RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 ATP10AO60312 1499 aa5.87□□□□□ -1.47
USP44-201ENST00000258499 MRE11P49959 708 aa5.87□□□□□ -1.47
USP44-201ENST00000258499 CYB5RLQ6IPT4 315 aa5.87□□□□□ -1.47
USP44-201ENST00000258499 API5Q9BZZ5 524 aaKnown RBP5.87□□□□□ -1.47
USP44-201ENST00000258499 TTC37Q6PGP7 1564 aa5.87□□□□□ -1.47
USP44-201ENST00000258499 MAST1Q9Y2H9 1570 aa5.87□□□□□ -1.47
USP44-201ENST00000258499 MCTP1Q6DN14 999 aa5.87□□□□□ -1.47
USP44-201ENST00000258499 TXNDC2Q86VQ3 553 aa5.87□□□□□ -1.47
USP44-201ENST00000258499 LTV1Q96GA3 475 aaPredicted RBP5.87□□□□□ -1.47
USP44-201ENST00000258499 RBM42Q9BTD8 480 aaKnown RBP5.87□□□□□ -1.47
USP44-201ENST00000258499 UGGT1Q9NYU2 1555 aa5.87□□□□□ -1.47
USP44-201ENST00000258499 TRPM1Q7Z4N2 1603 aa5.87□□□□□ -1.47
USP44-201ENST00000258499 USP19O94966 1318 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 RPGRIP1LQ68CZ1 1315 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 FAM83GA6ND36 823 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 CDC45O75419 566 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 FCHSD2O94868 740 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 XRCC6P12956 609 aaKnown RBP eCLIP5.86□□□□□ -1.47
USP44-201ENST00000258499 CCDC27Q2M243 656 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 RILPL2Q969X0 211 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 GRPEL1Q9HAV7 217 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 PTPRTO14522 1441 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 ST18O60284 1047 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 PRKCSHP14314 528 aaPredicted RBP5.86□□□□□ -1.47
USP44-201ENST00000258499 NME9Q86XW9 330 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 TSPYL6Q8N831 410 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 HAP1P54257 671 aaPredicted RBP5.86□□□□□ -1.47
USP44-201ENST00000258499 DNTTIP2Q5QJE6 756 aaKnown RBP5.86□□□□□ -1.47
USP44-201ENST00000258499 SULT6B1Q6IMI4 303 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 OSCARQ8IYS5 282 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 TNPO1Q92973 898 aaKnown RBP5.86□□□□□ -1.47
USP44-201ENST00000258499 GCC1Q96CN9 775 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 TRIM35Q9UPQ4 493 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 ERVK-7P63135 1459 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 ABCC2Q92887 1545 aa5.86□□□□□ -1.47
USP44-201ENST00000258499 ANKRD36BQ8N2N9 1353 aa5.85□□□□□ -1.47
USP44-201ENST00000258499 HDAC1Q13547 482 aaPredicted RBP5.85□□□□□ -1.47
USP44-201ENST00000258499 NFE2L2Q16236 605 aa5.85□□□□□ -1.47
USP44-201ENST00000258499 PHACTR3Q96KR7 559 aa5.85□□□□□ -1.47
USP44-201ENST00000258499 STK31Q9BXU1 1019 aa5.85□□□□□ -1.47
USP44-201ENST00000258499 SLC52A1Q9NWF4 448 aa5.85□□□□□ -1.47
USP44-201ENST00000258499 MIS18AQ9NYP9 233 aa5.85□□□□□ -1.47
USP44-201ENST00000258499 K7ELQ4 463 aaPredicted RBP5.85□□□□□ -1.47
USP44-201ENST00000258499 SMARCA5O60264 1052 aaPredicted RBP5.85□□□□□ -1.47
USP44-201ENST00000258499 HMMRO75330 724 aa5.85□□□□□ -1.47
USP44-201ENST00000258499 OS9Q13438 667 aaPredicted RBP5.85□□□□□ -1.47
USP44-201ENST00000258499 CAVIN1Q6NZI2 390 aaKnown RBP5.85□□□□□ -1.47
USP44-201ENST00000258499 TBC1D9Q6ZT07 1266 aa5.85□□□□□ -1.47
USP44-201ENST00000258499 ZBTB40Q9NUA8 1239 aa5.85□□□□□ -1.47
USP44-201ENST00000258499 ZRANB1Q9UGI0 708 aa5.85□□□□□ -1.47
USP44-201ENST00000258499 CROCC2H7BZ55 1655 aa5.85□□□□□ -1.47
USP44-201ENST00000258499 A0A1W2PP64 1363 aa5.85□□□□□ -1.47
USP44-201ENST00000258499 ATAD2Q6PL18 1390 aa5.85□□□□□ -1.47
USP44-201ENST00000258499 ADCY10Q96PN6 1610 aa5.85□□□□□ -1.47
USP44-201ENST00000258499 SKOR2Q2VWA4 1001 aaPredicted RBP5.85□□□□□ -1.47
USP44-201ENST00000258499 SSFA2P28290 1259 aa5.84□□□□□ -1.47
USP44-201ENST00000258499 DSG3P32926 999 aa5.84□□□□□ -1.47
USP44-201ENST00000258499 AMPHP49418 695 aa5.84□□□□□ -1.47
USP44-201ENST00000258499 NUCB1Q02818 461 aa5.84□□□□□ -1.47
USP44-201ENST00000258499 LMOD2Q6P5Q4 547 aa5.84□□□□□ -1.47
USP44-201ENST00000258499 CD109Q6YHK3 1445 aa5.84□□□□□ -1.47
USP44-201ENST00000258499 POLR1AO95602 1720 aaPredicted RBP5.84□□□□□ -1.47
USP44-201ENST00000258499 MCCP23508 829 aa5.84□□□□□ -1.47
USP44-201ENST00000258499 NASPP49321 788 aaPredicted RBP5.84□□□□□ -1.47
USP44-201ENST00000258499 INTS3Q68E01 1043 aaKnown RBP5.84□□□□□ -1.47
USP44-201ENST00000258499 MCM10Q7L590 875 aa5.84□□□□□ -1.47
USP44-201ENST00000258499 SMC5Q8IY18 1101 aa5.84□□□□□ -1.47
USP44-201ENST00000258499 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.84□□□□□ -1.47
USP44-201ENST00000258499 RRAGDQ9NQL2 400 aaPredicted RBP5.84□□□□□ -1.47
USP44-201ENST00000258499 ERCC6L2Q5T890 1561 aa5.84□□□□□ -1.47
USP44-201ENST00000258499 HSP90AA2PQ14568 343 aaPredicted RBP5.84□□□□□ -1.47
USP44-201ENST00000258499 NGDNQ8NEJ9 315 aaKnown RBP5.84□□□□□ -1.47
USP44-201ENST00000258499 ANO2Q9NQ90 1003 aa5.84□□□□□ -1.47
USP44-201ENST00000258499 MBIPQ9NS73 344 aa5.84□□□□□ -1.47
USP44-201ENST00000258499 RNF216Q9NWF9 866 aaPredicted RBP5.84□□□□□ -1.47
USP44-201ENST00000258499 CFAP65Q6ZU64 1925 aaKnown RBP5.84□□□□□ -1.48
USP44-201ENST00000258499 PREX2Q70Z35 1606 aa5.84□□□□□ -1.48
USP44-201ENST00000258499 RTEL1-TNFRSF6BF6WH68 1400 aa5.84□□□□□ -1.48
USP44-201ENST00000258499 SLC4A2P04920 1241 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 PTMSP20962 102 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 FKBP5Q13451 457 aaPredicted RBP5.83□□□□□ -1.48
USP44-201ENST00000258499 KRT24Q2M2I5 525 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 ALDH1L2Q3SY69 923 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 NUTM2GQ5VZR2 741 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 RNF214Q8ND24 703 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 CFAP44Q96MT7 982 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 TSPYL4Q9UJ04 414 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 ESPNB1AK53 854 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 PRPF40AO75400 957 aaKnown RBP5.83□□□□□ -1.48
USP44-201ENST00000258499 REC8O95072 547 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 BMP2KLQ5H9B9 411 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 C16orf71Q8IYS4 520 aaPredicted RBP5.83□□□□□ -1.48
USP44-201ENST00000258499 C8orf58Q8NAV2 365 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 POLKQ9UBT6 870 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 NCKAP5LQ9HCH0 1330 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 NEK4P51957 841 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 ABCC11Q96J66 1382 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 ASXL2Q76L83 1435 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 F6X3S4 739 aa5.83□□□□□ -1.48
USP44-201ENST00000258499 KCNJ4P48050 445 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms