RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 MRE11P49959 708 aa18.53■□□□□ 0.56
RIPK1-201ENST00000259808 UGGT2Q9NYU1 1516 aa18.53■□□□□ 0.56
RIPK1-201ENST00000259808 PLEKHH1Q9ULM0 1364 aa18.53■□□□□ 0.56
RIPK1-201ENST00000259808 R3HCC1Q9Y3T6 440 aaKnown RBP18.53■□□□□ 0.56
RIPK1-201ENST00000259808 H3BQV1 296 aa18.52■□□□□ 0.56
RIPK1-201ENST00000259808 IFFO2Q5TF58 517 aa18.52■□□□□ 0.56
RIPK1-201ENST00000259808 DHX29Q7Z478 1369 aaKnown RBP18.52■□□□□ 0.56
RIPK1-201ENST00000259808 PER1O15534 1290 aaPredicted RBP18.52■□□□□ 0.56
RIPK1-201ENST00000259808 TSHZ3Q63HK5 1081 aa18.52■□□□□ 0.56
RIPK1-201ENST00000259808 LARP6Q9BRS8 491 aaKnown RBP18.52■□□□□ 0.56
RIPK1-201ENST00000259808 UPF3BQ9BZI7 483 aaKnown RBP18.52■□□□□ 0.56
RIPK1-201ENST00000259808 ABTB2Q8N961 1025 aa18.52■□□□□ 0.55
RIPK1-201ENST00000259808 XPCQ01831 940 aaPredicted RBP18.51■□□□□ 0.55
RIPK1-201ENST00000259808 SF3A1Q15459 793 aaKnown RBP18.51■□□□□ 0.55
RIPK1-201ENST00000259808 ZNF592Q92610 1267 aa18.51■□□□□ 0.55
RIPK1-201ENST00000259808 GOLGA6L6A8MZA4 724 aa18.51■□□□□ 0.55
RIPK1-201ENST00000259808 FIBPO43427 364 aa18.51■□□□□ 0.55
RIPK1-201ENST00000259808 NUCB2P80303 420 aa18.51■□□□□ 0.55
RIPK1-201ENST00000259808 RBM10P98175 930 aaKnown RBP18.5■□□□□ 0.55
RIPK1-201ENST00000259808 CD109Q6YHK3 1445 aa18.5■□□□□ 0.55
RIPK1-201ENST00000259808 FAM184AQ8NB25 1140 aa18.5■□□□□ 0.55
RIPK1-201ENST00000259808 SMC3Q9UQE7 1217 aa18.5■□□□□ 0.55
RIPK1-201ENST00000259808 LRPPRCP42704 1394 aaKnown RBP18.5■□□□□ 0.55
RIPK1-201ENST00000259808 NRDCO43847 1150 aa18.49■□□□□ 0.55
RIPK1-201ENST00000259808 GPRASP1Q5JY77 1395 aa18.49■□□□□ 0.55
RIPK1-201ENST00000259808 SIL1Q9H173 461 aa18.49■□□□□ 0.55
RIPK1-201ENST00000259808 CARD14Q9BXL6 1004 aa18.49■□□□□ 0.55
RIPK1-201ENST00000259808 ZKSCAN1P17029 563 aaPredicted RBP18.48■□□□□ 0.55
RIPK1-201ENST00000259808 C8orf34Q49A92 452 aa18.48■□□□□ 0.55
RIPK1-201ENST00000259808 NEUROD6Q96NK8 337 aa18.48■□□□□ 0.55
RIPK1-201ENST00000259808 NKTRP30414 1462 aaKnown RBP18.48■□□□□ 0.55
RIPK1-201ENST00000259808 BICD2Q8TD16 824 aa18.47■□□□□ 0.55
RIPK1-201ENST00000259808 GRPEL1Q9HAV7 217 aa18.47■□□□□ 0.55
RIPK1-201ENST00000259808 NLRP2Q9NX02 1062 aa18.47■□□□□ 0.55
RIPK1-201ENST00000259808 TRAPPC8Q9Y2L5 1435 aa18.47■□□□□ 0.55
RIPK1-201ENST00000259808 K7ELQ4 463 aaPredicted RBP18.47■□□□□ 0.55
RIPK1-201ENST00000259808 HDGFL1Q5TGJ6 251 aa18.47■□□□□ 0.55
RIPK1-201ENST00000259808 MAGI3Q5TCQ9 1506 aa18.47■□□□□ 0.55
RIPK1-201ENST00000259808 G3BP1Q13283 466 aaKnown RBP eCLIP18.46■□□□□ 0.55
RIPK1-201ENST00000259808 GCC1Q96CN9 775 aa18.46■□□□□ 0.55
RIPK1-201ENST00000259808 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
RIPK1-201ENST00000259808 CEBPZQ03701 1054 aaKnown RBP18.46■□□□□ 0.55
RIPK1-201ENST00000259808 DISP1Q96F81 1524 aa18.45■□□□□ 0.54
RIPK1-201ENST00000259808 ADGRL1O94910 1474 aa18.45■□□□□ 0.54
RIPK1-201ENST00000259808 NEXNQ0ZGT2 675 aa18.45■□□□□ 0.54
RIPK1-201ENST00000259808 USHBP1Q8N6Y0 703 aa18.45■□□□□ 0.54
RIPK1-201ENST00000259808 PHF14O94880 888 aa18.45■□□□□ 0.54
RIPK1-201ENST00000259808 AAMPQ13685 434 aa18.45■□□□□ 0.54
RIPK1-201ENST00000259808 NFE2L2Q16236 605 aa18.45■□□□□ 0.54
RIPK1-201ENST00000259808 SSFA2P28290 1259 aa18.44■□□□□ 0.54
RIPK1-201ENST00000259808 NUTM1Q86Y26 1132 aa18.44■□□□□ 0.54
RIPK1-201ENST00000259808 ZRANB1Q9UGI0 708 aa18.44■□□□□ 0.54
RIPK1-201ENST00000259808 RIC3Q7Z5B4 369 aa18.44■□□□□ 0.54
RIPK1-201ENST00000259808 FCHSD2O94868 740 aa18.44■□□□□ 0.54
RIPK1-201ENST00000259808 BECN2A8MW95 431 aa18.43■□□□□ 0.54
RIPK1-201ENST00000259808 CDK11BP21127 795 aaKnown RBP18.43■□□□□ 0.54
RIPK1-201ENST00000259808 SYTL4Q96C24 671 aaPredicted RBP18.43■□□□□ 0.54
RIPK1-201ENST00000259808 NUDT16Q96DE0 195 aaKnown RBP18.43■□□□□ 0.54
RIPK1-201ENST00000259808 STK3Q13188 491 aa18.43■□□□□ 0.54
RIPK1-201ENST00000259808 PANK2Q9BZ23 570 aa18.43■□□□□ 0.54
RIPK1-201ENST00000259808 KIF14Q15058 1648 aa18.43■□□□□ 0.54
RIPK1-201ENST00000259808 NOS1P29475 1434 aa18.43■□□□□ 0.54
RIPK1-201ENST00000259808 GNAI2P04899 355 aa18.42■□□□□ 0.54
RIPK1-201ENST00000259808 RAPGEF6Q8TEU7 1601 aa18.42■□□□□ 0.54
RIPK1-201ENST00000259808 TTC5Q8N0Z6 440 aa18.42■□□□□ 0.54
RIPK1-201ENST00000259808 PARD3Q8TEW0 1356 aa18.42■□□□□ 0.54
RIPK1-201ENST00000259808 RABEP1Q15276 862 aa18.42■□□□□ 0.54
RIPK1-201ENST00000259808 KRT24Q2M2I5 525 aa18.42■□□□□ 0.54
RIPK1-201ENST00000259808 GDPD2Q9HCC8 539 aa18.42■□□□□ 0.54
RIPK1-201ENST00000259808 APPP05067 770 aa18.41■□□□□ 0.54
RIPK1-201ENST00000259808 ESCO1Q5FWF5 840 aa18.41■□□□□ 0.54
RIPK1-201ENST00000259808 SLC52A1Q9NWF4 448 aa18.41■□□□□ 0.54
RIPK1-201ENST00000259808 CLASRPQ8N2M8 674 aaKnown RBP18.41■□□□□ 0.54
RIPK1-201ENST00000259808 RUFY2Q8WXA3 655 aa18.41■□□□□ 0.54
RIPK1-201ENST00000259808 RTEL1-TNFRSF6BF6WH68 1400 aa18.41■□□□□ 0.54
RIPK1-201ENST00000259808 FANCAO15360 1455 aa18.4■□□□□ 0.54
RIPK1-201ENST00000259808 SPC24Q8NBT2 197 aa18.4■□□□□ 0.54
RIPK1-201ENST00000259808 STK11IPQ8N1F8 1099 aa18.4■□□□□ 0.54
RIPK1-201ENST00000259808 CWC27Q6UX04 472 aaKnown RBP18.4■□□□□ 0.54
RIPK1-201ENST00000259808 GOLGA6L19H0YKK7 550 aa18.39■□□□□ 0.54
RIPK1-201ENST00000259808 GNAI3P08754 354 aa18.39■□□□□ 0.54
RIPK1-201ENST00000259808 CCDC30Q5VVM6 783 aa18.39■□□□□ 0.54
RIPK1-201ENST00000259808 DNAJC2Q99543 621 aaKnown RBP18.39■□□□□ 0.54
RIPK1-201ENST00000259808 FSD1Q9BTV5 496 aa18.39■□□□□ 0.54
RIPK1-201ENST00000259808 ATP6V1DQ9Y5K8 247 aa18.39■□□□□ 0.54
RIPK1-201ENST00000259808 ADAMTS12P58397 1594 aa18.39■□□□□ 0.53
RIPK1-201ENST00000259808 SRGAP3O43295 1099 aa18.39■□□□□ 0.53
RIPK1-201ENST00000259808 HTATSF1O43719 755 aaKnown RBP18.39■□□□□ 0.53
RIPK1-201ENST00000259808 SYCP2Q9BX26 1530 aa18.39■□□□□ 0.53
RIPK1-201ENST00000259808 TNPO1Q92973 898 aaKnown RBP18.39■□□□□ 0.53
RIPK1-201ENST00000259808 HDAC5Q9UQL6 1122 aa18.39■□□□□ 0.53
RIPK1-201ENST00000259808 CCDC61Q9Y6R9 512 aa18.39■□□□□ 0.53
RIPK1-201ENST00000259808 FAM177BA6PVY3 158 aa18.38■□□□□ 0.53
RIPK1-201ENST00000259808 ERC2O15083 957 aa18.38■□□□□ 0.53
RIPK1-201ENST00000259808 ANXA1P04083 346 aa18.38■□□□□ 0.53
RIPK1-201ENST00000259808 FERMT3Q86UX7 667 aa18.38■□□□□ 0.53
RIPK1-201ENST00000259808 C16orf71Q8IYS4 520 aaPredicted RBP18.38■□□□□ 0.53
RIPK1-201ENST00000259808 WDR62O43379 1518 aa18.38■□□□□ 0.53
RIPK1-201ENST00000259808 MYL6BP14649 208 aa18.38■□□□□ 0.53
RIPK1-201ENST00000259808 ESPNB1AK53 854 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms