RNA–Protein interactions for RNA: ENST00000261226.8

TMCC3-201, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC3, Length 5,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-201ENST00000261226 CCDC66A2RUB6 948 aa16.99■□□□□ 0.31
TMCC3-201ENST00000261226 PDCP20941 246 aa16.99■□□□□ 0.31
TMCC3-201ENST00000261226 KINO60870 393 aaKnown RBP16.98■□□□□ 0.31
TMCC3-201ENST00000261226 CCDC192P0DO97 292 aa16.98■□□□□ 0.31
TMCC3-201ENST00000261226 HSP90B2PQ58FF3 399 aa16.98■□□□□ 0.31
TMCC3-201ENST00000261226 NFXL1Q6ZNB6 911 aa16.98■□□□□ 0.31
TMCC3-201ENST00000261226 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
TMCC3-201ENST00000261226 SMC2O95347 1197 aa16.98■□□□□ 0.31
TMCC3-201ENST00000261226 AQRO60306 1485 aaKnown RBP eCLIP16.98■□□□□ 0.31
TMCC3-201ENST00000261226 C9orf84Q5VXU9 1444 aa16.98■□□□□ 0.31
TMCC3-201ENST00000261226 SYCE3A1L190 88 aa16.98■□□□□ 0.31
TMCC3-201ENST00000261226 GNAI2P04899 355 aa16.98■□□□□ 0.31
TMCC3-201ENST00000261226 TMEM57Q8N5G2 664 aa16.98■□□□□ 0.31
TMCC3-201ENST00000261226 CEBPZQ03701 1054 aaKnown RBP16.98■□□□□ 0.31
TMCC3-201ENST00000261226 DAPK1P53355 1430 aa16.97■□□□□ 0.31
TMCC3-201ENST00000261226 AIMP1Q12904 312 aaKnown RBP16.97■□□□□ 0.31
TMCC3-201ENST00000261226 AFAP1Q8N556 730 aa16.97■□□□□ 0.31
TMCC3-201ENST00000261226 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
TMCC3-201ENST00000261226 NEUROD6Q96NK8 337 aa16.97■□□□□ 0.31
TMCC3-201ENST00000261226 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
TMCC3-201ENST00000261226 TOP2BQ02880 1626 aa16.96■□□□□ 0.31
TMCC3-201ENST00000261226 NCOA1Q15788 1441 aa16.96■□□□□ 0.31
TMCC3-201ENST00000261226 CEP89Q96ST8 783 aa16.96■□□□□ 0.31
TMCC3-201ENST00000261226 OLFM4Q6UX06 510 aa16.96■□□□□ 0.3
TMCC3-201ENST00000261226 CCDC112Q8NEF3 446 aa16.95■□□□□ 0.3
TMCC3-201ENST00000261226 CCDC30Q5VVM6 783 aa16.95■□□□□ 0.3
TMCC3-201ENST00000261226 RALYLQ86SE5 291 aaKnown RBP16.95■□□□□ 0.3
TMCC3-201ENST00000261226 RARSP54136 660 aaKnown RBP16.95■□□□□ 0.3
TMCC3-201ENST00000261226 ANKRD30BQ9BXX2 1392 aa16.94■□□□□ 0.3
TMCC3-201ENST00000261226 NOM1Q5C9Z4 860 aaKnown RBP16.94■□□□□ 0.3
TMCC3-201ENST00000261226 TNMDQ9H2S6 317 aa16.94■□□□□ 0.3
TMCC3-201ENST00000261226 ACBD3Q9H3P7 528 aa16.94■□□□□ 0.3
TMCC3-201ENST00000261226 LRRCC1Q9C099 1032 aa16.94■□□□□ 0.3
TMCC3-201ENST00000261226 RIC3Q7Z5B4 369 aa16.94■□□□□ 0.3
TMCC3-201ENST00000261226 MAP4K4O95819 1239 aaPredicted RBP16.93■□□□□ 0.3
TMCC3-201ENST00000261226 GTF2E1P29083 439 aaPredicted RBP16.93■□□□□ 0.3
TMCC3-201ENST00000261226 SAFBQ15424 915 aaKnown RBP eCLIP16.93■□□□□ 0.3
TMCC3-201ENST00000261226 VPS53Q5VIR6 699 aa16.93■□□□□ 0.3
TMCC3-201ENST00000261226 WASHC4Q2M389 1173 aa16.93■□□□□ 0.3
TMCC3-201ENST00000261226 TNPO1Q92973 898 aaKnown RBP16.93■□□□□ 0.3
TMCC3-201ENST00000261226 PRG4Q92954 1404 aaPredicted RBP16.93■□□□□ 0.3
TMCC3-201ENST00000261226 PATL2C9JE40 543 aaKnown RBP16.93■□□□□ 0.3
TMCC3-201ENST00000261226 CYP46A1Q9Y6A2 500 aa16.93■□□□□ 0.3
TMCC3-201ENST00000261226 KDM4AO75164 1064 aa16.92■□□□□ 0.3
TMCC3-201ENST00000261226 TTLL5Q6EMB2 1281 aa16.92■□□□□ 0.3
TMCC3-201ENST00000261226 TRHP20396 242 aaPredicted RBP16.92■□□□□ 0.3
TMCC3-201ENST00000261226 DUSP27Q5VZP5 1158 aa16.92■□□□□ 0.3
TMCC3-201ENST00000261226 XPCQ01831 940 aaPredicted RBP16.92■□□□□ 0.3
TMCC3-201ENST00000261226 SSFA2P28290 1259 aa16.91■□□□□ 0.3
TMCC3-201ENST00000261226 STK3Q13188 491 aa16.91■□□□□ 0.3
TMCC3-201ENST00000261226 RUFY1Q96T51 708 aa16.91■□□□□ 0.3
TMCC3-201ENST00000261226 KRT85P78386 507 aa16.91■□□□□ 0.3
TMCC3-201ENST00000261226 ARHGAP5Q13017 1502 aa16.91■□□□□ 0.3
TMCC3-201ENST00000261226 NKTRP30414 1462 aaKnown RBP16.91■□□□□ 0.3
TMCC3-201ENST00000261226 CWC15Q9P013 229 aaKnown RBP16.91■□□□□ 0.3
TMCC3-201ENST00000261226 LARP1BQ659C4 914 aaKnown RBP16.9■□□□□ 0.3
TMCC3-201ENST00000261226 AEBP1Q8IUX7 1158 aa16.9■□□□□ 0.3
TMCC3-201ENST00000261226 CCDC47Q96A33 483 aaKnown RBP16.9■□□□□ 0.3
TMCC3-201ENST00000261226 NCAPD3P42695 1498 aa16.9■□□□□ 0.3
TMCC3-201ENST00000261226 NUTM2GQ5VZR2 741 aa16.9■□□□□ 0.3
TMCC3-201ENST00000261226 PRAM1Q96QH2 718 aa16.9■□□□□ 0.3
TMCC3-201ENST00000261226 LRPPRCP42704 1394 aaKnown RBP16.9■□□□□ 0.3
TMCC3-201ENST00000261226 AK7Q96M32 723 aa16.9■□□□□ 0.3
TMCC3-201ENST00000261226 DNAJC2Q99543 621 aaKnown RBP16.9■□□□□ 0.3
TMCC3-201ENST00000261226 TMPOP42166 694 aaKnown RBP16.89■□□□□ 0.29
TMCC3-201ENST00000261226 SUPT6HQ7KZ85 1726 aaKnown RBP16.89■□□□□ 0.29
TMCC3-201ENST00000261226 CCT4P50991 539 aaKnown RBP16.89■□□□□ 0.29
TMCC3-201ENST00000261226 SSH1Q8WYL5 1049 aa16.89■□□□□ 0.29
TMCC3-201ENST00000261226 IGHDP01880 384 aa16.89■□□□□ 0.29
TMCC3-201ENST00000261226 SULT6B1Q6IMI4 303 aa16.89■□□□□ 0.29
TMCC3-201ENST00000261226 PRDM10Q9NQV6 1147 aa16.89■□□□□ 0.29
TMCC3-201ENST00000261226 ERICH2A1L162 156 aa16.88■□□□□ 0.29
TMCC3-201ENST00000261226 STK38Q15208 465 aa16.88■□□□□ 0.29
TMCC3-201ENST00000261226 PDCL2Q8N4E4 241 aa16.88■□□□□ 0.29
TMCC3-201ENST00000261226 PLEKHH2Q8IVE3 1493 aa16.87■□□□□ 0.29
TMCC3-201ENST00000261226 HIP1O00291 1037 aa16.87■□□□□ 0.29
TMCC3-201ENST00000261226 ZNF396Q96N95 335 aaPredicted RBP16.87■□□□□ 0.29
TMCC3-201ENST00000261226 CABP1Q9NZU7 370 aa16.87■□□□□ 0.29
TMCC3-201ENST00000261226 NAP1L1P55209 391 aaKnown RBP16.87■□□□□ 0.29
TMCC3-201ENST00000261226 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
TMCC3-201ENST00000261226 CCP110O43303 1012 aa16.86■□□□□ 0.29
TMCC3-201ENST00000261226 NUP62CLQ9H1M0 184 aa16.86■□□□□ 0.29
TMCC3-201ENST00000261226 ATP2B1P20020 1258 aa16.86■□□□□ 0.29
TMCC3-201ENST00000261226 IL1RAPL2Q9NP60 686 aa16.86■□□□□ 0.29
TMCC3-201ENST00000261226 TROQ12816 1431 aaPredicted RBP16.86■□□□□ 0.29
TMCC3-201ENST00000261226 ME1P48163 572 aa16.86■□□□□ 0.29
TMCC3-201ENST00000261226 FILIP1Q7Z7B0 1213 aa16.86■□□□□ 0.29
TMCC3-201ENST00000261226 RPAP2Q8IXW5 612 aaPredicted RBP16.86■□□□□ 0.29
TMCC3-201ENST00000261226 NLRP6P59044 892 aa16.85■□□□□ 0.29
TMCC3-201ENST00000261226 TBC1D32Q96NH3 1257 aa16.85■□□□□ 0.29
TMCC3-201ENST00000261226 SPATA32Q96LK8 384 aa16.85■□□□□ 0.29
TMCC3-201ENST00000261226 PDCL3Q9H2J4 239 aa16.85■□□□□ 0.29
TMCC3-201ENST00000261226 NSD3Q9BZ95 1437 aa16.85■□□□□ 0.29
TMCC3-201ENST00000261226 PSME1Q06323 249 aa16.85■□□□□ 0.29
TMCC3-201ENST00000261226 UPF3BQ9BZI7 483 aaKnown RBP16.85■□□□□ 0.29
TMCC3-201ENST00000261226 CBX1P83916 185 aa16.85■□□□□ 0.29
TMCC3-201ENST00000261226 CAGE1Q8TC20 777 aa16.85■□□□□ 0.29
TMCC3-201ENST00000261226 SERPINC1P01008 464 aa16.85■□□□□ 0.29
TMCC3-201ENST00000261226 HDGFL1Q5TGJ6 251 aa16.85■□□□□ 0.29
TMCC3-201ENST00000261226 PCF11O94913 1555 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms