RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 IRF7Q92985 503 aa11.55□□□□□ -0.56
TRA2B-201ENST00000259043 BAP1Q92560 729 aa11.54□□□□□ -0.56
TRA2B-201ENST00000259043 PLEKHG3A1L390 1219 aa11.53□□□□□ -0.56
TRA2B-201ENST00000259043 VARSP26640 1264 aaKnown RBP11.53□□□□□ -0.56
TRA2B-201ENST00000259043 GMPRP36959 345 aa11.53□□□□□ -0.56
TRA2B-201ENST00000259043 LINC01559Q495D7 138 aa11.53□□□□□ -0.56
TRA2B-201ENST00000259043 DESI1Q6ICB0 168 aa11.53□□□□□ -0.56
TRA2B-201ENST00000259043 MPNDQ8N594 471 aa11.53□□□□□ -0.56
TRA2B-201ENST00000259043 PRR7Q8TB68 274 aa11.53□□□□□ -0.56
TRA2B-201ENST00000259043 KDM4CQ9H3R0 1056 aa11.53□□□□□ -0.56
TRA2B-201ENST00000259043 SPDYE5A6NIY4 337 aa11.52□□□□□ -0.57
TRA2B-201ENST00000259043 ZNF511Q8NB15 262 aa11.52□□□□□ -0.57
TRA2B-201ENST00000259043 TLL2Q9Y6L7 1015 aa11.52□□□□□ -0.57
TRA2B-201ENST00000259043 H3BM21 787 aa11.51□□□□□ -0.57
TRA2B-201ENST00000259043 GJA5P36382 358 aa11.51□□□□□ -0.57
TRA2B-201ENST00000259043 MTMR2Q13614 643 aa11.51□□□□□ -0.57
TRA2B-201ENST00000259043 ZFP42Q96MM3 310 aa11.51□□□□□ -0.57
TRA2B-201ENST00000259043 DIXDC1Q155Q3 683 aa11.5□□□□□ -0.57
TRA2B-201ENST00000259043 RSBN1LQ6PCB5 846 aaPredicted RBP11.5□□□□□ -0.57
TRA2B-201ENST00000259043 NNTQ13423 1086 aa11.49□□□□□ -0.57
TRA2B-201ENST00000259043 ZSCAN1Q8NBB4 408 aa11.49□□□□□ -0.57
TRA2B-201ENST00000259043 SPTLC1O15269 473 aa11.48□□□□□ -0.57
TRA2B-201ENST00000259043 VEGFBP49765 207 aa11.48□□□□□ -0.57
TRA2B-201ENST00000259043 MYSM1Q5VVJ2 828 aa11.48□□□□□ -0.57
TRA2B-201ENST00000259043 LORP23490 312 aaPredicted RBP11.47□□□□□ -0.57
TRA2B-201ENST00000259043 FAM117AQ9C073 453 aa11.47□□□□□ -0.57
TRA2B-201ENST00000259043 PCDHB15Q9Y5E8 787 aa11.46□□□□□ -0.57
TRA2B-201ENST00000259043 ERBB4Q15303 1308 aa11.45□□□□□ -0.58
TRA2B-201ENST00000259043 SCARF1Q14162 830 aa11.45□□□□□ -0.58
TRA2B-201ENST00000259043 MRPL14Q6P1L8 145 aaKnown RBP11.45□□□□□ -0.58
TRA2B-201ENST00000259043 RIC3Q7Z5B4 369 aa11.45□□□□□ -0.58
TRA2B-201ENST00000259043 LIMD1Q9UGP4 676 aa11.45□□□□□ -0.58
TRA2B-201ENST00000259043 ADH1CP00326 375 aa11.44□□□□□ -0.58
TRA2B-201ENST00000259043 TIMP2P16035 220 aa11.44□□□□□ -0.58
TRA2B-201ENST00000259043 FAM174AQ8TBP5 190 aa11.44□□□□□ -0.58
TRA2B-201ENST00000259043 CTHP32929 405 aa11.43□□□□□ -0.58
TRA2B-201ENST00000259043 WDR4P57081 412 aaKnown RBP11.43□□□□□ -0.58
TRA2B-201ENST00000259043 LYPD8Q6UX82 237 aa11.43□□□□□ -0.58
TRA2B-201ENST00000259043 BRPF1P55201 1214 aaPredicted RBP11.42□□□□□ -0.58
TRA2B-201ENST00000259043 TUSC1Q2TAM9 212 aa11.42□□□□□ -0.58
TRA2B-201ENST00000259043 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
TRA2B-201ENST00000259043 DDRGK1Q96HY6 314 aa11.41□□□□□ -0.58
TRA2B-201ENST00000259043 PURBQ96QR8 312 aaKnown RBP11.41□□□□□ -0.58
TRA2B-201ENST00000259043 KLF16Q9BXK1 252 aaPredicted RBP11.41□□□□□ -0.58
TRA2B-201ENST00000259043 HRCP23327 699 aa11.4□□□□□ -0.58
TRA2B-201ENST00000259043 PRPF38BQ5VTL8 546 aaKnown RBP11.4□□□□□ -0.58
TRA2B-201ENST00000259043 CDK15Q96Q40 435 aa11.4□□□□□ -0.58
TRA2B-201ENST00000259043 NEUROD2Q15784 382 aa11.39□□□□□ -0.59
TRA2B-201ENST00000259043 RSPH6AQ9H0K4 717 aa11.39□□□□□ -0.59
TRA2B-201ENST00000259043 CLK2P49760 499 aaKnown RBP11.38□□□□□ -0.59
TRA2B-201ENST00000259043 QPCTQ16769 361 aa11.38□□□□□ -0.59
TRA2B-201ENST00000259043 CABLES1Q8TDN4 633 aa11.38□□□□□ -0.59
TRA2B-201ENST00000259043 CFAP99D6REC4 459 aa11.37□□□□□ -0.59
TRA2B-201ENST00000259043 SH3D19Q5HYK7 790 aa11.37□□□□□ -0.59
TRA2B-201ENST00000259043 ZBTB3Q9H5J0 574 aa11.37□□□□□ -0.59
TRA2B-201ENST00000259043 LILRB3O75022 631 aa11.36□□□□□ -0.59
TRA2B-201ENST00000259043 F12P00748 615 aaPredicted RBP11.36□□□□□ -0.59
TRA2B-201ENST00000259043 VSIG8P0DPA2 414 aa11.36□□□□□ -0.59
TRA2B-201ENST00000259043 FOXJ1Q92949 421 aa11.36□□□□□ -0.59
TRA2B-201ENST00000259043 POLR3EQ9NVU0 708 aa11.36□□□□□ -0.59
TRA2B-201ENST00000259043 NR5A1Q13285 461 aa11.35□□□□□ -0.59
TRA2B-201ENST00000259043 ARID5BQ14865 1188 aa11.35□□□□□ -0.59
TRA2B-201ENST00000259043 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
TRA2B-201ENST00000259043 CSPP1Q1MSJ5 1256 aa11.35□□□□□ -0.59
TRA2B-201ENST00000259043 MAP10Q9P2G4 905 aa11.35□□□□□ -0.59
TRA2B-201ENST00000259043 SOBPA7XYQ1 873 aa11.34□□□□□ -0.59
TRA2B-201ENST00000259043 ZIC2O95409 532 aaPredicted RBP11.34□□□□□ -0.59
TRA2B-201ENST00000259043 FBXO31Q5XUX0 539 aaPredicted RBP11.33□□□□□ -0.6
TRA2B-201ENST00000259043 ITPKCQ96DU7 683 aa11.33□□□□□ -0.6
TRA2B-201ENST00000259043 ZFAND3Q9H8U3 227 aa11.33□□□□□ -0.6
TRA2B-201ENST00000259043 AGERQ15109 404 aa11.32□□□□□ -0.6
TRA2B-201ENST00000259043 RTL5Q5HYW3 569 aaPredicted RBP11.32□□□□□ -0.6
TRA2B-201ENST00000259043 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRA2B-201ENST00000259043 MAN1A2O60476 641 aa11.31□□□□□ -0.6
TRA2B-201ENST00000259043 BPHLQ86WA6 291 aaPredicted RBP11.31□□□□□ -0.6
TRA2B-201ENST00000259043 PROCA1Q8NCQ7 364 aaPredicted RBP11.31□□□□□ -0.6
TRA2B-201ENST00000259043 NR3C2P08235 984 aa11.3□□□□□ -0.6
TRA2B-201ENST00000259043 GRM5P41594 1212 aa11.3□□□□□ -0.6
TRA2B-201ENST00000259043 C4orf48Q5BLP8 95 aa11.3□□□□□ -0.6
TRA2B-201ENST00000259043 C6orf118Q5T5N4 469 aa11.29□□□□□ -0.6
TRA2B-201ENST00000259043 UPP2O95045 317 aa11.28□□□□□ -0.6
TRA2B-201ENST00000259043 IL27Q8NEV9 243 aa11.28□□□□□ -0.6
TRA2B-201ENST00000259043 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-201ENST00000259043 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-201ENST00000259043 NUTM2DQ5VT03 806 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-201ENST00000259043 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-201ENST00000259043 GOPCQ9HD26 462 aa11.27□□□□□ -0.61
TRA2B-201ENST00000259043 PER1O15534 1290 aaPredicted RBP11.26□□□□□ -0.61
TRA2B-201ENST00000259043 BMP2P12643 396 aa11.26□□□□□ -0.61
TRA2B-201ENST00000259043 LINC00528Q8N1L1 170 aa11.26□□□□□ -0.61
TRA2B-201ENST00000259043 ARMC2Q8NEN0 867 aa11.26□□□□□ -0.61
TRA2B-201ENST00000259043 PPP2R2DQ66LE6 453 aa11.25□□□□□ -0.61
TRA2B-201ENST00000259043 MEIOBQ8N635 442 aa11.25□□□□□ -0.61
TRA2B-201ENST00000259043 PPFIA3O75145 1194 aa11.24□□□□□ -0.61
TRA2B-201ENST00000259043 C1QTNF2Q9BXJ5 285 aa11.24□□□□□ -0.61
TRA2B-201ENST00000259043 SOS2Q07890 1332 aaPredicted RBP11.22□□□□□ -0.61
TRA2B-201ENST00000259043 SH3RF1Q7Z6J0 888 aa11.22□□□□□ -0.61
TRA2B-201ENST00000259043 TSC1Q92574 1164 aa11.22□□□□□ -0.61
TRA2B-201ENST00000259043 MAP4K5Q9Y4K4 846 aa11.22□□□□□ -0.61
TRA2B-201ENST00000259043 FSHRP23945 695 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms