COMMD9-201ENST00000263401 PDE3AQ14432 1141 aa13.47□□□□□ -0.25
COMMD9-201ENST00000263401 SSH1Q8WYL5 1049 aa13.47□□□□□ -0.25
COMMD9-201ENST00000263401 SMC4Q9NTJ3 1288 aa13.47□□□□□ -0.25
COMMD9-201ENST00000263401 IPO9Q96P70 1041 aaKnown RBP13.47□□□□□ -0.25
COMMD9-201ENST00000263401 AMOTL2Q9Y2J4 779 aa13.47□□□□□ -0.25
COMMD9-201ENST00000263401 ACEP12821 1306 aa13.46□□□□□ -0.25
COMMD9-201ENST00000263401 CDC42BPGQ6DT37 1551 aa13.46□□□□□ -0.25
COMMD9-201ENST00000263401 MS4A1P11836 297 aa13.46□□□□□ -0.25
COMMD9-201ENST00000263401 KNDC1Q76NI1 1749 aa13.46□□□□□ -0.25
COMMD9-201ENST00000263401 TECPR2O15040 1411 aa13.46□□□□□ -0.25
COMMD9-201ENST00000263401 FAM135BQ49AJ0 1406 aa13.46□□□□□ -0.25
COMMD9-201ENST00000263401 FAM83GA6ND36 823 aa13.46□□□□□ -0.26
COMMD9-201ENST00000263401 IL13P35225 146 aa13.46□□□□□ -0.26
COMMD9-201ENST00000263401 ELL2O00472 640 aaPredicted RBP13.45□□□□□ -0.26
COMMD9-201ENST00000263401 DCTN1Q14203 1278 aa13.45□□□□□ -0.26
COMMD9-201ENST00000263401 AEBP1Q8IUX7 1158 aa13.45□□□□□ -0.26
COMMD9-201ENST00000263401 NBR1Q14596 966 aa13.45□□□□□ -0.26
COMMD9-201ENST00000263401 EID1Q9Y6B2 187 aa13.44□□□□□ -0.26
COMMD9-201ENST00000263401 PLEKHG1Q9ULL1 1385 aa13.44□□□□□ -0.26
COMMD9-201ENST00000263401 ITSN1Q15811 1721 aa13.44□□□□□ -0.26
COMMD9-201ENST00000263401 MON2Q7Z3U7 1717 aa13.44□□□□□ -0.26
COMMD9-201ENST00000263401 FER1L4A9Z1Z3 1794 aa13.44□□□□□ -0.26
COMMD9-201ENST00000263401 FCHSD2O94868 740 aa13.44□□□□□ -0.26
COMMD9-201ENST00000263401 AKAP12Q02952 1782 aa13.43□□□□□ -0.26
COMMD9-201ENST00000263401 TTC21BQ7Z4L5 1316 aa13.43□□□□□ -0.26
COMMD9-201ENST00000263401 TRIM27P14373 513 aa13.43□□□□□ -0.26
COMMD9-201ENST00000263401 C8orf34Q49A92 452 aa13.43□□□□□ -0.26
COMMD9-201ENST00000263401 FTSJ3Q8IY81 847 aaKnown RBP13.43□□□□□ -0.26
COMMD9-201ENST00000263401 NOB1Q9ULX3 412 aaKnown RBP13.43□□□□□ -0.26
COMMD9-201ENST00000263401 RGPD8O14715 1765 aaPredicted RBP13.43□□□□□ -0.26
COMMD9-201ENST00000263401 NUTM2GQ5VZR2 741 aa13.42□□□□□ -0.26
COMMD9-201ENST00000263401 TSPYL6Q8N831 410 aa13.42□□□□□ -0.26
COMMD9-201ENST00000263401 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
COMMD9-201ENST00000263401 ZKSCAN2Q63HK3 967 aa13.41□□□□□ -0.26
COMMD9-201ENST00000263401 SLC4A3P48751 1232 aa13.41□□□□□ -0.26
COMMD9-201ENST00000263401 NFE2L2Q16236 605 aa13.41□□□□□ -0.26
COMMD9-201ENST00000263401 HSP90AB2PQ58FF8 381 aa13.41□□□□□ -0.26
COMMD9-201ENST00000263401 ITPRIPQ8IWB1 547 aa13.41□□□□□ -0.26
COMMD9-201ENST00000263401 DZIP1LQ8IYY4 767 aaKnown RBP13.41□□□□□ -0.26
COMMD9-201ENST00000263401 SIRT1Q96EB6 747 aa13.4□□□□□ -0.26
COMMD9-201ENST00000263401 EIF4A2Q14240 407 aaKnown RBP13.4□□□□□ -0.26
COMMD9-201ENST00000263401 DLG5Q8TDM6 1919 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms