RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 IFT172Q9UG01 1749 aa18.58■□□□□ 0.56
MSI1-201ENST00000257552 DDX11L8A8MPP1 907 aa18.57■□□□□ 0.56
MSI1-201ENST00000257552 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
MSI1-201ENST00000257552 NGEFQ8N5V2 710 aa18.57■□□□□ 0.56
MSI1-201ENST00000257552 PRAM1Q96QH2 718 aa18.57■□□□□ 0.56
MSI1-201ENST00000257552 KIAA1210Q9ULL0 1709 aa18.56■□□□□ 0.56
MSI1-201ENST00000257552 SLC24A1O60721 1099 aa18.56■□□□□ 0.56
MSI1-201ENST00000257552 ADGRB1O14514 1584 aa18.55■□□□□ 0.56
MSI1-201ENST00000257552 NEURL4Q96JN8 1562 aa18.55■□□□□ 0.56
MSI1-201ENST00000257552 PPLO60437 1756 aa18.55■□□□□ 0.56
MSI1-201ENST00000257552 MVPQ14764 893 aaKnown RBP18.54■□□□□ 0.56
MSI1-201ENST00000257552 RUNDC1Q96C34 613 aa18.54■□□□□ 0.56
MSI1-201ENST00000257552 ZNF692Q9BU19 519 aaPredicted RBP18.54■□□□□ 0.56
MSI1-201ENST00000257552 DIP2BQ9P265 1576 aa18.54■□□□□ 0.56
MSI1-201ENST00000257552 NPC1L1Q9UHC9 1359 aa18.54■□□□□ 0.56
MSI1-201ENST00000257552 EVC2Q86UK5 1308 aa18.54■□□□□ 0.56
MSI1-201ENST00000257552 TNPO1Q92973 898 aaKnown RBP18.54■□□□□ 0.56
MSI1-201ENST00000257552 VIRMAQ69YN4 1812 aaKnown RBP18.53■□□□□ 0.56
MSI1-201ENST00000257552 ESF1Q9H501 851 aaKnown RBP18.53■□□□□ 0.56
MSI1-201ENST00000257552 NEXMIFQ5QGS0 1516 aa18.52■□□□□ 0.56
MSI1-201ENST00000257552 AAMPQ13685 434 aa18.52■□□□□ 0.56
MSI1-201ENST00000257552 DZIP1LQ8IYY4 767 aaKnown RBP18.52■□□□□ 0.56
MSI1-201ENST00000257552 HSP90AB1P08238 724 aaKnown RBP18.51■□□□□ 0.55
MSI1-201ENST00000257552 ZKSCAN2Q63HK3 967 aa18.51■□□□□ 0.55
MSI1-201ENST00000257552 WAPLQ7Z5K2 1190 aa18.51■□□□□ 0.55
MSI1-201ENST00000257552 ARHGAP31Q2M1Z3 1444 aa18.51■□□□□ 0.55
MSI1-201ENST00000257552 SBNO2Q9Y2G9 1366 aa18.51■□□□□ 0.55
MSI1-201ENST00000257552 MTHFSP49914 203 aa18.51■□□□□ 0.55
MSI1-201ENST00000257552 ITPRIPQ8IWB1 547 aa18.51■□□□□ 0.55
MSI1-201ENST00000257552 TSR2Q969E8 191 aaKnown RBP18.51■□□□□ 0.55
MSI1-201ENST00000257552 GGNBP2Q9H3C7 697 aa18.5■□□□□ 0.55
MSI1-201ENST00000257552 GLI2P10070 1586 aa18.49■□□□□ 0.55
MSI1-201ENST00000257552 PIK3C2BO00750 1634 aa18.49■□□□□ 0.55
MSI1-201ENST00000257552 SMC4Q9NTJ3 1288 aa18.48■□□□□ 0.55
MSI1-201ENST00000257552 QRICH2Q9H0J4 1663 aa18.48■□□□□ 0.55
MSI1-201ENST00000257552 SETBP1Q9Y6X0 1596 aa18.48■□□□□ 0.55
MSI1-201ENST00000257552 WDR63Q8IWG1 891 aa18.48■□□□□ 0.55
MSI1-201ENST00000257552 MYO5BQ9ULV0 1848 aa18.47■□□□□ 0.55
MSI1-201ENST00000257552 ZMYM3Q14202 1370 aa18.47■□□□□ 0.55
MSI1-201ENST00000257552 POLR3AO14802 1390 aaPredicted RBP18.47■□□□□ 0.55
MSI1-201ENST00000257552 GBP4Q96PP9 640 aa18.47■□□□□ 0.55
MSI1-201ENST00000257552 KIAA1211Q6ZU35 1233 aa18.46■□□□□ 0.55
MSI1-201ENST00000257552 LNPKQ9C0E8 428 aa18.46■□□□□ 0.55
MSI1-201ENST00000257552 U2AF1L5P0DN76 240 aaPredicted RBP18.45■□□□□ 0.54
MSI1-201ENST00000257552 TRIM27P14373 513 aa18.45■□□□□ 0.54
MSI1-201ENST00000257552 FBLN1P23142 703 aa18.45■□□□□ 0.54
MSI1-201ENST00000257552 U2AF1Q01081 240 aaKnown RBP eCLIP18.45■□□□□ 0.54
MSI1-201ENST00000257552 ISY1Q9ULR0 285 aaKnown RBP18.45■□□□□ 0.54
MSI1-201ENST00000257552 DDIT3P35638 169 aa18.44■□□□□ 0.54
MSI1-201ENST00000257552 TULP4Q9NRJ4 1543 aa18.44■□□□□ 0.54
MSI1-201ENST00000257552 PREX1Q8TCU6 1659 aa18.44■□□□□ 0.54
MSI1-201ENST00000257552 EXOSC9Q06265 439 aaKnown RBP18.43■□□□□ 0.54
MSI1-201ENST00000257552 CD2BP2O95400 341 aaKnown RBP18.43■□□□□ 0.54
MSI1-201ENST00000257552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.43■□□□□ 0.54
MSI1-201ENST00000257552 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
MSI1-201ENST00000257552 CDK19Q9BWU1 502 aa18.43■□□□□ 0.54
MSI1-201ENST00000257552 CABP1Q9NZU7 370 aa18.43■□□□□ 0.54
MSI1-201ENST00000257552 RBM10P98175 930 aaKnown RBP18.42■□□□□ 0.54
MSI1-201ENST00000257552 TPM2P07951 284 aa18.42■□□□□ 0.54
MSI1-201ENST00000257552 RAB3GAP1Q15042 981 aa18.42■□□□□ 0.54
MSI1-201ENST00000257552 A0A1W2PP64 1363 aa18.42■□□□□ 0.54
MSI1-201ENST00000257552 YTHDC2Q9H6S0 1430 aaKnown RBP18.42■□□□□ 0.54
MSI1-201ENST00000257552 NASPP49321 788 aaPredicted RBP18.42■□□□□ 0.54
MSI1-201ENST00000257552 CEBPAP49715 358 aaPredicted RBP18.42■□□□□ 0.54
MSI1-201ENST00000257552 SMC5Q8IY18 1101 aa18.42■□□□□ 0.54
MSI1-201ENST00000257552 SSH1Q8WYL5 1049 aa18.42■□□□□ 0.54
MSI1-201ENST00000257552 RBM42Q9BTD8 480 aaKnown RBP18.42■□□□□ 0.54
MSI1-201ENST00000257552 MYO3AQ8NEV4 1616 aa18.41■□□□□ 0.54
MSI1-201ENST00000257552 HDAC1Q13547 482 aaPredicted RBP18.41■□□□□ 0.54
MSI1-201ENST00000257552 TMEM131LA2VDJ0 1609 aa18.41■□□□□ 0.54
MSI1-201ENST00000257552 U2SURPO15042 1029 aaKnown RBP18.4■□□□□ 0.54
MSI1-201ENST00000257552 SSFA2P28290 1259 aa18.4■□□□□ 0.54
MSI1-201ENST00000257552 TXNDC2Q86VQ3 553 aa18.4■□□□□ 0.54
MSI1-201ENST00000257552 NOB1Q9ULX3 412 aaKnown RBP18.4■□□□□ 0.54
MSI1-201ENST00000257552 RBM25P49756 843 aaKnown RBP18.4■□□□□ 0.54
MSI1-201ENST00000257552 TMEM57Q8N5G2 664 aa18.4■□□□□ 0.54
MSI1-201ENST00000257552 DDX19BQ9UMR2 479 aa18.4■□□□□ 0.54
MSI1-201ENST00000257552 SKOR2Q2VWA4 1001 aaPredicted RBP18.39■□□□□ 0.54
MSI1-201ENST00000257552 SNX21Q969T3 373 aa18.39■□□□□ 0.54
MSI1-201ENST00000257552 ANKRD36BQ8N2N9 1353 aa18.39■□□□□ 0.53
MSI1-201ENST00000257552 CFAP53Q96M91 514 aa18.39■□□□□ 0.53
MSI1-201ENST00000257552 NCKAP5LQ9HCH0 1330 aa18.39■□□□□ 0.53
MSI1-201ENST00000257552 CLTCQ00610 1675 aaKnown RBP18.39■□□□□ 0.53
MSI1-201ENST00000257552 ZC3H13Q5T200 1668 aaKnown RBP18.39■□□□□ 0.53
MSI1-201ENST00000257552 ANP32BQ92688 251 aaKnown RBP18.39■□□□□ 0.53
MSI1-201ENST00000257552 PDCL3Q9H2J4 239 aa18.39■□□□□ 0.53
MSI1-201ENST00000257552 NUTM2FA1L443 756 aa18.38■□□□□ 0.53
MSI1-201ENST00000257552 ATF7IPQ6VMQ6 1270 aa18.38■□□□□ 0.53
MSI1-201ENST00000257552 DDX49Q9Y6V7 483 aaKnown RBP18.38■□□□□ 0.53
MSI1-201ENST00000257552 NCLP19338 710 aaKnown RBP18.38■□□□□ 0.53
MSI1-201ENST00000257552 ARHGEF28Q8N1W1 1705 aaKnown RBP18.38■□□□□ 0.53
MSI1-201ENST00000257552 CCDC173Q0VFZ6 552 aa18.37■□□□□ 0.53
MSI1-201ENST00000257552 CIZ1Q9ULV3 898 aaPredicted RBP18.37■□□□□ 0.53
MSI1-201ENST00000257552 MSNP26038 577 aaKnown RBP18.37■□□□□ 0.53
MSI1-201ENST00000257552 ZSCAN30Q86W11 494 aa18.37■□□□□ 0.53
MSI1-201ENST00000257552 NCOA3Q9Y6Q9 1424 aa18.37■□□□□ 0.53
MSI1-201ENST00000257552 FYB1O15117 783 aa18.36■□□□□ 0.53
MSI1-201ENST00000257552 CCDC27Q2M243 656 aa18.36■□□□□ 0.53
MSI1-201ENST00000257552 RIMS2Q9UQ26 1411 aa18.36■□□□□ 0.53
MSI1-201ENST00000257552 KIF2CQ99661 725 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms