RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 ITSN1Q15811 1721 aa25.31■■□□□ 1.64
SNRPA1-201ENST00000254193 USP21Q9UK80 565 aa25.3■■□□□ 1.64
SNRPA1-201ENST00000254193 TRPM3Q9HCF6 1732 aaPredicted RBP25.29■■□□□ 1.64
SNRPA1-201ENST00000254193 QTRT2Q9H974 415 aaKnown RBP25.29■■□□□ 1.64
SNRPA1-201ENST00000254193 SOCS7O14512 581 aa25.28■■□□□ 1.64
SNRPA1-201ENST00000254193 ABTB2Q8N961 1025 aa25.27■■□□□ 1.64
SNRPA1-201ENST00000254193 TMC1Q8TDI8 760 aa25.26■■□□□ 1.63
SNRPA1-201ENST00000254193 RXRBP28702 533 aa25.25■■□□□ 1.63
SNRPA1-201ENST00000254193 USP6P35125 1406 aa25.25■■□□□ 1.63
SNRPA1-201ENST00000254193 ZNF692Q9BU19 519 aaPredicted RBP25.24■■□□□ 1.63
SNRPA1-201ENST00000254193 ALS2Q96Q42 1657 aa25.23■■□□□ 1.63
SNRPA1-201ENST00000254193 SLC24A1O60721 1099 aa25.23■■□□□ 1.63
SNRPA1-201ENST00000254193 PUS7Q96PZ0 661 aaKnown RBP25.23■■□□□ 1.63
SNRPA1-201ENST00000254193 SLC12A5Q9H2X9 1139 aa25.23■■□□□ 1.63
SNRPA1-201ENST00000254193 FAM83GA6ND36 823 aa25.22■■□□□ 1.63
SNRPA1-201ENST00000254193 BCL9LQ86UU0 1499 aa25.21■■□□□ 1.63
SNRPA1-201ENST00000254193 BRD4O60885 1362 aaPredicted RBP25.21■■□□□ 1.63
SNRPA1-201ENST00000254193 TRPC5Q9UL62 973 aaPredicted RBP25.21■■□□□ 1.63
SNRPA1-201ENST00000254193 TMF1P82094 1093 aa25.2■■□□□ 1.62
SNRPA1-201ENST00000254193 CPSF1Q10570 1443 aaKnown RBP25.2■■□□□ 1.62
SNRPA1-201ENST00000254193 SSH2Q76I76 1423 aa25.2■■□□□ 1.62
SNRPA1-201ENST00000254193 TTC21BQ7Z4L5 1316 aa25.19■■□□□ 1.62
SNRPA1-201ENST00000254193 RBM6P78332 1123 aaKnown RBP25.19■■□□□ 1.62
SNRPA1-201ENST00000254193 UNC5CLQ8IV45 518 aa25.19■■□□□ 1.62
SNRPA1-201ENST00000254193 SLIT2O94813 1529 aa25.18■■□□□ 1.62
SNRPA1-201ENST00000254193 NLRP13Q86W25 1043 aa25.18■■□□□ 1.62
SNRPA1-201ENST00000254193 KTN1Q86UP2 1357 aaKnown RBP25.18■■□□□ 1.62
SNRPA1-201ENST00000254193 NLRP6P59044 892 aa25.17■■□□□ 1.62
SNRPA1-201ENST00000254193 ZC3H6P61129 1189 aaKnown RBP25.17■■□□□ 1.62
SNRPA1-201ENST00000254193 USP19O94966 1318 aa25.16■■□□□ 1.62
SNRPA1-201ENST00000254193 ATRNO75882 1429 aa25.16■■□□□ 1.62
SNRPA1-201ENST00000254193 PRDM11Q9NQV5 511 aa25.16■■□□□ 1.62
SNRPA1-201ENST00000254193 HDGFL2Q7Z4V5 671 aaPredicted RBP25.15■■□□□ 1.62
SNRPA1-201ENST00000254193 TERF2IPQ9NYB0 399 aa25.14■■□□□ 1.62
SNRPA1-201ENST00000254193 KIAA0232Q92628 1395 aa25.14■■□□□ 1.61
SNRPA1-201ENST00000254193 CD163L1Q9NR16 1453 aa25.14■■□□□ 1.61
SNRPA1-201ENST00000254193 CHRNA2Q15822 529 aa25.13■■□□□ 1.61
SNRPA1-201ENST00000254193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.13■■□□□ 1.61
SNRPA1-201ENST00000254193 BTG4Q9NY30 223 aa25.13■■□□□ 1.61
SNRPA1-201ENST00000254193 ABCA3Q99758 1704 aa25.12■■□□□ 1.61
SNRPA1-201ENST00000254193 GCP02774 474 aa25.12■■□□□ 1.61
SNRPA1-201ENST00000254193 EIF4G2P78344 907 aaKnown RBP eCLIP25.12■■□□□ 1.61
SNRPA1-201ENST00000254193 TTC21AQ8NDW8 1320 aa25.12■■□□□ 1.61
SNRPA1-201ENST00000254193 HSPA5P11021 654 aaKnown RBP25.11■■□□□ 1.61
SNRPA1-201ENST00000254193 GJD4Q96KN9 370 aaPredicted RBP25.11■■□□□ 1.61
SNRPA1-201ENST00000254193 A0A1W2PP64 1363 aa25.1■■□□□ 1.61
SNRPA1-201ENST00000254193 CDCA8Q53HL2 280 aa25.1■■□□□ 1.61
SNRPA1-201ENST00000254193 NINLQ9Y2I6 1382 aa25.09■■□□□ 1.61
SNRPA1-201ENST00000254193 VPS72Q15906 364 aa25.09■■□□□ 1.61
SNRPA1-201ENST00000254193 MARF1Q9Y4F3 1742 aaKnown RBP25.09■■□□□ 1.61
SNRPA1-201ENST00000254193 NME9Q86XW9 330 aa25.08■■□□□ 1.61
SNRPA1-201ENST00000254193 ZRANB1Q9UGI0 708 aa25.08■■□□□ 1.61
SNRPA1-201ENST00000254193 CCDC9Q9Y3X0 531 aaKnown RBP25.08■■□□□ 1.61
SNRPA1-201ENST00000254193 CDK12Q9NYV4 1490 aaPredicted RBP25.08■■□□□ 1.6
SNRPA1-201ENST00000254193 RGS12O14924 1447 aa25.07■■□□□ 1.6
SNRPA1-201ENST00000254193 CRYBG1Q9Y4K1 1723 aa25.06■■□□□ 1.6
SNRPA1-201ENST00000254193 ZBTB7CA1YPR0 619 aa25.05■■□□□ 1.6
SNRPA1-201ENST00000254193 CPDO75976 1380 aa25.05■■□□□ 1.6
SNRPA1-201ENST00000254193 EDC4Q6P2E9 1401 aaKnown RBP25.04■■□□□ 1.6
SNRPA1-201ENST00000254193 SOX12O15370 315 aa25.04■■□□□ 1.6
SNRPA1-201ENST00000254193 NRKQ7Z2Y5 1582 aa25.03■■□□□ 1.6
SNRPA1-201ENST00000254193 PHRF1Q9P1Y6 1649 aaKnown RBP25.03■■□□□ 1.6
SNRPA1-201ENST00000254193 AKAP12Q02952 1782 aa25.03■■□□□ 1.6
SNRPA1-201ENST00000254193 PIK3C2AO00443 1686 aa25.02■■□□□ 1.6
SNRPA1-201ENST00000254193 POLR3GLQ9BT43 218 aa25.02■■□□□ 1.6
SNRPA1-201ENST00000254193 ANKRD36BQ8N2N9 1353 aa25.02■■□□□ 1.6
SNRPA1-201ENST00000254193 STRN4Q9NRL3 753 aa25.01■■□□□ 1.59
SNRPA1-201ENST00000254193 COL14A1Q05707 1796 aaKnown RBP25■■□□□ 1.59
SNRPA1-201ENST00000254193 KCNH5Q8NCM2 988 aa25■■□□□ 1.59
SNRPA1-201ENST00000254193 USP31Q70CQ4 1352 aa25■■□□□ 1.59
SNRPA1-201ENST00000254193 SLIT3O75094 1523 aa25■■□□□ 1.59
SNRPA1-201ENST00000254193 PLCH1Q4KWH8 1693 aa25■■□□□ 1.59
SNRPA1-201ENST00000254193 EVA1CP58658 441 aa24.98■■□□□ 1.59
SNRPA1-201ENST00000254193 MON2Q7Z3U7 1717 aa24.98■■□□□ 1.59
SNRPA1-201ENST00000254193 ARHGEF25Q86VW2 580 aa24.97■■□□□ 1.59
SNRPA1-201ENST00000254193 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.97■■□□□ 1.59
SNRPA1-201ENST00000254193 GLI3P10071 1580 aa24.97■■□□□ 1.59
SNRPA1-201ENST00000254193 SPATA31A5Q5VU36 1347 aa24.96■■□□□ 1.59
SNRPA1-201ENST00000254193 SPATA31A7Q8IWB4 1347 aa24.96■■□□□ 1.59
SNRPA1-201ENST00000254193 NWD2Q9ULI1 1742 aa24.96■■□□□ 1.59
SNRPA1-201ENST00000254193 FAM98CQ17RN3 349 aaKnown RBP24.95■■□□□ 1.58
SNRPA1-201ENST00000254193 SEPT12Q8IYM1 358 aa24.95■■□□□ 1.58
SNRPA1-201ENST00000254193 CAMTA1Q9Y6Y1 1673 aa24.94■■□□□ 1.58
SNRPA1-201ENST00000254193 AATKQ6ZMQ8 1374 aa24.94■■□□□ 1.58
SNRPA1-201ENST00000254193 C11orf95C9JLR9 678 aaPredicted RBP24.94■■□□□ 1.58
SNRPA1-201ENST00000254193 ONECUT3O60422 494 aaPredicted RBP24.94■■□□□ 1.58
SNRPA1-201ENST00000254193 LARP1Q6PKG0 1096 aaKnown RBP24.94■■□□□ 1.58
SNRPA1-201ENST00000254193 CARD14Q9BXL6 1004 aa24.93■■□□□ 1.58
SNRPA1-201ENST00000254193 AXIN2Q9Y2T1 843 aa24.93■■□□□ 1.58
SNRPA1-201ENST00000254193 NRAPQ86VF7 1730 aa24.92■■□□□ 1.58
SNRPA1-201ENST00000254193 SPATA31A1Q5TZJ5 1347 aa24.91■■□□□ 1.58
SNRPA1-201ENST00000254193 A0A0G2JS52 829 aa24.91■■□□□ 1.58
SNRPA1-201ENST00000254193 MYT1Q01538 1121 aa24.91■■□□□ 1.58
SNRPA1-201ENST00000254193 COG3Q96JB2 828 aa24.91■■□□□ 1.58
SNRPA1-201ENST00000254193 USP35Q9P2H5 1018 aa24.91■■□□□ 1.58
SNRPA1-201ENST00000254193 OVOS2A0A0J9YW53 1432 aa24.9■■□□□ 1.58
SNRPA1-201ENST00000254193 OVOS2Q6IE36 1432 aa24.9■■□□□ 1.58
SNRPA1-201ENST00000254193 FYB1O15117 783 aa24.9■■□□□ 1.58
SNRPA1-201ENST00000254193 UPF1Q92900 1129 aaKnown RBP eCLIP24.9■■□□□ 1.58
SNRPA1-201ENST00000254193 GGNBP2Q9H3C7 697 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms