RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 LRP6O75581 1613 aa12.08□□□□□ -0.48
TMEM258-201ENST00000257262 TOPAZ1Q8N9V7 1692 aa12.08□□□□□ -0.48
TMEM258-201ENST00000257262 SPDYE2BA6NHP3 402 aa12.08□□□□□ -0.48
TMEM258-201ENST00000257262 SPDYE6P0CI01 402 aa12.08□□□□□ -0.48
TMEM258-201ENST00000257262 SPDYE2Q495Y8 402 aa12.08□□□□□ -0.48
TMEM258-201ENST00000257262 CABP2Q9NPB3 220 aa12.08□□□□□ -0.48
TMEM258-201ENST00000257262 CCDC61Q9Y6R9 512 aa12.07□□□□□ -0.48
TMEM258-201ENST00000257262 COL22A1Q8NFW1 1626 aaPredicted RBP12.07□□□□□ -0.48
TMEM258-201ENST00000257262 SPATA31A3Q5VYP0 1347 aa12.07□□□□□ -0.48
TMEM258-201ENST00000257262 EVC2Q86UK5 1308 aa12.07□□□□□ -0.48
TMEM258-201ENST00000257262 NGDNQ8NEJ9 315 aaKnown RBP12.06□□□□□ -0.48
TMEM258-201ENST00000257262 RGS17Q9UGC6 210 aaPredicted RBP12.06□□□□□ -0.48
TMEM258-201ENST00000257262 PLEKHG3A1L390 1219 aa12.05□□□□□ -0.48
TMEM258-201ENST00000257262 MEX3CQ5U5Q3 659 aaKnown RBP12.05□□□□□ -0.48
TMEM258-201ENST00000257262 TRPM3Q9HCF6 1732 aaPredicted RBP12.05□□□□□ -0.48
TMEM258-201ENST00000257262 ACEP12821 1306 aa12.05□□□□□ -0.48
TMEM258-201ENST00000257262 PPIP5K1Q6PFW1 1433 aa12.04□□□□□ -0.48
TMEM258-201ENST00000257262 ST20-MTHFSA0A0A6YYL1 179 aa12.04□□□□□ -0.48
TMEM258-201ENST00000257262 SBNO1A3KN83 1393 aa12.04□□□□□ -0.48
TMEM258-201ENST00000257262 SBNO2Q9Y2G9 1366 aa12.04□□□□□ -0.48
TMEM258-201ENST00000257262 TNS3Q68CZ2 1445 aa12.03□□□□□ -0.48
TMEM258-201ENST00000257262 LMOD2Q6P5Q4 547 aa12.03□□□□□ -0.48
TMEM258-201ENST00000257262 CABP1Q9NZU7 370 aa12.03□□□□□ -0.48
TMEM258-201ENST00000257262 ALS2Q96Q42 1657 aa12.03□□□□□ -0.48
TMEM258-201ENST00000257262 POLR3AO14802 1390 aaPredicted RBP12.03□□□□□ -0.48
TMEM258-201ENST00000257262 PAK3O75914 559 aaPredicted RBP12.02□□□□□ -0.49
TMEM258-201ENST00000257262 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
TMEM258-201ENST00000257262 ADAMTS2O95450 1211 aa12.02□□□□□ -0.49
TMEM258-201ENST00000257262 MARF1Q9Y4F3 1742 aaKnown RBP12.02□□□□□ -0.49
TMEM258-201ENST00000257262 CABLES1Q8TDN4 633 aa12.01□□□□□ -0.49
TMEM258-201ENST00000257262 POTEHQ6S545 545 aa12□□□□□ -0.49
TMEM258-201ENST00000257262 POTEAQ6S8J7 498 aa12□□□□□ -0.49
TMEM258-201ENST00000257262 C8orf37Q96NL8 207 aa12□□□□□ -0.49
TMEM258-201ENST00000257262 TESK2Q96S53 571 aa12□□□□□ -0.49
TMEM258-201ENST00000257262 ARHGEF10O15013 1369 aa12□□□□□ -0.49
TMEM258-201ENST00000257262 USP47Q96K76 1375 aa12□□□□□ -0.49
TMEM258-201ENST00000257262 NGLY1Q96IV0 654 aa11.99□□□□□ -0.49
TMEM258-201ENST00000257262 ABCA3Q99758 1704 aa11.99□□□□□ -0.49
TMEM258-201ENST00000257262 AKAP12Q02952 1782 aa11.98□□□□□ -0.49
TMEM258-201ENST00000257262 AFF2P51816 1311 aa11.98□□□□□ -0.49
TMEM258-201ENST00000257262 HAP1P54257 671 aaPredicted RBP11.98□□□□□ -0.49
TMEM258-201ENST00000257262 CHRDL2Q6WN34 429 aa11.98□□□□□ -0.49
TMEM258-201ENST00000257262 REM2Q8IYK8 340 aaPredicted RBP11.98□□□□□ -0.49
TMEM258-201ENST00000257262 ATAD2Q6PL18 1390 aa11.97□□□□□ -0.49
TMEM258-201ENST00000257262 SLC24A1O60721 1099 aa11.97□□□□□ -0.49
TMEM258-201ENST00000257262 ZNF772Q68DY9 489 aaPredicted RBP11.97□□□□□ -0.49
TMEM258-201ENST00000257262 PUS7Q96PZ0 661 aaKnown RBP11.97□□□□□ -0.49
TMEM258-201ENST00000257262 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
TMEM258-201ENST00000257262 CRYBG1Q9Y4K1 1723 aa11.97□□□□□ -0.49
TMEM258-201ENST00000257262 TMF1P82094 1093 aa11.96□□□□□ -0.49
TMEM258-201ENST00000257262 NUTM2GQ5VZR2 741 aa11.96□□□□□ -0.49
TMEM258-201ENST00000257262 ABTB2Q8N961 1025 aa11.96□□□□□ -0.49
TMEM258-201ENST00000257262 TMC1Q8TDI8 760 aa11.96□□□□□ -0.49
TMEM258-201ENST00000257262 SLC12A5Q9H2X9 1139 aa11.96□□□□□ -0.49
TMEM258-201ENST00000257262 USP6P35125 1406 aa11.95□□□□□ -0.5
TMEM258-201ENST00000257262 FNBP4Q8N3X1 1017 aaPredicted RBP11.95□□□□□ -0.5
TMEM258-201ENST00000257262 CPSF1Q10570 1443 aaKnown RBP11.94□□□□□ -0.5
TMEM258-201ENST00000257262 BRD4O60885 1362 aaPredicted RBP11.94□□□□□ -0.5
TMEM258-201ENST00000257262 PHRF1Q9P1Y6 1649 aaKnown RBP11.94□□□□□ -0.5
TMEM258-201ENST00000257262 QTRT2Q9H974 415 aaKnown RBP11.94□□□□□ -0.5
TMEM258-201ENST00000257262 USP21Q9UK80 565 aa11.94□□□□□ -0.5
TMEM258-201ENST00000257262 CD163L1Q9NR16 1453 aa11.94□□□□□ -0.5
TMEM258-201ENST00000257262 MON2Q7Z3U7 1717 aa11.94□□□□□ -0.5
TMEM258-201ENST00000257262 SSH2Q76I76 1423 aa11.94□□□□□ -0.5
TMEM258-201ENST00000257262 KTN1Q86UP2 1357 aaKnown RBP11.93□□□□□ -0.5
TMEM258-201ENST00000257262 EIF4G2P78344 907 aaKnown RBP eCLIP11.93□□□□□ -0.5
TMEM258-201ENST00000257262 NRKQ7Z2Y5 1582 aa11.92□□□□□ -0.5
TMEM258-201ENST00000257262 PLCH1Q4KWH8 1693 aa11.92□□□□□ -0.5
TMEM258-201ENST00000257262 BCL9LQ86UU0 1499 aa11.92□□□□□ -0.5
TMEM258-201ENST00000257262 FAM83GA6ND36 823 aa11.92□□□□□ -0.5
TMEM258-201ENST00000257262 HSPA5P11021 654 aaKnown RBP11.92□□□□□ -0.5
TMEM258-201ENST00000257262 NLRP13Q86W25 1043 aa11.92□□□□□ -0.5
TMEM258-201ENST00000257262 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
TMEM258-201ENST00000257262 TTC21BQ7Z4L5 1316 aa11.91□□□□□ -0.5
TMEM258-201ENST00000257262 PIK3C2AO00443 1686 aa11.91□□□□□ -0.5
TMEM258-201ENST00000257262 RXRBP28702 533 aa11.91□□□□□ -0.5
TMEM258-201ENST00000257262 NLRP6P59044 892 aa11.91□□□□□ -0.5
TMEM258-201ENST00000257262 HDGFL2Q7Z4V5 671 aaPredicted RBP11.91□□□□□ -0.5
TMEM258-201ENST00000257262 SLIT2O94813 1529 aa11.91□□□□□ -0.5
TMEM258-201ENST00000257262 ZC3H6P61129 1189 aaKnown RBP11.9□□□□□ -0.5
TMEM258-201ENST00000257262 CDCA8Q53HL2 280 aa11.9□□□□□ -0.5
TMEM258-201ENST00000257262 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.9□□□□□ -0.5
TMEM258-201ENST00000257262 TERF2IPQ9NYB0 399 aa11.9□□□□□ -0.5
TMEM258-201ENST00000257262 NWD2Q9ULI1 1742 aa11.9□□□□□ -0.5
TMEM258-201ENST00000257262 COL14A1Q05707 1796 aaKnown RBP11.9□□□□□ -0.51
TMEM258-201ENST00000257262 TTC21AQ8NDW8 1320 aa11.89□□□□□ -0.51
TMEM258-201ENST00000257262 GCP02774 474 aa11.89□□□□□ -0.51
TMEM258-201ENST00000257262 UNC5CLQ8IV45 518 aa11.89□□□□□ -0.51
TMEM258-201ENST00000257262 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.89□□□□□ -0.51
TMEM258-201ENST00000257262 TRPC5Q9UL62 973 aaPredicted RBP11.89□□□□□ -0.51
TMEM258-201ENST00000257262 A0A1W2PP64 1363 aa11.89□□□□□ -0.51
TMEM258-201ENST00000257262 NINLQ9Y2I6 1382 aa11.89□□□□□ -0.51
TMEM258-201ENST00000257262 USP19O94966 1318 aa11.88□□□□□ -0.51
TMEM258-201ENST00000257262 ATRNO75882 1429 aa11.88□□□□□ -0.51
TMEM258-201ENST00000257262 RBM6P78332 1123 aaKnown RBP11.88□□□□□ -0.51
TMEM258-201ENST00000257262 BTG4Q9NY30 223 aa11.88□□□□□ -0.51
TMEM258-201ENST00000257262 KIAA0232Q92628 1395 aa11.88□□□□□ -0.51
TMEM258-201ENST00000257262 MYOM1P52179 1685 aa11.87□□□□□ -0.51
TMEM258-201ENST00000257262 CHRNA2Q15822 529 aa11.87□□□□□ -0.51
TMEM258-201ENST00000257262 PRDM11Q9NQV5 511 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms