RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 FAM161AQ3B820 660 aa14.59□□□□□ -0.07
SLC3A1-201ENST00000260649 C8orf34Q49A92 452 aa14.59□□□□□ -0.07
SLC3A1-201ENST00000260649 CD163L1Q9NR16 1453 aa14.59□□□□□ -0.07
SLC3A1-201ENST00000260649 PLEKHF1Q96S99 279 aa14.58□□□□□ -0.08
SLC3A1-201ENST00000260649 TRIM35Q9UPQ4 493 aa14.58□□□□□ -0.08
SLC3A1-201ENST00000260649 PCDHB15Q9Y5E8 787 aa14.58□□□□□ -0.08
SLC3A1-201ENST00000260649 NME9Q86XW9 330 aa14.58□□□□□ -0.08
SLC3A1-201ENST00000260649 SMC4Q9NTJ3 1288 aa14.58□□□□□ -0.08
SLC3A1-201ENST00000260649 A2ML1A8K2U0 1454 aa14.57□□□□□ -0.08
SLC3A1-201ENST00000260649 USP32Q8NFA0 1604 aa14.57□□□□□ -0.08
SLC3A1-201ENST00000260649 EMILIN1Q9Y6C2 1016 aa14.57□□□□□ -0.08
SLC3A1-201ENST00000260649 FTSJ3Q8IY81 847 aaKnown RBP14.57□□□□□ -0.08
SLC3A1-201ENST00000260649 CCDC27Q2M243 656 aa14.56□□□□□ -0.08
SLC3A1-201ENST00000260649 THUMPD2Q9BTF0 503 aaKnown RBP14.56□□□□□ -0.08
SLC3A1-201ENST00000260649 METP08581 1390 aa14.56□□□□□ -0.08
SLC3A1-201ENST00000260649 PRKAR2BP31323 418 aa14.56□□□□□ -0.08
SLC3A1-201ENST00000260649 RTL5Q5HYW3 569 aaPredicted RBP14.55□□□□□ -0.08
SLC3A1-201ENST00000260649 NINLQ9Y2I6 1382 aa14.55□□□□□ -0.08
SLC3A1-201ENST00000260649 DEKP35659 375 aaKnown RBP14.55□□□□□ -0.08
SLC3A1-201ENST00000260649 POLKQ9UBT6 870 aa14.55□□□□□ -0.08
SLC3A1-201ENST00000260649 RRS1Q15050 365 aaKnown RBP14.55□□□□□ -0.08
SLC3A1-201ENST00000260649 ARHGEF40Q8TER5 1519 aa14.54□□□□□ -0.08
SLC3A1-201ENST00000260649 SOX12O15370 315 aa14.54□□□□□ -0.08
SLC3A1-201ENST00000260649 ZMYM3Q14202 1370 aa14.54□□□□□ -0.08
SLC3A1-201ENST00000260649 CEBPAP49715 358 aaPredicted RBP14.54□□□□□ -0.08
SLC3A1-201ENST00000260649 SSH1Q8WYL5 1049 aa14.54□□□□□ -0.08
SLC3A1-201ENST00000260649 DAXXQ9UER7 740 aaPredicted RBP14.54□□□□□ -0.08
SLC3A1-201ENST00000260649 WASLO00401 505 aaPredicted RBP14.53□□□□□ -0.08
SLC3A1-201ENST00000260649 ELL2O00472 640 aaPredicted RBP14.53□□□□□ -0.08
SLC3A1-201ENST00000260649 ZKSCAN2Q63HK3 967 aa14.53□□□□□ -0.08
SLC3A1-201ENST00000260649 PHACTR3Q96KR7 559 aa14.53□□□□□ -0.08
SLC3A1-201ENST00000260649 ITPRIPQ8IWB1 547 aa14.52□□□□□ -0.08
SLC3A1-201ENST00000260649 NUDT16Q96DE0 195 aaKnown RBP14.52□□□□□ -0.08
SLC3A1-201ENST00000260649 NLRP1Q9C000 1473 aa14.52□□□□□ -0.08
SLC3A1-201ENST00000260649 DZIP1LQ8IYY4 767 aaKnown RBP14.52□□□□□ -0.09
SLC3A1-201ENST00000260649 NEFMP07197 916 aa14.52□□□□□ -0.09
SLC3A1-201ENST00000260649 SEC24BO95487 1268 aa14.51□□□□□ -0.09
SLC3A1-201ENST00000260649 NOB1Q9ULX3 412 aaKnown RBP14.51□□□□□ -0.09
SLC3A1-201ENST00000260649 PPIP5K1Q6PFW1 1433 aa14.51□□□□□ -0.09
SLC3A1-201ENST00000260649 COL3A1P02461 1466 aaPredicted RBP14.51□□□□□ -0.09
SLC3A1-201ENST00000260649 PPP6R1Q9UPN7 881 aa14.51□□□□□ -0.09
SLC3A1-201ENST00000260649 TRIM27P14373 513 aa14.5□□□□□ -0.09
SLC3A1-201ENST00000260649 DDRGK1Q96HY6 314 aa14.5□□□□□ -0.09
SLC3A1-201ENST00000260649 PDZRN3Q9UPQ7 1066 aa14.5□□□□□ -0.09
SLC3A1-201ENST00000260649 MVPQ14764 893 aaKnown RBP14.5□□□□□ -0.09
SLC3A1-201ENST00000260649 SLC26A8Q96RN1 970 aa14.5□□□□□ -0.09
SLC3A1-201ENST00000260649 PMFBP1Q8TBY8 1022 aa14.49□□□□□ -0.09
SLC3A1-201ENST00000260649 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.49□□□□□ -0.09
SLC3A1-201ENST00000260649 RSPH6AQ9H0K4 717 aa14.49□□□□□ -0.09
SLC3A1-201ENST00000260649 BCL11AQ9H165 835 aa14.49□□□□□ -0.09
SLC3A1-201ENST00000260649 COG3Q96JB2 828 aa14.48□□□□□ -0.09
SLC3A1-201ENST00000260649 FCHSD2O94868 740 aa14.47□□□□□ -0.09
SLC3A1-201ENST00000260649 AGLP35573 1532 aa14.47□□□□□ -0.09
SLC3A1-201ENST00000260649 SPATA31D1Q6ZQQ2 1576 aa14.47□□□□□ -0.09
SLC3A1-201ENST00000260649 RWDD1Q9H446 243 aaPredicted RBP14.47□□□□□ -0.09
SLC3A1-201ENST00000260649 DCTN1Q14203 1278 aa14.46□□□□□ -0.09
SLC3A1-201ENST00000260649 TMEM57Q8N5G2 664 aa14.46□□□□□ -0.09
SLC3A1-201ENST00000260649 CCDC61Q9Y6R9 512 aa14.46□□□□□ -0.09
SLC3A1-201ENST00000260649 ADGRB2O60241 1585 aa14.46□□□□□ -0.09
SLC3A1-201ENST00000260649 FAM83GA6ND36 823 aa14.46□□□□□ -0.09
SLC3A1-201ENST00000260649 PNNQ9H307 717 aaKnown RBP14.46□□□□□ -0.09
SLC3A1-201ENST00000260649 TNRQ92752 1358 aa14.46□□□□□ -0.1
SLC3A1-201ENST00000260649 ATF7IPQ6VMQ6 1270 aa14.46□□□□□ -0.1
SLC3A1-201ENST00000260649 PRR36Q9H6K5 1346 aa14.45□□□□□ -0.1
SLC3A1-201ENST00000260649 LTKP29376 864 aa14.45□□□□□ -0.1
SLC3A1-201ENST00000260649 PNPLA6Q8IY17 1366 aa14.45□□□□□ -0.1
SLC3A1-201ENST00000260649 TSPYL6Q8N831 410 aa14.45□□□□□ -0.1
SLC3A1-201ENST00000260649 HDGFP51858 240 aaKnown RBP14.44□□□□□ -0.1
SLC3A1-201ENST00000260649 LRRC7Q96NW7 1537 aa14.44□□□□□ -0.1
SLC3A1-201ENST00000260649 IL13P35225 146 aa14.43□□□□□ -0.1
SLC3A1-201ENST00000260649 NFE2L2Q16236 605 aa14.43□□□□□ -0.1
SLC3A1-201ENST00000260649 MED14O60244 1454 aa14.43□□□□□ -0.1
SLC3A1-201ENST00000260649 KIF20BQ96Q89 1820 aa14.43□□□□□ -0.1
SLC3A1-201ENST00000260649 ROBO2Q9HCK4 1378 aa14.43□□□□□ -0.1
SLC3A1-201ENST00000260649 MAP2P11137 1827 aaKnown RBP14.43□□□□□ -0.1
SLC3A1-201ENST00000260649 CPS1P31327 1500 aa14.42□□□□□ -0.1
SLC3A1-201ENST00000260649 AEBP1Q8IUX7 1158 aa14.42□□□□□ -0.1
SLC3A1-201ENST00000260649 ANKRD26Q9UPS8 1709 aa14.42□□□□□ -0.1
SLC3A1-201ENST00000260649 ATP7BP35670 1465 aa14.42□□□□□ -0.1
SLC3A1-201ENST00000260649 C1orf115Q9H7X2 142 aa14.42□□□□□ -0.1
SLC3A1-201ENST00000260649 EDC4Q6P2E9 1401 aaKnown RBP14.41□□□□□ -0.1
SLC3A1-201ENST00000260649 NRXN3Q9Y4C0 1643 aa14.41□□□□□ -0.1
SLC3A1-201ENST00000260649 REREQ9P2R6 1566 aa14.41□□□□□ -0.1
SLC3A1-201ENST00000260649 DDX19BQ9UMR2 479 aa14.41□□□□□ -0.1
SLC3A1-201ENST00000260649 IL16Q14005 1332 aa14.41□□□□□ -0.1
SLC3A1-201ENST00000260649 CT47B1P0C2W7 299 aaPredicted RBP14.4□□□□□ -0.1
SLC3A1-201ENST00000260649 DLC1Q96QB1 1528 aa14.4□□□□□ -0.1
SLC3A1-201ENST00000260649 CPSF1Q10570 1443 aaKnown RBP14.4□□□□□ -0.1
SLC3A1-201ENST00000260649 TMEM2Q9UHN6 1383 aa14.4□□□□□ -0.1
SLC3A1-201ENST00000260649 SETD1AO15047 1707 aaKnown RBP14.4□□□□□ -0.1
SLC3A1-201ENST00000260649 USP19O94966 1318 aa14.4□□□□□ -0.1
SLC3A1-201ENST00000260649 ACEP12821 1306 aa14.4□□□□□ -0.1
SLC3A1-201ENST00000260649 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
SLC3A1-201ENST00000260649 MBIPQ9NS73 344 aa14.4□□□□□ -0.1
SLC3A1-201ENST00000260649 FAM135BQ49AJ0 1406 aa14.4□□□□□ -0.11
SLC3A1-201ENST00000260649 SULT6B1Q6IMI4 303 aa14.39□□□□□ -0.11
SLC3A1-201ENST00000260649 KIF13AQ9H1H9 1805 aa14.39□□□□□ -0.11
SLC3A1-201ENST00000260649 IPO8O15397 1037 aaKnown RBP14.39□□□□□ -0.11
SLC3A1-201ENST00000260649 KIF16BQ96L93 1317 aa14.38□□□□□ -0.11
SLC3A1-201ENST00000260649 KRT24Q2M2I5 525 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms